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CsGy2G016093 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G016093
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTrafficking protein particle complex subunit 2
Genome locationGy14Chr2:16068664..16072628
RNA-Seq ExpressionCsGy2G016093
SyntenyCsGy2G016093
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EYU24657.1 hypothetical protein MIMGU_mgv1a0160741mg, partial [Erythranthe guttata]1.46e-3194.55Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSR+TSSHFDTKVRALARKY+
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
KAE9608652.1 putative trafficking protein particle complex subunit 2 [Lupinus albus]6.72e-3296.36Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
KGN62237.1 hypothetical protein Csa_016953 [Cucumis sativus]2.34e-32100Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
QHN97238.1 Transport protein particle 20 kDa subunit [Arachis hypogaea]1.93e-3194.55Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHD+RNDDGIKSFFQEVHELYIKT+LNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
XP_004147330.1 transport protein particle 20 kDa subunit [Cucumis sativus]2.27e-31100Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
TrEMBL top hitse value%identityAlignment
A0A022Q7I5 Uncharacterized protein (Fragment)7.08e-3294.55Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSR+TSSHFDTKVRALARKY+
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
A0A068UJQ5 Uncharacterized protein3.25e-3296.36Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
A0A0A0LN59 Uncharacterized protein1.13e-32100Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
A0A251U114 Putative trafficking protein particle complex subunit 26.57e-3296.36Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSRVTSSHFDTKVRALAR+YL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
A0A6A4Q4M8 Putative trafficking protein particle complex subunit 23.25e-3296.36Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
SwissProt top hitse value%identityAlignment
A7RVK7 Probable trafficking protein particle complex subunit 22.6e-1149.09Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        M+LHD +NDDGIK+FF +V+E +IK ++NP Y   S++ S++FD KV   A+K++
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
E2QV03 Trafficking protein particle complex subunit 22.6e-1152.73Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ++LHD R +DGIK+FF +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Q3T0F2 Trafficking protein particle complex subunit 22.6e-1152.73Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ++LHD R +DGIK+FF +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Q9CQP2 Trafficking protein particle complex subunit 22.6e-1152.73Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ++LHD R +DGIK+FF +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Q9USZ5 Transport protein particle 20 kDa subunit6.3e-1356.36Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLH +++ D IK FFQE+HELYIKT+++P Y P   + S  FD KVR++AR+YL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Arabidopsis top hitse value%identityAlignment
AT1G80500.1 SNARE-like superfamily protein1.5e-2592.73Show/hide
Query:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        MLLHDSRN+DGIKSFFQEVHELYIK +LNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTTCACGACTCTCGCAATGATGATGGAATTAAGAGCTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACCATACTCAATCCCCTCTACTTGCCTGGATCACG
TGTCACGTCTTCACATTTTGACACAAAAGTTCGTGCACTCGCAAGGAAGTATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTACTTCACGACTCTCGCAATGATGATGGAATTAAGAGCTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACCATACTCAATCCCCTCTACTTGCCTGGATCACG
TGTCACGTCTTCACATTTTGACACAAAAGTTCGTGCACTCGCAAGGAAGTATCTCTAG
Protein sequenceShow/hide protein sequence
MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL