; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G011130 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G011130
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description50S ribosomal protein L24
Genome locationGy14Chr2:11007660..11014131
RNA-Seq ExpressionCsGy2G011130
SyntenyCsGy2G011130
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449336.1 PREDICTED: 50S ribosomal protein L24 [Cucumis melo]4.42e-11097.48Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_011649176.1 uncharacterized protein LOC101215964 [Cucumis sativus]1.32e-111100Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_022146016.1 uncharacterized protein LOC111015327 [Momordica charantia]1.60e-10391.19Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RG+ ASGS+IPRPEILKIR++PRPTVAGPKDTPMDVVLEKTYD KTGKGMP+L
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_022931187.1 uncharacterized protein LOC111437445 [Cucurbita moschata]5.57e-10491.82Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RG+ ASGS+IPRPEILKIR++PRPTVAGPKDTPMDVVLEK+YD KTGKGMP+L
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_038889029.1 50S ribosomal protein L24 [Benincasa hispida]1.94e-10493.08Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RG+ ASGS+IPR EILKIR++PRPTVAGPKDTPMDVVLEKTYD KTGKGMPEL
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

TrEMBL top hitse value%identityAlignment
A0A0A0LIP5 KOW domain-containing protein6.39e-112100Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

A0A1S3BL65 50S ribosomal protein L242.14e-11097.48Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

A0A6J1EXQ8 uncharacterized protein LOC1114374452.70e-10491.82Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RG+ ASGS+IPRPEILKIR++PRPTVAGPKDTPMDVVLEK+YD KTGKGMP+L
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

A0A6J1K0T3 uncharacterized protein LOC1114913632.70e-10491.82Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RG+ ASGS+IPRPEILKIR++PRPTVAGPKDTPMDVVLEK+YD KTGKGMP+L
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

B5AJV4 Ribosomal protein L242.14e-11097.48Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

SwissProt top hitse value%identityAlignment
A8F2D6 50S ribosomal protein L242.3e-2353.4Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRVA+    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG

Query:  SVI
         +I
Subjt:  SVI

C3PP96 50S ribosomal protein L242.3e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRVA+    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG

Query:  SVI
         +I
Subjt:  SVI

Q4UMR8 50S ribosomal protein L241.3e-2353.4Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRVA+    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG

Query:  SVI
         +I
Subjt:  SVI

Q92GX7 50S ribosomal protein L242.3e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRVA+    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG

Query:  SVI
         +I
Subjt:  SVI

Q9ZCR6 50S ribosomal protein L241.7e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG
        K+ +GD V+II GK KG+ G + +V   +N V+V G NLVKKH K  +  EGGI T E+P+H+SN+  IDP TG P KV +++LEDGSKVRVA+    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLEASG

Query:  SVI
         +I
Subjt:  SVI

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein1.8e-7683.65Show/hide
Query:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETG IKRVIR+QNRVIVEGKNL+KKHIK G  HEGGIFTVEAPLH SNVQV+DPVTG+PCKVG +YLEDG
Subjt:  MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        +KVRVARG   SGS+IPRPEILKIR++PRPT AGPKDTPM+ V E+TYD KTGKGMP+L
Subjt:  SKVRVARGLEASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

AT5G54600.1 Translation protein SH3-like family protein1.4e-1237.5Show/hide
Query:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR
        GD V +I G+DKG+ G + ++    + ++++  NL  KH+K + +G  G I  +EAP+H SNV +         +VG++ LEDG KVR
Subjt:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR

AT5G54600.2 Translation protein SH3-like family protein6.8e-0734.48Show/hide
Query:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR
        GD V +I G+DKG+ G + ++  T N  I                  G I  +EAP+H SNV +         +VG++ LEDG KVR
Subjt:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGAAGGCTGCTCAAAAGCTTATCAGGCACTGGAAAATTCTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCG
TGTTATTCGCACTCAAAATCGTGTTATTGTTGAGGGAAAAAATCTGGTTAAAAAACACATAAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACAGTTGAAGCTCCCC
TACATGTATCAAATGTCCAAGTTATTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTTATAGATATCTTGAAGATGGTTCTAAGGTACGAGTTGCAAGAGGATTGGAA
GCCTCTGGATCTGTAATTCCTCGCCCGGAGATCTTAAAGATAAGGAGTAGTCCAAGACCTACAGTTGCTGGCCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATCCTAAAACAGGGAAGGGCATGCCTGAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGAAGGCTGCTCAAAAGCTTATCAGGCACTGGAAAATTCTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCG
TGTTATTCGCACTCAAAATCGTGTTATTGTTGAGGGAAAAAATCTGGTTAAAAAACACATAAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACAGTTGAAGCTCCCC
TACATGTATCAAATGTCCAAGTTATTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTTATAGATATCTTGAAGATGGTTCTAAGGTACGAGTTGCAAGAGGATTGGAA
GCCTCTGGATCTGTAATTCCTCGCCCGGAGATCTTAAAGATAAGGAGTAGTCCAAGACCTACAGTTGCTGGCCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATCCTAAAACAGGGAAGGGCATGCCTGAACTTTAA
Protein sequenceShow/hide protein sequence
MGWKAAQKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVARGLE
ASGSVIPRPEILKIRSSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL