CuGenDBv2

Gene ID	CsGy2G016413
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	PMD domain-containing protein
Genome location	Gy14Chr2:19329001..19329498
RNA-Seq Expression	CsGy2G016413
Synteny	CsGy2G016413
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]

2.77e-76

77.58

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATS S+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL E K FVKTLR+DENRIL ET T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLSG+I KN++ELK KQ EISKTCEEIDKL+CA I+GD DAKMLS LRESLE+TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

KAA0060137.1 uncharacterized protein E6C27_scaffold39G00580 [Cucumis melo var. makuwa]

4.96e-78

76.97

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIA SGS+NL  L+ELV+GYFQGVENHNQ+  S LLQSTKD QL EAK FVKTLR+DEN IL ET T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLS II KN++ELK KQHEISKTCEEIDK ECAPI+ D+DAKMLS LRESL++TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

TYK21862.1 uncharacterized protein E5676_scaffold836G00150 [Cucumis melo var. makuwa]

3.00e-79

80.62

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATSGS+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL EAK FVKTLRVDENRIL ET T +R L RLSAKEAKLEAKLK VR E  
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKN
        KLSGII KN++ELK KQHEISKTCEEIDKLECAPI+GD+DAKMLS LRESLE+TLEELKN
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKN

XP_016903650.1 PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo]

1.63e-83

80.61

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATSGS+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL EAK FVKTLRVDENRIL ET T +R L RLSAKEAKLEAKLK VR E  
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLSGII KN++ELK KQHEISKTCEEIDKLECAPI+GD+DAKMLS LRESLE+TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]

1.59e-95

98.18

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAK FVKTLRVDENRILAET TAKRRLTRLSAKEAKLEAKLKMVRAESA
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLSGIIFKNDLELK KQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E6N4 uncharacterized protein LOC103504169

7.90e-84

80.61

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATSGS+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL EAK FVKTLRVDENRIL ET T +R L RLSAKEAKLEAKLK VR E  
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLSGII KN++ELK KQHEISKTCEEIDKLECAPI+GD+DAKMLS LRESLE+TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

A0A5A7SJ85 Uncharacterized protein

1.34e-76

77.58

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATS S+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL E K FVKTLR+DENRIL ET T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLSG+I KN++ELK KQ EISKTCEEIDKL+CA I+GD DAKMLS LRESLE+TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

A0A5A7SWI5 Uncharacterized protein

7.90e-84

80.61

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATSGS+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL EAK FVKTLRVDENRIL ET T +R L RLSAKEAKLEAKLK VR E  
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLSGII KN++ELK KQHEISKTCEEIDKLECAPI+GD+DAKMLS LRESLE+TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

A0A5A7UZR8 Uncharacterized protein

2.40e-78

76.97

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIA SGS+NL  L+ELV+GYFQGVENHNQ+  S LLQSTKD QL EAK FVKTLR+DEN IL ET T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KLS II KN++ELK KQHEISKTCEEIDK ECAPI+ D+DAKMLS LRESL++TLEELKN KWTP
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

A0A5D3DE43 Uncharacterized protein

1.45e-79

80.62

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Query:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA
        M KIF AIATSGS+NL  L+ELV+GYFQGVENHNQ+ SS LLQSTKD QL EAK FVKTLRVDENRIL ET T +R L RLSAKEAKLEAKLK VR E  
Subjt:  MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESA

Query:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKN
        KLSGII KN++ELK KQHEISKTCEEIDKLECAPI+GD+DAKMLS LRESLE+TLEELKN
Subjt:  KLSGIIFKNDLELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCATAAGATCTTTGATGCGATTGCGACTAGCGGCAGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAGAACCATAATCAAATACA
TTCCTCATTTCTACTCCAATCAACTAAGGATGTTCAACTAACGGAGGCAAAAGATTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTGGCAGAGACCATCACTG
CTAAACGTCGTCTTACACGACTGTCCGCCAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGAGCTGAGTCTGCTAAACTTTCTGGAATAATTTTTAAGAACGAC
CTGGAGCTGAAGCTGAAGCAACATGAGATTTCGAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTTGGAGATATTGATGCTAAAATGTTATCAACACT
TCGTGAATCTTTAGAAAGCACACTAGAGGAGCTGAAGAACTTTAAATGGACTCCATGA

mRNA sequence

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Protein sequence

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MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKDFVKTLRVDENRILAETITAKRRLTRLSAKEAKLEAKLKMVRAESAKLSGIIFKND
LELKLKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

CsGy2G016413 (gene) of Cucumber (Gy14) v2.1 genome