; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G017075 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G017075
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRNA-binding protein 48
Genome locationGy14Chr2:27306492..27310105
RNA-Seq ExpressionCsGy2G017075
SyntenyCsGy2G017075
Gene Ontology termsGO:0005654 - nucleoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034264 - RBM48, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142975.1 RNA-binding protein 48 isoform X2 [Cucumis sativus]6.08e-184100Show/hide
Query:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
        MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
Subjt:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK

Query:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP
        FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP
Subjt:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP

Query:  HVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        HVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  HVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

XP_008444339.1 PREDICTED: RNA-binding protein 48 isoform X1 [Cucumis melo]1.99e-14594.25Show/hide
Query:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF
        MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
        ESL+DTKEKLEVRRREVLARLDSGRPRG+AVSSTTAKLTN SRS+YTL+QKNSLE RNYGDAALIS+PHVSQ+TRVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD

Query:  KIQSSSEHLQAGPASKKSRMDNRRRI
        KIQSSSEHLQAGPASKKSR+DNRRRI
Subjt:  KIQSSSEHLQAGPASKKSRMDNRRRI

XP_011649485.1 RNA-binding protein 48 isoform X1 [Cucumis sativus]4.26e-18299.61Show/hide
Query:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
        MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
Subjt:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK

Query:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEK-RNYGDAALISN
        FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEK RNYGDAALISN
Subjt:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEK-RNYGDAALISN

Query:  PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

XP_031736618.1 RNA-binding protein 48 isoform X3 [Cucumis sativus]1.51e-14999.53Show/hide
Query:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
        MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
Subjt:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK

Query:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEK-RNYGDAALISN
        FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEK RNYGDAALISN
Subjt:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEK-RNYGDAALISN

Query:  PHVSQITRVSSDQ
        PHVSQITRVSSDQ
Subjt:  PHVSQITRVSSDQ

XP_031736619.1 RNA-binding protein 48 isoform X4 [Cucumis sativus]2.16e-151100Show/hide
Query:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
        MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
Subjt:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK

Query:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP
        FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP
Subjt:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP

Query:  HVSQITRVSSDQ
        HVSQITRVSSDQ
Subjt:  HVSQITRVSSDQ

TrEMBL top hitse value%identityAlignment
A0A0A0LQL2 RNA-binding protein 482.94e-184100Show/hide
Query:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
        MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK
Subjt:  MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVK

Query:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP
        FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP
Subjt:  FHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNP

Query:  HVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        HVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  HVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

A0A1S3BA34 RNA-binding protein 489.62e-14694.25Show/hide
Query:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF
        MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
        ESL+DTKEKLEVRRREVLARLDSGRPRG+AVSSTTAKLTN SRS+YTL+QKNSLE RNYGDAALIS+PHVSQ+TRVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD

Query:  KIQSSSEHLQAGPASKKSRMDNRRRI
        KIQSSSEHLQAGPASKKSR+DNRRRI
Subjt:  KIQSSSEHLQAGPASKKSRMDNRRRI

A0A5A7V5K4 RNA-binding protein 489.62e-14694.25Show/hide
Query:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF
        MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
        ESL+DTKEKLEVRRREVLARLDSGRPRG+AVSSTTAKLTN SRS+YTL+QKNSLE RNYGDAALIS+PHVSQ+TRVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD

Query:  KIQSSSEHLQAGPASKKSRMDNRRRI
        KIQSSSEHLQAGPASKKSR+DNRRRI
Subjt:  KIQSSSEHLQAGPASKKSRMDNRRRI

A0A6J1HAQ6 RNA-binding protein 487.68e-13687.61Show/hide
Query:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF
        MP + +E  AVR YT+CDESRYLIVRNVPALGCGD+L KLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+SGRPRG+AV+S T K TN S SHYTL+QK+SLEKRNYGDAAL SNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD

Query:  KIQSSSEHLQAGPASKKSRMDNRRRI
        KIQS SEHL+AGP SK+SR+DNRRRI
Subjt:  KIQSSSEHLQAGPASKKSRMDNRRRI

A0A6J1K7Z4 RNA-binding protein 482.30e-13788.5Show/hide
Query:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF
        MP + +E  AVR YT+CDESRYLIVRNVPALGCGD+L KLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGRPRG+AV+S T K TN S SHYTL+QKNSLEKRNYGDAAL SNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLD

Query:  KIQSSSEHLQAGPASKKSRMDNRRRI
        KIQS SEHL+AGP SK+SR+DNRRRI
Subjt:  KIQSSSEHLQAGPASKKSRMDNRRRI

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 487.4e-2438.24Show/hide
Query:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+ YT+  ESRYL+V+ VPA+G   +L +LF+ YG +EE +P+D    ++FT+VY ++F  +T+AR AKR  DE  F G +L V YAPE+E++ +TK+K
Subjt:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSD
        L+ RRR V              S   AKL +Q ++    +  +S + R      +  NP  ++   V+SD
Subjt:  LEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSD

Q561R3 RNA-binding protein 482.9e-2043.81Show/hide
Query:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+ YT+  ES+YL+++ VPA+G   +L + F+ YG +E+   +D    ++FT+VY +KF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRR
        LE R+
Subjt:  LEVRR

Q5R4U2 RNA-binding protein 485.8e-2136.18Show/hide
Query:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+ YT+  ES+YL+++ VPA+G   +L + F+ YG +E+   +D    ++FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGD
        L+VR+  V+                    T +++ HY  K+K   E ++  D
Subjt:  LEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGD

Q5RL73 RNA-binding protein 482.2e-2035.53Show/hide
Query:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+ YT+  ES+YL+++ VPA+G   +L + F+ YG +E+   +D    ++FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGD
        L++R+  V+                    T +++ HY  K+K   E ++  D
Subjt:  LEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGD

Q8K2X2 RNA-binding protein 488.4e-2042.86Show/hide
Query:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+ YT+  ES+YL+++ VPA+G   +L + F+ YG +E+   +D    ++FT+VY +KF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRR
        L+ R+
Subjt:  LEVRR

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-6352.44Show/hide
Query:  FRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESL
        ++DE+ AVR YTVCDESRY+IVRNVPALGCGDDL +LF +YG +EECKPMDAE+C EFTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++
Subjt:  FRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESL

Query:  LDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQ
         DTK+KLE RR+EVLARL+  + + T+  +  A        + + +++    + + G+A          +TRVSSDQ+YFAS SMNQTV  VREKL+KI+
Subjt:  LDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQ

Query:  SSSEHLQAGPAS-----------------------KKSRMDNRRRI
         S    +  P+S                       K++R+DNRRRI
Subjt:  SSSEHLQAGPAS-----------------------KKSRMDNRRRI

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-6352.44Show/hide
Query:  FRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESL
        ++DE+ AVR YTVCDESRY+IVRNVPALGCGDDL +LF +YG +EECKPMDAE+C EFTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++
Subjt:  FRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESL

Query:  LDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQ
         DTK+KLE RR+EVLARL+  + + T+  +  A        + + +++    + + G+A          +TRVSSDQ+YFAS SMNQTV  VREKL+KI+
Subjt:  LDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQ

Query:  SSSEHLQAGPAS-----------------------KKSRMDNRRRI
         S    +  P+S                       K++R+DNRRRI
Subjt:  SSSEHLQAGPAS-----------------------KKSRMDNRRRI

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein7.5e-5654.13Show/hide
Query:  TVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        +VCDESRY+IVRNVPALGCGDDL +LF +YG +EECKPMDAE+C EFTDVY++KF L+TNA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR
Subjt:  TVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPA
        +EVLARL+  + + T+  +  A        +++ +++    + + G+A          +TRVSS Q+YFAS SMNQ V  VREKL+KI+ S    +  P+
Subjt:  REVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPA

Query:  S------KKSRMDNRRRI
        S      K++R+DNRRRI
Subjt:  S------KKSRMDNRRRI

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein7.5e-5654.13Show/hide
Query:  TVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        +VCDESRY+IVRNVPALGCGDDL +LF +YG +EECKPMDAE+C EFTDVY++KF L+TNA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR
Subjt:  TVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPA
        +EVLARL+  + + T+  +  A        +++ +++    + + G+A          +TRVSS Q+YFAS SMNQ V  VREKL+KI+ S    +  P+
Subjt:  REVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPA

Query:  S------KKSRMDNRRRI
        S      K++R+DNRRRI
Subjt:  S------KKSRMDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGCCAATTGAGAAAAAGGGCGGAGTTAGATTAGATAACTGGAAATTGGAAATCGGAAGTCGAAATTGGGAGAAGACGGGTTGTTGGGGGATGCCTTGTTTTAG
AGACGAGTCCCTTGCGGTTCGCGCCTATACAGTTTGCGATGAGTCAAGGTATTTGATTGTGAGGAACGTCCCGGCATTGGGTTGTGGAGATGACTTGCACAAACTGTTCT
CCTCCTACGGGAACCTTGAAGAGTGTAAACCCATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTTTGCA
AAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTGGAAGTTAGGAGACG
GGAAGTTTTAGCACGATTGGATTCTGGCAGACCAAGAGGAACTGCAGTTAGTTCAACAACCGCAAAGCTTACAAATCAATCTCGCTCTCATTATACTCTTAAACAGAAGA
ACTCCCTTGAAAAGAGGAATTATGGAGACGCAGCACTCATTTCCAATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGATTACTTCGCATCTGAATCTATG
AATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCTGCGAGCAAGAAATCACGTATGGACAATAGGAGGAG
AATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGCCAATTGAGAAAAAGGGCGGAGTTAGATTAGATAACTGGAAATTGGAAATCGGAAGTCGAAATTGGGAGAAGACGGGTTGTTGGGGGATGCCTTGTTTTAG
AGACGAGTCCCTTGCGGTTCGCGCCTATACAGTTTGCGATGAGTCAAGGTATTTGATTGTGAGGAACGTCCCGGCATTGGGTTGTGGAGATGACTTGCACAAACTGTTCT
CCTCCTACGGGAACCTTGAAGAGTGTAAACCCATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTTTGCA
AAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTGGAAGTTAGGAGACG
GGAAGTTTTAGCACGATTGGATTCTGGCAGACCAAGAGGAACTGCAGTTAGTTCAACAACCGCAAAGCTTACAAATCAATCTCGCTCTCATTATACTCTTAAACAGAAGA
ACTCCCTTGAAAAGAGGAATTATGGAGACGCAGCACTCATTTCCAATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGATTACTTCGCATCTGAATCTATG
AATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCTGCGAGCAAGAAATCACGTATGGACAATAGGAGGAG
AATCTAA
Protein sequenceShow/hide protein sequence
MIVPIEKKGGVRLDNWKLEIGSRNWEKTGCWGMPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFA
KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESM
NQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI