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CsGy2G016490 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G016490
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationGy14Chr2:20820827..20821136
RNA-Seq ExpressionCsGy2G016490
SyntenyCsGy2G016490
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAC51379.1 NADH dehydrogenase ND1 subunit, partial [Nicotiana tomentosiformis]1.30e-5096.3Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY+ASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

KAE8652931.1 hypothetical protein Csa_017770 [Cucumis sativus]2.54e-57100Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLLGSQLNF
        SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLLGSQLNF
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLLGSQLNF

KAF1876862.1 hypothetical protein Lal_00033154 [Lupinus albus]1.28e-5091.86Show/hide
Query:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        M TVI STVDIV+AQSKYGFWGWNLWRQPIG ++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSL
Subjt:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

THU42127.1 hypothetical protein C4D60_Mb00t13160 [Musa balbisiana]1.57e-5191.86Show/hide
Query:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        M TVISSTVDIVEAQSKYGFWGWNLWRQPIGF++F+ISSLAECERLPFDLPEAEEELVAGYQTEYSGI+FGLFY+ASYLNLL SSL
Subjt:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

THU42787.1 hypothetical protein C4D60_Mb00t17950 [Musa balbisiana]2.41e-5191.86Show/hide
Query:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        M TVISSTVDIVEAQSKYGFWGWNLWRQPIGF++F+ISSLAECERLPFDLPEAEEELVAGYQTEYSGI+FGLFY+ASYLNLL SSL
Subjt:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

TrEMBL top hitse value%identityAlignment
A0A0A0LK49 NADH dehydrogenase ND1 subunit1.26e-5597.78Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS--LLGSQLNF
        SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS  LLGSQLNF
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS--LLGSQLNF

A0A4S8I4K4 Uncharacterized protein1.17e-5191.86Show/hide
Query:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        M TVISSTVDIVEAQSKYGFWGWNLWRQPIGF++F+ISSLAECERLPFDLPEAEEELVAGYQTEYSGI+FGLFY+ASYLNLL SSL
Subjt:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

A0A4S8I551 Uncharacterized protein7.59e-5291.86Show/hide
Query:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        M TVISSTVDIVEAQSKYGFWGWNLWRQPIGF++F+ISSLAECERLPFDLPEAEEELVAGYQTEYSGI+FGLFY+ASYLNLL SSL
Subjt:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

A0A6A5N1I6 Uncharacterized protein6.20e-5191.86Show/hide
Query:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        M TVI STVDIV+AQSKYGFWGWNLWRQPIG ++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSL
Subjt:  MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

Q95DV4 NADH dehydrogenase ND1 subunit (Fragment)6.30e-5196.3Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY+ASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

SwissProt top hitse value%identityAlignment
A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.8e-4198.77Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGF+IFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

Q0G9Q7 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.4e-4197.53Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.4e-41100Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

Q68RV1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.8e-4198.77Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGF+IFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

Q7YJS9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.4e-4197.53Show/hide
Query:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        SSTVDIVEAQSKYGFWGWNLWRQPIGF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Subjt:  SSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

Arabidopsis top hitse value%identityAlignment
ATCG01100.1 NADH dehydrogenase family protein6.5e-4296.25Show/hide
Query:  STVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
        STVDIVEAQSKYGFWGWNLWRQPIGF+IFLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSL
Subjt:  STVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL

ATMG00516.1 NADH dehydrogenase 1C7.8e-1156.6Show/hide
Query:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS
        V+FLIS LAE  R PFDLPEAE E VAGY  EYS +   LF++  Y N+++ S
Subjt:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS

ATMG01120.1 NADH dehydrogenase 1B7.8e-1156.6Show/hide
Query:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS
        V+FLIS LAE  R PFDLPEAE E VAGY  EYS +   LF++  Y N+++ S
Subjt:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS

ATMG01275.1 NADH dehydrogenase 1A7.8e-1156.6Show/hide
Query:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS
        V+FLIS LAE  R PFDLPEAE E VAGY  EYS +   LF++  Y N+++ S
Subjt:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACAGTGATTTCGAGTACCGTTGATATAGTTGAGGCTCAATCAAAATATGGTTTTTGGGGTTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTCTAAT
TTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCGGGTATAAAATTTGGTTTATTTT
ATGTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTAGGGAGTCAATTAAACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACAGTGATTTCGAGTACCGTTGATATAGTTGAGGCTCAATCAAAATATGGTTTTTGGGGTTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTCTAAT
TTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCGGGTATAAAATTTGGTTTATTTT
ATGTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTAGGGAGTCAATTAAACTTTTAA
Protein sequenceShow/hide protein sequence
MRTVISSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLLGSQLNF