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CsGy2G017980 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G017980
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionHomeobox domain-containing protein
Genome locationGy14Chr2:27808752..27810453
RNA-Seq ExpressionCsGy2G017980
SyntenyCsGy2G017980
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060995.1 hypothetical protein E6C27_scaffold501G001300 [Cucumis melo var. makuwa]2.96e-3196.43Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRD
        MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRD

KAF3975862.1 hypothetical protein CMV_000902 [Castanea mollissima]2.32e-1770.37Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK
        MVLRRPG NRS NRENPDILIMM A  QI+RG  +DKG+  E++GMGPLKP T+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK

KAG6626325.1 hypothetical protein CIPAW_15G039900 [Carya illinoinensis]1.41e-1668.52Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK
        M LRRPG NRS NRENPDILI+MIA +QI+RG  +DKGD  +R+GMGPLK A +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK

KAG7029268.1 hypothetical protein SDJN02_07606, partial [Cucurbita argyrosperma subsp. argyrosperma]1.15e-2691.07Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRD
        MVLRR GRNRSFNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKP TK +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRD

KGN62652.2 hypothetical protein Csa_018750 [Cucumis sativus]1.33e-7399.07Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEAGFPIFLSLRESGCSALTSADN
        MVLRRPGRNR+FNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEAGFPIFLSLRESGCSALTSADN
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEAGFPIFLSLRESGCSALTSADN

Query:  HIVEQLTF
        HIVEQLTF
Subjt:  HIVEQLTF

TrEMBL top hitse value%identityAlignment
A0A0A0LN23 Uncharacterized protein2.13e-5198.73Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEA
        MVLRRPGRNR+FNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEA
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEA

A0A0R0JC99 Uncharacterized protein1.61e-1370.37Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK
        M LR P  NRS NRENPDIL MMIA  QIIRG E DK D  ERK MGP+KPAT+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK

A0A2K1WW84 Uncharacterized protein1.84e-1269.23Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPA
        MVLRRP  NRS NRENPDILI+MIA +QI+RG E DK    ER+ MGP KPA
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPA

A0A5A7V591 Uncharacterized protein1.43e-3196.43Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRD
        MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRD

A0A6A5PA14 Homeobox domain-containing protein8.32e-1344.55Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTER-KGMGPLKPATKRDLVW---GFRSKFLILYRMTEIHQMEAGFPIFLSLRESGCSALT
        M LR    NRS NRENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+          R+K+  L   +E+       P+   LRE+  +   
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTER-KGMGPLKPATKRDLVW---GFRSKFLILYRMTEIHQMEAGFPIFLSLRESGCSALT

Query:  SADNHIVEQL
        S  N ++  L
Subjt:  SADNHIVEQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTTGTGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGGATGGGCCCTTTAAAGCCTGCAACAAAGAGGGATTTGGTGTGGGGCTTTCGCTCTAAGTTTCTCATCCTATATAGGATGACAGAGA
TTCATCAAATGGAAGCTGGATTTCCTATCTTTTTAAGTCTGCGGGAGTCTGGATGCTCTGCTCTTACTAGTGCTGATAATCATATAGTTGAACAATTGACATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTTGTGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGGATGGGCCCTTTAAAGCCTGCAACAAAGAGGGATTTGGTGTGGGGCTTTCGCTCTAAGTTTCTCATCCTATATAGGATGACAGAGA
TTCATCAAATGGAAGCTGGATTTCCTATCTTTTTAAGTCTGCGGGAGTCTGGATGCTCTGCTCTTACTAGTGCTGATAATCATATAGTTGAACAATTGACATTTTGA
Protein sequenceShow/hide protein sequence
MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKRDLVWGFRSKFLILYRMTEIHQMEAGFPIFLSLRESGCSALTSADNHIVEQLTF