CuGenDBv2

Gene ID	CsGy2G012735
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Glycosyl hydrolase family protein
Genome location	Gy14Chr2:12583293..12583774
RNA-Seq Expression	CsGy2G012735
Synteny	CsGy2G012735
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domains	IPR001764 - Glycoside hydrolase, family 3, N-terminal IPR017853 - Glycoside hydrolase superfamily IPR036962 - Glycoside hydrolase, family 3, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0045630.1 lysosomal beta glucosidase-like [Cucumis melo var. makuwa]

2.11e-24

45.39

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Query:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT
        MKVMVVLLCCWAALVAV+ED                                                              +ATAQEWI MVNSFQQAT
Subjt:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT

Query:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG
        LSSRLGIPIMYGIDAVHGHNGVYNAT+F +N+G        +GA   K +RG
Subjt:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG

KAE8651881.1 hypothetical protein Csa_006705 [Cucumis sativus]

1.74e-68

100

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Query:  MKVMVVLLCCWAALVAVEEDCQATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATRRKYMRGGSKLCFHKLPMPFGDIG
        MKVMVVLLCCWAALVAVEEDCQATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATRRKYMRGGSKLCFHKLPMPFGDIG
Subjt:  MKVMVVLLCCWAALVAVEEDCQATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATRRKYMRGGSKLCFHKLPMPFGDIG

Query:  G
        G
Subjt:  G

TYK02625.1 lysosomal beta glucosidase-like [Cucumis melo var. makuwa]

2.42e-24

45.39

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Query:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT
        MKVMVVLLCCWAALVAV+ED                                                              +ATAQEWI MVNSFQQAT
Subjt:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT

Query:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG
        LSSRLGIPIMYGIDAVHGHNGVYNAT+F +N+G        +GA   K +RG
Subjt:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG

XP_016902614.1 PREDICTED: LOW QUALITY PROTEIN: lysosomal beta glucosidase-like [Cucumis melo]

2.62e-23

48.12

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Query:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT
        MKVMVVLLCCWAALVAV+ED                                                              +ATAQEWI MVNSFQQAT
Subjt:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT

Query:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG
        LSSRLGIPIMYGIDAVHGHNGVYNAT+F +N+G
Subjt:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG

XP_022146225.1 uncharacterized protein LOC111015489 [Momordica charantia]

1.99e-23

87.5

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Query:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        QATAQEWIDMVNSFQQ +LSSRLGIP++YGIDAVHGHN VYNATIF +NVGLGATR
Subjt:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E304 LOW QUALITY PROTEIN: lysosomal beta glucosidase-like

1.27e-23

48.12

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Query:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT
        MKVMVVLLCCWAALVAV+ED                                                              +ATAQEWI MVNSFQQAT
Subjt:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT

Query:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG
        LSSRLGIPIMYGIDAVHGHNGVYNAT+F +N+G
Subjt:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG

A0A5A7TR74 Lysosomal beta glucosidase-like

1.02e-24

45.39

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Query:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT
        MKVMVVLLCCWAALVAV+ED                                                              +ATAQEWI MVNSFQQAT
Subjt:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT

Query:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG
        LSSRLGIPIMYGIDAVHGHNGVYNAT+F +N+G        +GA   K +RG
Subjt:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG

A0A5D3BU50 Lysosomal beta glucosidase-like

1.17e-24

45.39

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Query:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT
        MKVMVVLLCCWAALVAV+ED                                                              +ATAQEWI MVNSFQQAT
Subjt:  MKVMVVLLCCWAALVAVEED-------------------------------------------------------------CQATAQEWIDMVNSFQQAT

Query:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG
        LSSRLGIPIMYGIDAVHGHNGVYNAT+F +N+G        +GA   K +RG
Subjt:  LSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVG--------LGATRRKYMRG

A0A6J1CWQ0 uncharacterized protein LOC111015489

9.64e-24

87.5

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Query:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        QATAQEWIDMVNSFQQ +LSSRLGIP++YGIDAVHGHN VYNATIF +NVGLGATR
Subjt:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

A0A6J1FXT0 uncharacterized protein LOC111448193

3.00e-22

85.71

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Query:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        QATAQ WIDMVNSFQQ +LSSRLGIPIMYGIDAVHGH  VYNAT+F +NVGLGATR
Subjt:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

SwissProt top hits

e value

%identity

Alignment

A7LXU3 Beta-glucosidase BoGH3B

3.3e-04

30.16

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Query:  QEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGAT-RRKYMRGGSKL
        ++W + +   Q+ ++   +GIP +YG+D +HG     + T+F   + +GAT  R+  R G+K+
Subjt:  QEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGAT-RRKYMRGGSKL

Q23892 Lysosomal beta glucosidase

2.7e-06

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Query:  WIDMVNSFQQATL-SSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGAT
        W+DM+N+ Q   +  S   IP++YG+D+VHG N V+ AT+F +N GL AT
Subjt:  WIDMVNSFQQATL-SSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGAT

Arabidopsis top hits

e value

%identity

Alignment

AT3G47050.1 Glycosyl hydrolase family protein

3.9e-16

65.45

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Query:  ATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        A +  W DM++ FQ++ L SRLGIPI+YGIDAVHG+N VY ATIF +N+GLGATR
Subjt:  ATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

AT5G04885.1 Glycosyl hydrolase family protein

2.9e-19

71.43

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Query:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        +A+AQ W+DM+N +Q+  L SRLGIP++YGIDAVHGHN VYNATIF +NVGLGATR
Subjt:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

AT5G20940.1 Glycosyl hydrolase family protein

1.3e-16

71.15

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Query:  QEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        + W++MVN  Q+  LS+RLGIPI+YGIDAVHGHN VYNATIF +NVGLG TR
Subjt:  QEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

AT5G20950.1 Glycosyl hydrolase family protein

1.6e-17

67.86

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Query:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        +AT + W++MVN  Q+A+LS+RLGIP++YGIDAVHGHN VY ATIF +NVGLG TR
Subjt:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

AT5G20950.2 Glycosyl hydrolase family protein

1.6e-17

67.86

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Query:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR
        +AT + W++MVN  Q+A+LS+RLGIP++YGIDAVHGHN VY ATIF +NVGLG TR
Subjt:  QATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATR

Sequences

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CDS sequence

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ATGAAGGTGATGGTGGTTTTACTCTGTTGCTGGGCAGCTTTGGTGGCTGTTGAGGAAGACTGTCAAGCTACTGCACAGGAGTGGATTGACATGGTGAATTCCTTCCAGCA
GGCCACATTATCAAGTAGGCTTGGAATTCCAATAATGTATGGTATTGATGCCGTCCATGGTCACAATGGCGTCTACAATGCTACCATCTTCCTCAACAATGTCGGTCTTG
GTGCAACCAGGCGAAAATATATGAGAGGAGGATCTAAACTTTGTTTTCACAAACTCCCAATGCCATTTGGAGATATTGGTGGTTAA

mRNA sequence

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Protein sequence

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MKVMVVLLCCWAALVAVEEDCQATAQEWIDMVNSFQQATLSSRLGIPIMYGIDAVHGHNGVYNATIFLNNVGLGATRRKYMRGGSKLCFHKLPMPFGDIGG

CsGy2G012735 (gene) of Cucumber (Gy14) v2.1 genome