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CsGy2G014470 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G014470
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionC2H2-type domain-containing protein
Genome locationGy14Chr2:14661374..14661864
RNA-Seq ExpressionCsGy2G014470
SyntenyCsGy2G014470
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]6.66e-72100Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR

Query:  KGVPRRA
        KGVPRRA
Subjt:  KGVPRRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]6.97e-3358.04Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHGILGENKSFRK
        MDDKS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCKN N  E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPF
        ++RKG+P RAPF
Subjt:  KSRKGVPRRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]2.83e-3257.14Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCKN N  E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPF
        ++RKG+P RAPF
Subjt:  KSRKGVPRRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]3.46e-3357.52Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+EREA E E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPFF
        ++RKG+P RAPFF
Subjt:  KSRKGVPRRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]1.21e-3358.41Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHGILGENKSFRK
        MDDKS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCKN N  E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPFF
        ++RKG+P RAPFF
Subjt:  KSRKGVPRRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein4.48e-75100Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR

Query:  KGVPRRAPFF
        KGVPRRAPFF
Subjt:  KGVPRRAPFF

A0A6J1D739 uncharacterized protein LOC1110179593.40e-2754.24Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTH-KHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGI---LGEN----
        MDDKSLPYNLRLRK   +S+PTE SK + KH+RDFQEK  ++      + ++ RCEKCGC F IE SL SHHCK KN+     +E   +   L +N    
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTH-KHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGI---LGEN----

Query:  KSFRKKSRKGVPRRAPFF
        KSFRK+SRKG+P RAP F
Subjt:  KSFRKKSRKGVPRRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349501.67e-3357.52Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+EREA E E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPFF
        ++RKG+P RAPFF
Subjt:  KSRKGVPRRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGAAAA
GGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAA
ATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGCACCTTTCTTT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGAAAA
GGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAA
ATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGCACCTTTCTTT
TAG
Protein sequenceShow/hide protein sequence
MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSRKGVPRRAPFF