; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G010120 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G010120
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L23
Genome locationGy14Chr2:9844586..9847108
RNA-Seq ExpressionCsGy2G010120
SyntenyCsGy2G010120
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR036853 - Ribosomal protein L14 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5465864.1 hypothetical protein F2P56_015831 [Juglans regia]6.93e-6693.52Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFLLVV
         ++  L++
Subjt:  IYIFLLVV

KDO43341.1 hypothetical protein CISIN_1g032476mg [Citrus sinensis]8.19e-6694.39Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFLLV
         Y F ++
Subjt:  IYIFLLV

KZN07895.1 hypothetical protein DCAR_000564 [Daucus carota subsp. sativus]2.35e-6698.08Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIF
        I IF
Subjt:  IYIF

TQE09579.1 hypothetical protein C1H46_004798 [Malus baccata]7.67e-6798.1Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFL
         Y FL
Subjt:  IYIFL

XP_015887784.1 60S ribosomal protein L23 [Ziziphus jujuba]5.27e-6696.23Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFLL
           FL+
Subjt:  IYIFLL

TrEMBL top hitse value%identityAlignment
A0A067DXJ4 Uncharacterized protein3.96e-6694.39Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFLLV
         Y F ++
Subjt:  IYIFLLV

A0A0S3SRL1 Uncharacterized protein5.73e-6688.6Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGV+MYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFLLVVDKPPSY
         +I ++ + +   Y
Subjt:  IYIFLLVVDKPPSY

A0A166FKP1 Uncharacterized protein1.14e-6698.08Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIF
        I IF
Subjt:  IYIF

A0A540NEW8 Uncharacterized protein3.71e-6798.1Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFL
         Y FL
Subjt:  IYIFL

A0A6P4A2P7 60S ribosomal protein L232.55e-6696.23Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  IYIFLL
           FL+
Subjt:  IYIFLL

SwissProt top hitse value%identityAlignment
P49690 60S ribosomal protein L238.1e-5097.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q07760 60S ribosomal protein L234.7e-5096.97Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q3T057 60S ribosomal protein L234.8e-4284.85Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q6PC14 60S ribosomal protein L232.1e-4285.86Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q9XEK8 60S ribosomal protein L231.7e-4488.89Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein5.7e-5197.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

AT2G33370.1 Ribosomal protein L14p/L23e family protein5.7e-5197.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

AT3G04400.1 Ribosomal protein L14p/L23e family protein5.7e-5197.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

AT3G04400.2 Ribosomal protein L14p/L23e family protein4.4e-43100Show/hide
Query:  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

ATCG00780.1 ribosomal protein L141.4e-0433.77Show/hide
Query:  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFE
        +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIVR  K  +R +G  + ++
Subjt:  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCGAGGGCGCGGAGGATCTGCTGGTAACAAGTTCAGGATGTCACTGGGTCTACCGGTGGCAGCGACCGTCAATTGTGCCGACAACACGGGAGCCAAGAACTT
GTACATCATCTCAGTTAAGGGTATCAAGGGGCGTCTGAACAGATTGCCATCGGCTTGTGTGGGTGATATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGA
AGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTTATGTACTTCGAAGGTATCTATATTTTTCTATTGGTAGTTGATAAG
CCTCCAAGTTACTTGTTTTCCATAAGAAGCTTTATGATACAGATGTTTGAACTTGATCTGTCTTTTATTTTTTCGCTGAAAGAGAGATGTAATTCATGGTTTTTGTCTCT
GAACTATTATTTGACCGGATCTTCTGTGTAG
mRNA sequenceShow/hide mRNA sequence
CCCATCTCTATATAAATCACCACAAAACCCTACTTTTCTCTCAGTTTCTCGTTTTAGCCGGCGAAAATGTCGAAGCGAGGGCGCGGAGGATCTGCTGGTAACAAGTTCAG
GATGTCACTGGGTCTACCGGTGGCAGCGACCGTCAATTGTGCCGACAACACGGGAGCCAAGAACTTGTACATCATCTCAGTTAAGGGTATCAAGGGGCGTCTGAACAGAT
TGCCATCGGCTTGTGTGGGTGATATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGAAGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGG
CGGCGAAAGGATGGGGTTTTTATGTACTTCGAAGGTATCTATATTTTTCTATTGGTAGTTGATAAGCCTCCAAGTTACTTGTTTTCCATAAGAAGCTTTATGATACAGAT
GTTTGAACTTGATCTGTCTTTTATTTTTTCGCTGAAAGAGAGATGTAATTCATGGTTTTTGTCTCTGAACTATTATTTGACCGGATCTTCTGTGTAGTTGAACTTTATTT
TGTTTTTAGGCATTTTGTTATTACTTGTATACCAGACCAAGTTTTGGTATCCTCCTTGTTGCAATGGTTGATACATTTACGAGTCTGGTAAATTGACTTTGTTCATCGTT
GCAGATATGTAGAAGATGCTCATTGAAGTTTTGATGATGCTCATTGAAGTTTTGATGATGCTCATTGAAGTTTTGATGATGCTCATTGAAGTTTTGATGATGCTCATTGA
AGTTTTGGTGATGCTCATTGAAGTTTTGATGATGCTCATTGAAGCTTTGATGATGCTCATATGTGCTTGATGTGAACAAAACATTGTTTATTTAGTTCTTGTTTCATCCT
TTATCTTATTCTGGCGTCTAGTATAAGTCATCTGCGGTTAATAGATCTCTTATCTATGGAAATTTTGTTTTATTTTAGTACAATTTTTTAATTTTGAAGTATATTCTGTT
TATAGGCATTTTGTTATTACTGGGTTCCTTGCTGAATTGTAGTTGTTTGCATTTGTTCTAACCTGAGAATTTCATGATTAACATGTATTTTGGAAGCTAGATAGTTGTTG
TCACTGTCAGTCGATTTATATTCCATATCTAAATTGGTTCTGTGAGGATTAAATATTAAACAGTTCCAAGATTTGAGTTTCGTAGATGTTCATTCACTGGCCAAATGGCA
AACTAGAGTATCTCTTTTTAGACAAATTATGAAGCATTGTTTTTTTTTGTGAAAAAAATTGTTCACAAAAATGGTGTGGTTTTTTTTTTCTACTTGAATTTTATAGTTGG
GAAGGGTCGTTGGTCTGAGTTAACCATAAATGCGTCCCCGGGTACACAATTATAATTGAAGCTTAGTTTTGTCAAGTTAGCAATTGGTTTTCTGTTGAATTGTGATTAAA
AGGTGCCTAAGTCTGCCGCTTGGCTCCATCTATATCCCAGACGTAAACTCGGTATCCTCCTTGTTGCAATGGTTGATACATTACATGTCTGGTAAATTGACTTTGTTCAT
CGTTGCAGACATGCTGCAGATATGTCGAAGATGCTCATTGAAACTTGATGCTCATTGAAACTTTGATGATGCTCATTGAAACTTCGATGATGCTCAACGTGTACAAAACA
TTGTTTATTTAGAACTAGTTTCATCCTTGATCTTATTCTGCCGTCTAGTATAAGGCCATCTGCAGTTAGTAGATTTCTTCTGTATGGAAATTTTGTTTTATTTTAGTACA
ATTTTTTAATTTTTGAAGTATATGTTATGTCTCTGCAGATAATGCAGGAGTGATTGTGAACCCTAAAGGTGAAATGAAGGGTTCCGCAATTACTGGTCCTATTGGGAAGG
AGTGTGCAGATTTGTGGCCTAGGATTGCCAGTGCAGCCAATGCTATTGCTTAGTGTTACCCTAGAGTTTAAATCTTCTCCTTTCTGTGGTTACAGCAGCTCTTATCATTT
TTGATATCCCGGTGTTATAGTACTAATTTATTACCTCTTTGAGAGATTTGATGCAATACTTTTGAGACTAAGAAGAATTAGATCGAGTTGAAGGAATTATCTCATTATCA
TACCTCATGGATGTCTTTGATGGTTTATAACTTGCATACATCTCAAATTTTTTGGTCTTCGCATTCGTCTATTTAATTTTAATGTCGGGTCATACTAGTACTGACAATTT
CTTTTATTTTTAGTTTAACATTGTCAGGTTGCTTATTGTGCTAGATTGAAGTGGGTTAGATCCAGTTTAAATGTATAGAATGATTCTCGGCTTAGTTCTTCAAAC
Protein sequenceShow/hide protein sequence
MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEGIYIFLLVVDK
PPSYLFSIRSFMIQMFELDLSFIFSLKERCNSWFLSLNYYLTGSSV