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CsGy2G019360 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G019360
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCST complex subunit CTC1
Genome locationGy14Chr2:28771904..28772278
RNA-Seq ExpressionCsGy2G019360
SyntenyCsGy2G019360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063096.1 putative transmembrane protein [Cucumis melo var. makuwa]3.73e-7696.77Show/hide
Query:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG
        MS PIEQQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAST AAASSLPAG
Subjt:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG

Query:  TMAVGTQQETKQEEPASQNPSANA
        TMAVGTQQETKQEEPASQNPSANA
Subjt:  TMAVGTQQETKQEEPASQNPSANA

KAG6598392.1 hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sororia]1.27e-5881.75Show/hide
Query:  MSLPIEQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP
        MSLPIEQQSPP  GM   Y GHP SGSVGPVIGVL+VIIVFAVVAVVVGRLCSG SIMGYGHFDLESWAETKCSSCIDGRI+  PPRV+ S    A+SLP
Subjt:  MSLPIEQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP

Query:  AGTMAVGTQQETKQEEPASQNPSANA
         GTMAV TQQETKQEEPASQNP+A+A
Subjt:  AGTMAVGTQQETKQEEPASQNPSANA

XP_022144319.1 uncharacterized protein LOC111014030 [Momordica charantia]8.47e-6082.26Show/hide
Query:  MSLPIEQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP
        MSLPIEQQSPP  GMQQ Y GH  +GSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S    A++LP
Subjt:  MSLPIEQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP

Query:  AGTMAVGTQQETKQEEPASQNPSA
        A TMAV TQQETKQEEPASQNPSA
Subjt:  AGTMAVGTQQETKQEEPASQNPSA

XP_031737057.1 uncharacterized protein LOC116402140 [Cucumis sativus]8.42e-80100Show/hide
Query:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG
        MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG
Subjt:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG

Query:  TMAVGTQQETKQEEPASQNPSANA
        TMAVGTQQETKQEEPASQNPSANA
Subjt:  TMAVGTQQETKQEEPASQNPSANA

XP_038885752.1 uncharacterized protein LOC120076044 [Benincasa hispida]1.60e-6486.72Show/hide
Query:  MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP
        MSLPIEQQSPP   MQQNY GHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI+PPPPRVD    AAA+SLP
Subjt:  MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP

Query:  AGTMAVGTQQETKQE--EPASQNPSANA
        AGTMA   QQETKQE  EPASQNP ANA
Subjt:  AGTMAVGTQQETKQE--EPASQNPSANA

TrEMBL top hitse value%identityAlignment
A0A0A0LP67 Uncharacterized protein4.08e-80100Show/hide
Query:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG
        MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG
Subjt:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG

Query:  TMAVGTQQETKQEEPASQNPSANA
        TMAVGTQQETKQEEPASQNPSANA
Subjt:  TMAVGTQQETKQEEPASQNPSANA

A0A5A7V9H6 Putative transmembrane protein1.81e-7696.77Show/hide
Query:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG
        MS PIEQQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAST AAASSLPAG
Subjt:  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAG

Query:  TMAVGTQQETKQEEPASQNPSANA
        TMAVGTQQETKQEEPASQNPSANA
Subjt:  TMAVGTQQETKQEEPASQNPSANA

A0A6J1CRZ5 uncharacterized protein LOC1110140304.10e-6082.26Show/hide
Query:  MSLPIEQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP
        MSLPIEQQSPP  GMQQ Y GH  +GSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S    A++LP
Subjt:  MSLPIEQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP

Query:  AGTMAVGTQQETKQEEPASQNPSA
        A TMAV TQQETKQEEPASQNPSA
Subjt:  AGTMAVGTQQETKQEEPASQNPSA

A0A6J1KK79 uncharacterized protein LOC1114960284.15e-5277.17Show/hide
Query:  MSLPIEQQSPP--GMQQNYVGHPGSG-SVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSL
        MSLPI+QQSPP  GMQQ Y GH  SG SVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGHFDLE WAE KCSSCIDGRI+ P PRV+ ST  AA+SL
Subjt:  MSLPIEQQSPP--GMQQNYVGHPGSG-SVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSL

Query:  PAGTMAVGTQQETKQEEPASQNPSANA
        PA TM+V TQQ+    EPASQNP  NA
Subjt:  PAGTMAVGTQQETKQEEPASQNPSANA

A0A6J5W971 Uncharacterized protein4.33e-3657.38Show/hide
Query:  MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP
        MS+P++QQ PP   +QQN   H   GS+G V+ VL+V+I+  VVAVV+GRLCSGRSIMGYGH+DLESWAETKCSSCIDGRI PP  R + S ++ ++S P
Subjt:  MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLP

Query:  AGTMAVGTQQETKQEEPASQNP
        A T       E +QEE + Q P
Subjt:  AGTMAVGTQQETKQEEPASQNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein1.3e-1838.57Show/hide
Query:  SLPIEQQSPPGMQ----QNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI---------TPPPPRVDA
        S+P+  Q PP  +     + V   G+ ++GP I V IV+ V  V+A V+GRLCSG++I+GYG +D+E WAE++C SCIDG I         TPPP +   
Subjt:  SLPIEQQSPPGMQ----QNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI---------TPPPPRVDA

Query:  STTAAASSLPAGTMA------VGTQQETKQEEPASQNPSA
         T++  S+   G +A       G +Q++   EP  Q PS+
Subjt:  STTAAASSLPAGTMA------VGTQQETKQEEPASQNPSA

AT3G57500.1 unknown protein2.4e-0741.25Show/hide
Query:  SVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI-----TPPPPRVDASTTAAASSLPA
        S+  ++ VL VI + +V+A V  RLC GR +   G  D+E W E KC SCID  I      P PP      TA   S PA
Subjt:  SVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI-----TPPPPRVDASTTAAASSLPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCAT
TGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTT
GCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACT
AAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCAT
TGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTT
GCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACT
AAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA
Protein sequenceShow/hide protein sequence
MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQET
KQEEPASQNPSANA