; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G019580 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G019580
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionExtensin_2 domain-containing protein
Genome locationGy14Chr2:28894365..28895126
RNA-Seq ExpressionCsGy2G019580
SyntenyCsGy2G019580
Gene Ontology termsGO:0009664 - plant-type cell wall organization (biological process)
GO:0005199 - structural constituent of cell wall (molecular function)
InterPro domainsIPR006706 - Extensin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV24930.1 putative extensin domain-containing protein [Tanacetum cinerariifolium]2.49e-0945.45Show/hide
Query:  HSSVHARE-LKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        H   H +  L +S   +Y++ SPPPPS ++Y SPPPP+  ++ +S PPPP  +++ SPPPPS ++Y SPPPP  V +
Subjt:  HSSVHARE-LKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

KGN62573.1 hypothetical protein Csa_021860 [Cucumis sativus]6.85e-56100Show/hide
Query:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
Subjt:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

PWA69666.1 hypothetical protein CTI12_AA295730 [Artemisia annua]1.81e-1046.05Show/hide
Query:  HSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        H   H     +S + +Y + SPPPPS ++Y SPPPP+  ++ +S PPPP  +++ SPPPPS ++YTSPPPP  V +
Subjt:  HSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

XP_023520927.1 extensin-like [Cucurbita pepo subsp. pepo]1.45e-0943.16Show/hide
Query:  KQSAKSAYLFTSPPPPS----------AFLYLSPPPPARRFLRQSSP------------------PPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        K    +A+LF SPPPP           AFL+LS PPP R F +   P                  PPP+AFLF SPPPP+AFL+ SPPPP    E
Subjt:  KQSAKSAYLFTSPPPPS----------AFLYLSPPPPARRFLRQSSP------------------PPPSAFLFLSPPPPSAFLYTSPPPPASVVE

XP_023909450.1 extensin-3-like [Quercus suber]2.61e-1158.62Show/hide
Query:  SAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA
        S++ F SPPPPS+F + SPPPP+  +    SPPPPS+F F SPPPPS+F + SPPPP+
Subjt:  SAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LLD7 Extensin_2 domain-containing protein3.32e-56100Show/hide
Query:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
Subjt:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

A0A1U7ZTV9 extensin-2-like3.10e-0951.79Show/hide
Query:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA
        YL+ SPPPP  + Y SPPPP   +  +S PPPP  + + SPPPP  + Y SPPPP+
Subjt:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA

A0A2U1N836 Extensin_2 domain-containing protein8.75e-1146.05Show/hide
Query:  HSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        H   H     +S + +Y + SPPPPS ++Y SPPPP+  ++ +S PPPP  +++ SPPPPS ++YTSPPPP  V +
Subjt:  HSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

A0A6J1FAJ8 uncharacterized protein LOC1114439072.96e-0952.24Show/hide
Query:  RELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPAS
        R+LK      Y+++SPPPP  ++Y SPPPP R     SSPPPP  +++ SPPPP  F+Y+SPPPPA+
Subjt:  RELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPAS

A0A7J0E6L4 Proline-rich extensin-like family protein4.25e-0947.62Show/hide
Query:  KQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA
        K     +Y++ SPPPP+ ++Y SPPPP   +  +S PPPP  +++ SPPPP  + Y SPPPPA
Subjt:  KQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA

SwissProt top hitse value%identityAlignment
O65375 Leucine-rich repeat extensin-like protein 11.6e-0552.73Show/hide
Query:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        Y+++SPPPP  ++Y SPPPP   +   SSPPPP  +++ SPPPP  ++Y+SPPPP
Subjt:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

P06599 Extensin5.3e-0439.19Show/hide
Query:  YLFTSPPPPSAF---------LYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPS-------AFLYTSPPPPASV
        Y + SPPPP  F          Y SPPPP   +  +S PPP   + + SPPPP         + Y SPPPP  V
Subjt:  YLFTSPPPPSAF---------LYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPS-------AFLYTSPPPPASV

Q9FS16 Extensin-31.8e-0441.18Show/hide
Query:  KSAYLFTSPPPPSAF-----LYLSPPPPARRFLRQSSPPPPSAF----LFLSPPPP-SAFLYTSPPPP
        K  Y++ SPPPP        +Y SPPPP + ++ +S PPP   +    ++ SPPPP   ++Y SPPPP
Subjt:  KSAYLFTSPPPPSAF-----LYLSPPPPARRFLRQSSPPPPSAF----LFLSPPPP-SAFLYTSPPPP

Q9SN46 Leucine-rich repeat extensin-like protein 56.9e-0449.02Show/hide
Query:  SPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        SPPPP    Y  PPPP+      S PP P  + + SPPPP A  Y+ PPPP
Subjt:  SPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

Q9T0K5 Leucine-rich repeat extensin-like protein 31.4e-0450.94Show/hide
Query:  FTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        ++ PPPP    Y SPPPP    +  SSPPPP  + + SPPPP    Y+SPPPP
Subjt:  FTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 11.2e-0652.73Show/hide
Query:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        Y+++SPPPP  ++Y SPPPP   +   SSPPPP  +++ SPPPP  ++Y+SPPPP
Subjt:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

AT1G26240.1 Proline-rich extensin-like family protein6.9e-0750Show/hide
Query:  SAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        S Y++ SPPPP  ++Y SPPPP   ++ +S PPPP  +++ SPPPP  ++Y SPPPP  V
Subjt:  SAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

AT1G26250.1 Proline-rich extensin-like family protein1.4e-0750Show/hide
Query:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        Y+++SPPPP  ++Y SPPPP   +    SPPPP  +++ SPPPP  ++Y+SPPPP  V
Subjt:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

AT4G08370.1 Proline-rich extensin-like family protein1.1e-0750Show/hide
Query:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        Y++ SPPPP  ++Y SPP P   ++ +S PPPP  F++ SPPPP+ ++Y SPPPP  V
Subjt:  YLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

AT4G13340.1 Leucine-rich repeat (LRR) family protein9.9e-0650.94Show/hide
Query:  FTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        ++ PPPP    Y SPPPP    +  SSPPPP  + + SPPPP    Y+SPPPP
Subjt:  FTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGTGTAGGGTTGTTTCTCCTCTTCCTTTCCCTTCTCTCCTTTTTCTCTCATTCATCTGTCCATGCCCGCGAGCTGAAGCAATCTGCCAAATCTGCCTATCTCTT
CACCTCTCCGCCGCCTCCCTCTGCATTCCTCTACCTCTCCCCACCACCTCCTGCTAGACGCTTCTTAAGACAGTCTTCGCCTCCGCCTCCGTCGGCCTTCTTGTTTCTTT
CTCCGCCACCTCCTTCTGCGTTTCTGTATACCTCTCCGCCGCCGCCGGCGTCGGTGGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
GGTAATTATAAATTGAATTAAAGGTTGAAATTGTGATATCTTAGGTGTATTGTTAATACCAAATATGTAAAAGTGTTAATATAAATAATTGACGTTAGGTTTGAATTTGA
GATACAATCTTCATACTCATATTGGATCAAGAAAATGAACGGTGTAGGGTTGTTTCTCCTCTTCCTTTCCCTTCTCTCCTTTTTCTCTCATTCATCTGTCCATGCCCGCG
AGCTGAAGCAATCTGCCAAATCTGCCTATCTCTTCACCTCTCCGCCGCCTCCCTCTGCATTCCTCTACCTCTCCCCACCACCTCCTGCTAGACGCTTCTTAAGACAGTCT
TCGCCTCCGCCTCCGTCGGCCTTCTTGTTTCTTTCTCCGCCACCTCCTTCTGCGTTTCTGTATACCTCTCCGCCGCCGCCGGCGTCGGTGGTGGAGTGATGGGTGTGATG
AGATGGGCTTTTTCGTAGCGAAGGCCCATTTATTATTGTAAGGTAACACACAAATGTGATGTAATTTGTGTGTAGTTTTTAGAATATTAATTGTGAGTCTCTCTCTCTAA
ATGTTTAGTCTAAGAAACAACTATATAGCATTTGAAGATGTATGGAGACCTTATGTGAACCAATAATGGAATTTTATGAATAAAATTAATTGATTCCAAGTTCGAACGAT
TCTCTTAATCATGGAAAGAGTCCTAAAACGACTTCGTACTACAAATATTTGCATTTCCATCTTTTATTTGATTAGTAACCTTTTTTTTTTTTTTTTTTTTGT
Protein sequenceShow/hide protein sequence
MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPSAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE