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CsGy2G019780 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G019780
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSANT domain-containing protein
Genome locationGy14Chr2:29006945..29007247
RNA-Seq ExpressionCsGy2G019780
SyntenyCsGy2G019780
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065236.1 protein RADIALIS-like 4 [Cucumis melo var. makuwa]1.30e-4497.33Show/hide
Query:  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSL
        MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNN F+DEEQRQSL
Subjt:  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSL

KAE8652106.1 hypothetical protein Csa_022050 [Cucumis sativus]1.14e-44100Show/hide
Query:  VYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF
        VYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF
Subjt:  VYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF

XP_008444713.1 PREDICTED: protein RADIALIS-like 4 [Cucumis melo]2.05e-5397.87Show/hide
Query:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR
        MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNN F+DEEQR
Subjt:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR

XP_031737271.1 protein RADIALIS-like 4 [Cucumis sativus]1.88e-56100Show/hide
Query:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR
        MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR
Subjt:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR

XP_038886301.1 protein RADIALIS-like 3 [Benincasa hispida]5.06e-4789.01Show/hide
Query:  STTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR
        S+ SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLA A+GGKTA+EVK HY+MLVEDVHNIETG+VPLPNYSKHYSYNN F+DEEQR
Subjt:  STTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR

TrEMBL top hitse value%identityAlignment
A0A0A0LNL9 SANT domain-containing protein1.16e-61100Show/hide
Query:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF
        MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF
Subjt:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF

A0A1S3BBR2 protein RADIALIS-like 49.94e-5497.87Show/hide
Query:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR
        MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNN F+DEEQR
Subjt:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR

A0A5A7VFX7 Protein RADIALIS-like 46.27e-4597.33Show/hide
Query:  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSL
        MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNN F+DEEQRQSL
Subjt:  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSL

A0A6J1K580 protein RADIALIS-like 43.85e-4283.87Show/hide
Query:  TTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSK---HYSYNNNFVDEEQR
        T+SSSSSSSS WSSKQNK+FENALTVYDKDSPDRWQKLA +VGGKTA+EVKRHYEMLVEDVHNIETG+VPLPNYSK   H S +N F+DEEQR
Subjt:  TTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSK---HYSYNNNFVDEEQR

A0A6J1KQS6 protein RADIALIS-like 41.77e-4080.43Show/hide
Query:  STTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYS-YNNNFVDEEQR
        S++SSSSSSS+ WSSKQNK+FENALTVYDKDSPDRWQKLA AVGGKTA+EVKRHYEMLVEDVHNIE G++PLPNYS     Y +NF+DEEQR
Subjt:  STTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYS-YNNNFVDEEQR

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 16.6e-2154.74Show/hide
Query:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ
        MASS  S SS SS SW++KQNK FE AL  YD+D+P+RWQ +A+ VGGKT +EVKRHYE+LV+D+++IE G VP PNY       N  + +E+++
Subjt:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ

Q1A173 Protein RADIALIS-like 61.6e-2260.67Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ
        S+S SS S W+  QNKMFE AL VYDKD+PDRW  +A+AVGGKT +EVKRHY++LVED+ NIETG+VPLPNY    S + +  D + R+
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ

Q1G3C4 Protein RADIALIS-like 43.6e-1961.11Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY
        +SSS S+SSW+++++K FE AL  +DKD+PDRWQK+ARAVGGK+ +EVKRHYE+L+ DV++IE+G+ P P Y
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY

Q6NNN0 Protein RADIALIS-like 33.3e-2062.5Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY
        S+S SSS+SW+ K+NK+FE AL  YD+D+PDRW  +ARAVGGK+A+EV+RHYE+L+ DV++IE+G+ P PNY
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY

Q8GW75 Protein RADIALIS-like 52.7e-2273.61Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY
        SSS SSSSSW+SKQNKMFE AL VYDKD+PDRWQ +A+AVG K+A+EVKRHY++LVED+ NIE   VPLP Y
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 51.9e-2373.61Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY
        SSS SSSSSW+SKQNKMFE AL VYDKD+PDRWQ +A+AVG K+A+EVKRHY++LVED+ NIE   VPLP Y
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY

AT1G75250.1 RAD-like 61.5e-2361.36Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR
        S+S SS S W+  QNKMFE AL VYDKD+PDRW  +A+AVGGKT +EVKRHY++LVED+ NIETG+VPLPNY    S + +  D + R
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQR

AT1G75250.2 RAD-like 61.1e-2360.67Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ
        S+S SS S W+  QNKMFE AL VYDKD+PDRW  +A+AVGGKT +EVKRHY++LVED+ NIETG+VPLPNY    S + +  D + R+
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ

AT2G18328.1 RAD-like 42.6e-2061.11Show/hide
Query:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY
        +SSS S+SSW+++++K FE AL  +DKD+PDRWQK+ARAVGGK+ +EVKRHYE+L+ DV++IE+G+ P P Y
Subjt:  SSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNY

AT4G39250.1 RAD-like 14.7e-2254.74Show/hide
Query:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ
        MASS  S SS SS SW++KQNK FE AL  YD+D+P+RWQ +A+ VGGKT +EVKRHYE+LV+D+++IE G VP PNY       N  + +E+++
Subjt:  MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCTACTACTTCTTCTTCTTCATCTTCATCTTCAAGCTGGAGTTCAAAGCAAAACAAAATGTTTGAAAATGCCCTTACAGTGTACGACAAGGACTCGCCCGA
CCGGTGGCAGAAGCTGGCAAGAGCAGTCGGCGGGAAGACGGCAGACGAGGTGAAGAGACACTATGAGATGCTGGTTGAGGACGTCCATAATATTGAGACTGGCAAAGTTC
CTTTGCCTAATTACTCTAAACATTATTCTTACAACAACAACTTTGTTGATGAAGAACAAAGGCAATCTCTCTTTCACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCATCTACTACTTCTTCTTCTTCATCTTCATCTTCAAGCTGGAGTTCAAAGCAAAACAAAATGTTTGAAAATGCCCTTACAGTGTACGACAAGGACTCGCCCGA
CCGGTGGCAGAAGCTGGCAAGAGCAGTCGGCGGGAAGACGGCAGACGAGGTGAAGAGACACTATGAGATGCTGGTTGAGGACGTCCATAATATTGAGACTGGCAAAGTTC
CTTTGCCTAATTACTCTAAACATTATTCTTACAACAACAACTTTGTTGATGAAGAACAAAGGCAATCTCTCTTTCACTTTTAA
Protein sequenceShow/hide protein sequence
MASSTTSSSSSSSSSWSSKQNKMFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKVPLPNYSKHYSYNNNFVDEEQRQSLFHF