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CsGy2G010545 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G010545
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionHelicase C-terminal domain-containing protein
Genome locationGy14Chr2:10388769..10389278
RNA-Seq ExpressionCsGy2G010545
SyntenyCsGy2G010545
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.16e-4681.13Show/hide
Query:  PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAP
        PSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSS P +I +W T DS    S +SSSSHHHH  HHHHHHKES+PEK PVFKKWQHPAAPFHYDSG+RAP
Subjt:  PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAP

Query:  R-FVPV
        R FVPV
Subjt:  R-FVPV

XP_004142258.1 uncharacterized protein At4g14450, chloroplastic [Cucumis sativus]1.09e-79100Show/hide
Query:  MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHP
        MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHP
Subjt:  MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHP

Query:  AAPFHYDSGARAPRFVPV
        AAPFHYDSGARAPRFVPV
Subjt:  AAPFHYDSGARAPRFVPV

XP_008460625.2 PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo]1.72e-5375.97Show/hide
Query:  MADSHPPTSPAAT-----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSS------HHHHLLHHHHHHKESDPE
        MADSH  TSP  T     PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSS PKDI +W TPDSR+ SS +SSSS      HHHH  H H HHKE + E
Subjt:  MADSHPPTSPAAT-----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSS------HHHHLLHHHHHHKESDPE

Query:  KAPVFKKWQHPAAPFHYDSGARAPRFVPV
        KAPVFKKWQHPAAPFHYDSG RAPRFVPV
Subjt:  KAPVFKKWQHPAAPFHYDSGARAPRFVPV

XP_023000559.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]4.00e-4573.98Show/hide
Query:  MADSHPPTSPAAT----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKK
        MA+S    S AA     PSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSS P +I +W T DS    S +SSSSHHHH   HHHHHKES+PEK PVFKK
Subjt:  MADSHPPTSPAAT----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKK

Query:  WQHPAAPFHYDSGARAPR-FVPV
        WQHPAAPFHYDSG+RAPR FVPV
Subjt:  WQHPAAPFHYDSGARAPR-FVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]7.81e-4973.98Show/hide
Query:  MADSHPPTSPAA-----TPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFK
        MADSH  TS A+      PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSS PKDI +W TPDSR+ SS++S           HHHHKES+PEK PVFK
Subjt:  MADSHPPTSPAA-----TPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFK

Query:  KWQHPAAPFHYDSGARAPRFVPV
        KWQHPAAPFHYDSG RAPRFVPV
Subjt:  KWQHPAAPFHYDSGARAPRFVPV

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ8 Uncharacterized protein5.27e-80100Show/hide
Query:  MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHP
        MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHP
Subjt:  MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHP

Query:  AAPFHYDSGARAPRFVPV
        AAPFHYDSGARAPRFVPV
Subjt:  AAPFHYDSGARAPRFVPV

A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like8.35e-5475.97Show/hide
Query:  MADSHPPTSPAAT-----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSS------HHHHLLHHHHHHKESDPE
        MADSH  TSP  T     PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSS PKDI +W TPDSR+ SS +SSSS      HHHH  H H HHKE + E
Subjt:  MADSHPPTSPAAT-----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSS------HHHHLLHHHHHHKESDPE

Query:  KAPVFKKWQHPAAPFHYDSGARAPRFVPV
        KAPVFKKWQHPAAPFHYDSG RAPRFVPV
Subjt:  KAPVFKKWQHPAAPFHYDSGARAPRFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like4.98e-4378.3Show/hide
Query:  PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAP
        PSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSS P +I +W T DS    S +SSSSHHHH     HHHKES+PEK PVFKKWQHPAAPFHYDSG+RAP
Subjt:  PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAP

Query:  R-FVPV
        R FVPV
Subjt:  R-FVPV

A0A6J1H320 uncharacterized protein At4g14450, chloroplastic-like1.62e-3256.59Show/hide
Query:  MADSHPPTSPAATPSR-----------LQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPE
        MADSH  TS  A  SR            + RAPASLQINR DWKVAIPLL+PLVSPSS PK+I +W+ P+S + SS +S+             HKES+PE
Subjt:  MADSHPPTSPAATPSR-----------LQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPE

Query:  KAPVFKKWQHPAAPFHYDSGARAPRFVPV
        K PVFKKWQHPAAPF YDSG   PRF+P 
Subjt:  KAPVFKKWQHPAAPFHYDSGARAPRFVPV

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like1.94e-4573.98Show/hide
Query:  MADSHPPTSPAAT----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKK
        MA+S    S AA     PSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSS P +I +W T DS    S +SSSSHHHH   HHHHHKES+PEK PVFKK
Subjt:  MADSHPPTSPAAT----PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKK

Query:  WQHPAAPFHYDSGARAPR-FVPV
        WQHPAAPFHYDSG+RAPR FVPV
Subjt:  WQHPAAPFHYDSGARAPR-FVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic1.7e-0735.2Show/hide
Query:  MADSHPPTSPAATP-----SRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPV
        MA +   TS +A       S+LQRRAP+ +    + S+W VAIPLLSPL    +S  D      P ++                       E + +K PV
Subjt:  MADSHPPTSPAATP-----SRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPV

Query:  FKKWQHPAAPFHYDSGARAPRFVPV
        FKKWQHPA+PF Y+     P F+ V
Subjt:  FKKWQHPAAPFHYDSGARAPRFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein3.7e-1042.55Show/hide
Query:  SRLQRRAPASLQIN--RSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHY
        SRLQRRAP  L+IN   ++WKVAIPLLSP  SP   P  +                        +         + EK PVFKKWQHPAAPF+Y
Subjt:  SRLQRRAPASLQIN--RSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHY

AT3G23170.1 unknown protein8.9e-1242.73Show/hide
Query:  PSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDS
        PSRL +R PA   +      ++W  AIPLLSPL +SP SSP D      P   +  ST  +                   EK PVFKKWQHPAAPF+Y+S
Subjt:  PSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDS

Query:  GARAPRFVPV
            P FVPV
Subjt:  GARAPRFVPV

AT4G14450.1 unknown protein1.2e-0835.2Show/hide
Query:  MADSHPPTSPAATP-----SRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPV
        MA +   TS +A       S+LQRRAP+ +    + S+W VAIPLLSPL    +S  D      P ++                       E + +K PV
Subjt:  MADSHPPTSPAATP-----SRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPV

Query:  FKKWQHPAAPFHYDSGARAPRFVPV
        FKKWQHPA+PF Y+     P F+ V
Subjt:  FKKWQHPAAPFHYDSGARAPRFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTCCCACCCACCAACCTCCCCCGCCGCTACCCCTAGCCGTCTTCAGCGCCGCGCTCCGGCATCCCTCCAAATCAATCGCTCCGATTGGAAGGTCGCCATCCC
TCTCTTGTCCCCCCTCGTCTCTCCTTCTTCCTCTCCCAAAGATATCCACAGTTGGAGTACCCCCGATTCAAGACAACCTTCCTCAACTACTTCTTCTTCTTCTCATCATC
ATCACCTTCTTCATCACCATCACCATCATAAAGAATCCGACCCGGAGAAGGCGCCGGTCTTCAAGAAATGGCAGCATCCGGCGGCTCCATTTCATTACGATTCCGGTGCT
AGGGCTCCCAGATTTGTACCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
CATGGCCGACTCCCACCCACCAACCTCCCCCGCCGCTACCCCTAGCCGTCTTCAGCGCCGCGCTCCGGCATCCCTCCAAATCAATCGCTCCGATTGGAAGGTCGCCATCC
CTCTCTTGTCCCCCCTCGTCTCTCCTTCTTCCTCTCCCAAAGATATCCACAGTTGGAGTACCCCCGATTCAAGACAACCTTCCTCAACTACTTCTTCTTCTTCTCATCAT
CATCACCTTCTTCATCACCATCACCATCATAAAGAATCCGACCCGGAGAAGGCGCCGGTCTTCAAGAAATGGCAGCATCCGGCGGCTCCATTTCATTACGATTCCGGTGC
TAGGGCTCCCAGATTTGTACCCGTTTAGATTTTTGTTTTATATTCAAAGAAAATAAAATCTCTTGAATTTGATCTGTAGATCTAACGCTCTCAGTTTGAGGAGCTTATTG
ACTGCAACTTATGCTTAACCACACTCGAATATTTGTACATTGCTTTTCTTGTTATTTATGAATTGCTCAC
Protein sequenceShow/hide protein sequence
MADSHPPTSPAATPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGA
RAPRFVPV