; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G013370 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G013370
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationGy14Chr2:13119383..13120285
RNA-Seq ExpressionCsGy2G013370
SyntenyCsGy2G013370
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045720.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]5.03e-12786.73Show/hide
Query:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL
        KLIQLGITAS+DLGQIGGSWEFNFSDFDF+ DAHSP AIPFLE NGLDFK +KKDGIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLIT+L
Subjt:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL

Query:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKM
        P+SMEEFA +VVNEVGIVRDLKHMA+FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RF M S+VCNGFLYGFS++LESMKMKM
Subjt:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKM

Query:  KMKICHHNILR
        K+KI  HNILR
Subjt:  KMKICHHNILR

KAA0045730.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.09e-17084.62Show/hide
Query:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS
        MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFS
Subjt:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS

Query:  DFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA
        DFDF+ D+HSP AIPFLE NGLDFK +KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFAT+VVNEVGIVRDLKHMA
Subjt:  DFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA

Query:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RFGM  +VCNGFLYGFSE+LES    MKM I HHNILR
Subjt:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.53e-11060.31Show/hide
Query:  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPY
        + PLIR+VWA N D EI R D CL  +++++IDTEFPG I ++P G+ID+ELY DF FNVNQTK+IQLG+T SD++G IGG+WEFNFSDFD E DAH+P 
Subjt:  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPY

Query:  AIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRL
        +I FL+ NGLDF  +KKDGI +  F  +FL  +RK  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG VRDLKHMA+FCEGL+  G L
Subjt:  AIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRL

Query:  GLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLE
        GLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  N+++C+GFLYG S+  E
Subjt:  GLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLE

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]4.23e-22199.33Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FDFEADAHSPYAIPFLEHNGLD K MKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
Subjt:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
        FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]6.91e-13765.13Show/hide
Query:  GRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFD
        G N+ R    K LI +VWASNFD+EI++ +ECL FHTI++IDTEFPGFI  SP GSID+ LY+DF FNVNQTKLIQLG+TA DD G+IGGSWEFNFSDFD
Subjt:  GRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFD

Query:  FEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFC
         E DA SP +  FLE NGLDF  +KK GIPI  FT KF+ I+RK ++FRWVTFHGLYDIGYLIKAMG+  VLP++MEEFATVVV  +GIVRDLKHMA+FC
Subjt:  FEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFC

Query:  EGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFS---------LYIPCY
        EGL+D G+LGLERLGKLL+ KR+G+KHNAGSDSLLTASAH EM++RF M++++C+G+LYGFS  L+SM + M M   H  I+ F           Y+P Y
Subjt:  EGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFS---------LYIPCY

Query:  FVFY
          +Y
Subjt:  FVFY

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease2.05e-22199.33Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FDFEADAHSPYAIPFLEHNGLD K MKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
Subjt:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
        FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST

A0A5A7TRF3 Putative CCR4-associated factor 1-like protein 82.43e-12786.73Show/hide
Query:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL
        KLIQLGITAS+DLGQIGGSWEFNFSDFDF+ DAHSP AIPFLE NGLDFK +KKDGIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLIT+L
Subjt:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL

Query:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKM
        P+SMEEFA +VVNEVGIVRDLKHMA+FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RF M S+VCNGFLYGFS++LESMKMKM
Subjt:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKM

Query:  KMKICHHNILR
        K+KI  HNILR
Subjt:  KMKICHHNILR

A0A5A7TRG1 Poly(A)-specific ribonuclease5.27e-17184.62Show/hide
Query:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS
        MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFS
Subjt:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS

Query:  DFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA
        DFDF+ D+HSP AIPFLE NGLDFK +KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFAT+VVNEVGIVRDLKHMA
Subjt:  DFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA

Query:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RFGM  +VCNGFLYGFSE+LES    MKM I HHNILR
Subjt:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR

A0A6J1CXP9 Poly(A)-specific ribonuclease3.98e-10955.33Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MG   +  S R    IR+VW+ NFD E+A  ++CL  + ILTIDTEFPGFI  +P G+I+++LY DF FNVN+TKLIQLG+TASD++G IG +WEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FD + D H+  ++ FL+ NGLDF  +K+ GIPI  FT K   + RK  I RWVTFHGLYDIGYL+KAMG+   +P+SMEEFA +V   +G V DLKHMA+
Subjt:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNI---LRFSLYIPCYFVFY
        FCEGL+D G+LGLE+L +L+N KRFG KH+AGSDSLLTAS + +M  +F + S+VC+GFLYG    L + K+K+   +    I   LR + Y PCY  +Y
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNI---LRFSLYIPCYFVFY

A0A6J1G7L2 Poly(A)-specific ribonuclease1.46e-10959.63Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MG RN+ R  R  P I++VWASNFD EI R + CL+ + IL+IDTEFPG I  +P GSID+ +Y+D  FNVNQTKLIQLG+TASD+ GQ+ GSWEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FD + D  +P +I FLE NGLDF  +KK GIP++ FT  F  I+R+  + +WVTFHGLYDIGYL+KAMG+   LP+SMEEFA +V   VG+VRDLK +A+
Subjt:  FDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESM
        +CEGL+  GR+GLERLG+LL  KRFGMKH+AGSDSLLTA  H +M   F + S+  +G LYG    L+ M
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESM

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.0e-3738.96Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LIQLG+T       I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDFKTMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
        +NGLD   ++++GI I  F  +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+K MA  C GL    R GL+R
Subjt:  HNGLDFKTMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMV
        +  +L ++R G  H+AGSDS LTA    +++
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMV

Q9C6M9 Putative CCR4-associated factor 1 homolog 44.0e-3737.76Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+   + ++GI I  F + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    R GL+R
Subjt:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVC
        +  +L +KR G  H+AGSDS LTA    ++      + K C
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVC

Q9LXM4 Putative CCR4-associated factor 1 homolog 89.1e-4243.38Show/hide
Query:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGI
        ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IGG+WE NFSDF  + DA +  +I FL  NGLD + ++++GI
Subjt:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGI

Query:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN
         I  F  +   +L+K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    RLGLE L     L R G  H+
Subjt:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN

Query:  AGSDSLLTASAHLEMVERF
        AGS++ LTA    +++  F
Subjt:  AGSDSLLTASAHLEMVERF

Q9SFX6 Putative CCR4-associated factor 1 homolog 32.0e-3639.29Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G    +WE N SDFD      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+   ++++GI I  F + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    + GL+R
Subjt:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTA
        +  +L +KR G  H+AGSDS LTA
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTA

Q9SHJ0 Probable CCR4-associated factor 1 homolog 17.2e-4739.84Show/hide
Query:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA
        +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV  TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +
Subjt:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA

Query:  IPFLEHNGLDFKTMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR
        I FL  +GLD + ++ +G+ +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G V D K MA FCEGL +H  
Subjt:  IPFLEHNGLDFKTMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR

Query:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSET
        LGL +L +LL + R G  H+AGSDSL+TA   +++   +  +S+   G +YG  ++
Subjt:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSET

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-4839.84Show/hide
Query:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA
        +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV  TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +
Subjt:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA

Query:  IPFLEHNGLDFKTMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR
        I FL  +GLD + ++ +G+ +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G V D K MA FCEGL +H  
Subjt:  IPFLEHNGLDFKTMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR

Query:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSET
        LGL +L +LL + R G  H+AGSDSL+TA   +++   +  +S+   G +YG  ++
Subjt:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSET

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-3739.29Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G    +WE N SDFD      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+   ++++GI I  F + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    + GL+R
Subjt:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTA
        +  +L +KR G  H+AGSDS LTA
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTA

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-3837.76Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+   + ++GI I  F + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    R GL+R
Subjt:  HNGLDFKTMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVC
        +  +L +KR G  H+AGSDS LTA    ++      + K C
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVC

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-3838.96Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LIQLG+T       I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDFKTMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
        +NGLD   ++++GI I  F  +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+K MA  C GL    R GL+R
Subjt:  HNGLDFKTMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMV
        +  +L ++R G  H+AGSDS LTA    +++
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTASAHLEMV

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.5e-4343.38Show/hide
Query:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGI
        ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IGG+WE NFSDF  + DA +  +I FL  NGLD + ++++GI
Subjt:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGI

Query:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN
         I  F  +   +L+K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    RLGLE L     L R G  H+
Subjt:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN

Query:  AGSDSLLTASAHLEMVERF
        AGS++ LTA    +++  F
Subjt:  AGSDSLLTASAHLEMVERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATT
CCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAA
CTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCA
TATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACG
TGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGG
TGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTG
AATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAA
TGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATT
TTGTTTTTTATATGTCCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATT
CCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAA
CTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCA
TATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACG
TGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGG
TGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTG
AATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAA
TGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATT
TTGTTTTTTATATGTCCACTTAA
Protein sequenceShow/hide protein sequence
MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSP
YAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLL
NLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST