; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G006400 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G006400
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S acidic ribosomal protein P3
Genome locationGy14Chr2:4747708..4750344
RNA-Seq ExpressionCsGy2G006400
SyntenyCsGy2G006400
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]6.73e-71100Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]7.01e-6695.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]6.67e-6286.78Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TP+SAVFQVI+GG SGGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_023537756.1 60S acidic ribosomal protein P3 [Cucurbita pepo subsp. pepo]1.98e-5684.3Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVCR SGG+WTANQYSGDLEGSA STY+LQRKLV SALSVDSSGGVQSSFS+++PSSAVFQVI+GG SGGG  +GG AAAAPAGGAAPAA EAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
          KEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]7.48e-6695.08Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF-SAGGGAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF   GGGAAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF-SAGGGAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein3.26e-71100Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-23.40e-6695.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-23.40e-6695.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like3.23e-6286.78Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TP+SAVFQVI+GG SGGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like3.23e-6286.78Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TP+SAVFQVI+GG SGGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

SwissProt top hitse value%identityAlignment
O01725 60S acidic ribosomal protein P25.2e-0466.67Show/hide
Query:  SGGGF--SAGGGAAAAPAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD
        SGGG   +AGGG AAA  GGAAPAA E   EKKEE +EESDD D+G  LFD
Subjt:  SGGGF--SAGGGAAAAPAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD

O24413 60S acidic ribosomal protein P31.4e-2860.98Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF--SAGGGAAAAPAGGAAPAAAEA
        MGV+TFVCR++GG+WTA Q+SG++E SA + YELQR+LV +A + DS  GVQSSFS +TPSSAVFQVIVG   GG    S GGG  AA +GG   AAAEA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF--SAGGGAAAAPAGGAAPAAAEA

Query:  PAEKKEEVKEESDDEDLGLSLFD
        P E+K+E ++E  D+D+G SLFD
Subjt:  PAEKKEEVKEESDDEDLGLSLFD

P56724 60S acidic ribosomal protein P31.0e-2864.46Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGV+TFVCRSSG +WTA Q  G+LE SA + YELQR+LV +A + DS+ GVQSSFS ++PSSAVFQVI+ G  GGG + GGGAAA  A G A A A    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEE KEES+D DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-29.1e-3365.83Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGGAAA   GG   AAA    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-12.9e-3167.21Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGFSAGG   AA +GG A  AA AP 
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDE--DLGLSLF
        E  E+ KEES++E  D G  LF
Subjt:  EKKEEVKEESDDE--DLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family2.1e-3267.21Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGFSAGG   AA +GG A  AA AP 
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDE--DLGLSLF
        E  E+ KEES++E  D G  LF
Subjt:  EKKEEVKEESDDE--DLGLSLF

AT5G57290.1 60S acidic ribosomal protein family6.5e-3465.83Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGGAAA   GG   AAA    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family8.2e-2974.39Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGG
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGG
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGG

AT5G57290.3 60S acidic ribosomal protein family1.2e-3265.83Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGGAAA   GG   AAA    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGTAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCTGACTCCACCTACGAGCTCCAGAGGAA
ACTCGTTCAATCTGCTCTCTCCGTCGATTCCTCTGGTGGCGTTCAGTCCTCCTTCTCCTTCATTACTCCTTCCTCCGCCGTTTTTCAGGTGATTGTTGGCGGTGGAAGTG
GTGGCGGTTTCAGTGCTGGTGGTGGAGCTGCAGCTGCCCCTGCTGGAGGAGCTGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGT
GATGATGAAGATCTTGGCCTATCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
AAAATGAAAGTAAGTATAGGAGGGTAAATCAGTCATTTAACAAAAGCAAACCCTCGTTTTCATCTCTCGCTAGGGTTTCATCTGCCAACATAAAAACCAAACACAATCCG
TAGAAGAGAGCCGTCCACTCCAAACTCACTCCTTCATTCTCTTCAACCCAAATCCCCCATTCCATCATCAAACCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCT
CCGGTGGTAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCTGACTCCACCTACGAGCTCCAGAGGAAACTCGTTCAATCTGCTCTCTCCGTCGATTCC
TCTGGTGGCGTTCAGTCCTCCTTCTCCTTCATTACTCCTTCCTCCGCCGTTTTTCAGGTGATTGTTGGCGGTGGAAGTGGTGGCGGTTTCAGTGCTGGTGGTGGAGCTGC
AGCTGCCCCTGCTGGAGGAGCTGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGTGATGATGAAGATCTTGGCCTATCACTTTTTG
ATTAGATTGGTATTTTAATTACTCGTTATTGTTTTTTTTCAACCTAAGAGTTTGTAGCACTAAGGTTTTCTTTTCTGGAAATTATGTCTATGCATTTACTTGAATTTGCA
AGTTCAGTTGATGTTCTTGTTTAAGGACGTAAATTTTGTTACTGACCCTTGTCAAATGGTTGAGAATTAGATATGTTATTTTGTTATTTCGTTTGGGAAGTTACTTCTGA
TTTCACCATCATAGATTTTATCTATTTGTTGTTAGAGGAGATTCTAGGCCATGGTGGTTAATTGTTTTTCTTTCTAACTATGAGTAGAGAATGAGAATTTGAACCTTAAT
TTGTCCTTTTGATCTTTTAACTCTACATATTGATTGATGGAAAAGAAACAAATCTGGTTAAAACTTTTTTCATGGTTGTCAATGACTGTTATCTAATCAATTACAACTAC
TTGATGAGGTAGCACTTTTATTCTTCAAATGGAACGAACCAATTTCCAATTCTGTGTGCTTGGTTTTTTCACATCTATTCTTCGACTTGAATGGTGTTTTTGTTTTCCAC
AAAAATAGGCTTAGCTTCTAAAGATTGGTTTTAGGGTCTTTTGAGGGTTAGGGGGTGGATCCATAGGAAGAAATGCTTTTTTTCGTTTTTCTATAATTTAAGATAAGATT
GTCCAAACCACTCAAGTTGTTGAGAATGGTTGGGCAAACAAATTCGTGCTGACCAATTTTCTTATACCAAAATAGATATCTAATATTTTCTGTCATCATGATTTGTAATA
TCTGATACATTGTTCTTTTATCTTCAAAGGAATAATGGCTTTACCAAAATCGATTATTTGCAAACATAGTTTGCTAATGAGAGAATGATTCCCCTTGCTTAATCAATGAA
ATTGAGTTGATCAGTTTGTTTTCCTCATCGTCTTCCTCGTTTCAACTTATGTTCACTGTGTCTCGTCTACAACATTTTGAAAATCTCACCAAATTCATTGGTCTTTATTT
GTTTTTAAAGTATAAAATTCTTAAATGACATTCAATGTAGTTGAGAGTACACTAGACTTGGTTTTATTTATGGGTGAGCATGATACACCGAAAAATTAAGTCAACTAATC
AAACTAAAGTTTGTCGGTCGGAAAATAAGAGGGGTTGGTTTTAGAAAGTTTTATATCGAAAATTTCTAAAAAGCATTTTTAAGTGAAAATTTCTAAAAAGTATTTCTAGG
TGAAAATTTCCAAAAAGTATTTCTTAGTGTTAAACTAAACTGACCGATCGACTGATCCTACTCATCGATATTGGAACTGGTTTGAACATTCACTAAACTGATCAAATCGA
CTATAGTCAGTTTGCTACTGATTTTTATCAGAAAAATCAACCAACGATCACTTTTAGTTTTATCACATCATATATTGGCTGATTTGGATAATGCTTTCTTCAAGAATCGA
TTTAAGGATTTAAAATTAGGGTTAAGACTTAATGTCATATGAAGATATTTTGCTCTCTTTATTGATTACTACTGTGGACAT
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPAEKKEEVKEES
DDEDLGLSLFD