CuGenDBv2

Gene ID	CsGy2G014610
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome location	Gy14Chr2:14690696..14692525
RNA-Seq Expression	CsGy2G014610
Synteny	CsGy2G014610
Gene Ontology terms	GO:0016874 - ligase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]

1.46e-90

81.46

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKKGE VED+AE PR++D++SKLG LPSN+VQLL +REKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPA K K KRKK+KSSGI+TVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.59e-91

82.02

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKKGE VED+AE PR++D++SKLG LPSN+VQLL +REKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPA K K KRKK+KSSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

XP_004148046.1 uncharacterized protein LOC101208336 [Cucumis sativus]

3.49e-114

100

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

XP_008457855.1 PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo]

3.88e-109

96.09

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVDREKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

XP_038901892.1 uncharacterized protein LOC120088571 [Benincasa hispida]

3.65e-98

88.27

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRND-DKISKLGTLPSNIVQLLVDREKQVF
        MSDRE+TDSDAPEEFTAEQGVQQDEEIRKVQKESKARV+REGKERRRLWAEKKTPRPSKKGE VEDLAEPPR+  D+ISKLG LPSNIVQLLVDREKQVF
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRND-DKISKLGTLPSNIVQLLVDREKQVF

Query:  SSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SSD  DEKPAIKPK KRKKTKSSGIETVLL+ERTPS CL NSLEFLKKRKMN+ RSS+VL NPNQA RLLS+SGLL KK
Subjt:  SSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM07 Uncharacterized protein

1.69e-114

100

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

A0A1S3C749 uncharacterized protein LOC103497440

1.88e-109

96.09

Show/hide

Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVDREKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

A0A5A7TWK6 Uncharacterized protein

1.88e-109

96.09

Show/hide

Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVDREKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

A0A6J1DXW1 uncharacterized protein LOC111025162

2.88e-90

81.36

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSD E+TDSDAPEEFTAEQG+QQD+EI KVQ ESKARV+REGKERRRLWAEKKTPRPSKKGE VED+AE P + D+ SKLG LPSN+VQLL DREKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTK
        SD GDEKPA KPK KRKKTKSSGIETV+LN+R P+ CLQNS+EFLKKRKMN+ RSS+VL NPNQA R LSSSGLLTK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTK

A0A6J1G7P4 uncharacterized protein LOC111451498

2.03e-90

81.46

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS
        MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK E VED+AE PR++D++SKLG LPSN+VQLL +REKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPA K K KRKK+KSSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G37090.1 unknown protein

3.7e-30

45.9

Show/hide

Query:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDRE
        MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S+K EI+ED+    EP  N + ++  G L  +I+  L +RE
Subjt:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDRE

Query:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        KQ   SDS +E+  I    ++KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L  K+
Subjt:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

AT4G37090.2 unknown protein

9.2e-29

45.9

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Query:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDRE
        MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S+K EI+ED+    EP  N + ++  G L  +I+  L +RE
Subjt:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDRE

Query:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        KQ   SDS +E+  I    ++KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L  K+
Subjt:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

Sequences

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CDS sequence

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ATGTCGGACAGAGAGGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAACAAGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAG
GGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCTCCTAGAAATG
ACGACAAAATTAGCAAATTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCATCAGATTCGGGCGATGAAAAGCCAGCAATT
AAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAA
AAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAGCAATCCTAATCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTACTAACGAAGAAATAG

mRNA sequence

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Protein sequence

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MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAI
KPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

CsGy2G014610 (gene) of Cucumber (Gy14) v2.1 genome