CuGenDBv2

Gene ID	CsGy2G012480
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein CASPARIAN STRIP INTEGRITY FACTOR 1
Genome location	Gy14Chr2:12383694..12385585
RNA-Seq Expression	CsGy2G012480
Synteny	CsGy2G012480
Gene Ontology terms	GO:0010039 - response to iron ion (biological process) GO:0010447 - response to acidic pH (biological process) GO:0055072 - iron ion homeostasis (biological process) GO:2000067 - regulation of root morphogenesis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0048226 - Casparian strip (cellular component)
InterPro domains	IPR038974 - Protein Casparian strip integrity factor 1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460971.1 PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo]

4.91e-52

93.41

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_011649242.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus]

4.38e-57

100

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_022146128.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia]

1.02e-39

77.78

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+DG+RK  GEME+I HERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_022986650.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima]

1.08e-38

80.22

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Query:  MFLKYKLSFIFI-LLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MF KYKL F+F  LLLSTSF STICIAGRPSKLV EVV   GVVHE  KR TR EME++ HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Subjt:  MFLKYKLSFIFI-LLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_038902215.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida]

6.56e-52

94.44

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVA GGVVHED KRKTRGEME+I HERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ22 Uncharacterized protein

2.12e-57

100

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A1S3CEV9 uncharacterized protein LOC103499698

2.38e-52

93.41

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A5A7TUS0 Uncharacterized protein

2.38e-52

93.41

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A6J1CXR3 protein CASPARIAN STRIP INTEGRITY FACTOR 1

4.92e-40

77.78

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+DG+RK  GEME+I HERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A6J1JEM0 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like

5.25e-39

80.22

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Query:  MFLKYKLSFIFI-LLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MF KYKL F+F  LLLSTSF STICIAGRPSKLV EVV   GVVHE  KR TR EME++ HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Subjt:  MFLKYKLSFIFI-LLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

SwissProt top hits

e value

%identity

Alignment

O65684 Protein CASPARIAN STRIP INTEGRITY FACTOR 2

2.4e-09

43.48

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FI  LL+S S  + +C AGR S L+       PEVV +   +HE              HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Q84MD2 Protein CASPARIAN STRIP INTEGRITY FACTOR 1

4.0e-09

47.06

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FIF +++S S LS +  AGRPS  V + +           R+   E     HERLLR+NTKDYG   PSP   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Arabidopsis top hits

e value

%identity

Alignment

AT2G16385.1 unknown protein

2.9e-10

47.06

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FIF +++S S LS +  AGRPS  V + +           R+   E     HERLLR+NTKDYG   PSP   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

AT4G34600.1 unknown protein

1.7e-10

43.48

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FI  LL+S S  + +C AGR S L+       PEVV +   +HE              HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Sequences

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CDS sequence

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ATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTTTTATCCACCATCTGCATTGCAGGTCGACCATCAAAGTTGGTTCCTGAGGTTGT
TGCTAAGGGTGGAGTTGTGCATGAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAGAT
ATGATCCATCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAA

mRNA sequence

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GCTTATCTCTATAAGACCCCATCACTTTTGTCCAATAATCCAATGTCCCTTAAATCATACATAAGGAAGCTTCATTTGGGTCTATGCTCTTAGGAAGAAGAAGAAGAAAG
AAGAAGAAGAAAGAAAAGAAAAGAAAAGAAAGACCCAACTTCAAAAAAACATATAAAAGTGGTCATATCATTTATAAGGTTGTTTCTACTTTCTATCATATTTTTGAGAA
TCATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTTTTATCCACCATCTGCATTGCAGGTCGACCATCAAAGTTGGTTCCTGAGGTT
GTTGCTAAGGGTGGAGTTGTGCATGAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAG
ATATGATCCATCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAATAAGGGCACAAAAACAAATATCATCACCAACGTGGGTAGTAACCTTATAAACATA
TATAAATAATATGAAAAAGTAATATCATGTGTTTCATATAGTGTAAGTATAATATATATGTATTAATCATATATATAATATATAGTGTATAATATATATGGTCATAGACT
CACATATATATGAATATAAAGCCTTTGTGATGTTTTGCTTCAGTTACTAAGTACTATATATATATTGTTATATATTGTGTATTTTGGAATATAGGTTGCTTTATATGATT
AATTATGCTC

Protein sequence

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MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

CsGy2G012480 (gene) of Cucumber (Gy14) v2.1 genome