; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G021230 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G021230
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCHCH domain-containing protein
Genome locationGy14Chr2:29915070..29918773
RNA-Seq ExpressionCsGy2G021230
SyntenyCsGy2G021230
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]3.58e-6199.01Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]1.03e-6098.02Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVA+NSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]2.52e-61100Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]6.83e-5795.1Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS  SSAPSVASN GGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVL
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]1.98e-5895.05Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSS SSAPSVA+N GGSDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein1.22e-61100Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like4.97e-6198.02Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVA+NSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 101.73e-6199.01Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial3.31e-5795.1Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS  SSAPSVASN GGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVL
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like2.71e-5694.12Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS  SSAPSVA N GGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVL
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein3.4e-2858Show/hide
Query:  LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        LG +GA+I +G+A+GTG+A  HR VD+VMGPRT +HETV S   SA +  +      AC++ SK+FQDC+NH+GSDISKCQFY+DML EC+++SGSV+ A
Subjt:  LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)3.0e-3267.65Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE V+ +SAS+AP  A ++  S  C++ +K+FQDC+  YGS+ISKCQFY+DML ECR++SGSV+
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)6.7e-1665.71Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSGGSDACNVQSKSFQD
        M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE V+ +SAS+AP  A ++  S  C++ +K+FQD
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSGGSDACNVQSKSFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGAGGTCTTGGTGCAACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTCGATGCCGTAATGGGTCCTCGAACCATCCAGCA
TGAGACTGTTGATTCGTCAGCCTCCTCAGCACCTTCTGTTGCAAGCAATTCTGGTGGTTCTGATGCTTGTAATGTTCAGTCAAAATCCTTTCAAGATTGCCTGAACCACT
ATGGAAGTGACATTAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAGTGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAAATTAATCCGAAACTCCTAGACTCTGGGGCTCTATATAAACCCCAACAAAGTAAAATTCGTCCGCAAATCATTAACCCTAAAATTTCCGATATCGTTACTGCTAGA
GACCGCCACCGCCATTTTCTTTTACATTTCTTCTACGCAGTCGCCCTTTCTTTTAATCCTTAACCATGCCTCGTCGTAGCTCCGGTGGTTAGTATTTCGTACATTTTCCC
TTTATATTTTCATATGTGACTAGTTATTCCTTTTTTCAGATTGATTCATCCGGCCAGTTTTTGTTTTCCGTTCTTTTTTCCTCGTTTATCTACCTATTTATATTTCTGGC
GATGGTTTTGTATGAATAGTTGGATTGGGTTTCTAGCTTAGGGAAGTTCTTGATTTTTTGGATCTGATTTTACGACAAGATTGTTTACAATTTTCTTGTGGGGGGAGGGG
ACAAAACTAGGGTTTGAAGTTGAAGCGTTTGCATGCTTTAGGTTTTAGAAATTATGTGATTGCGATAGTTAATCTCTCTGTTGCATGTGCTAAGTGGTTGACCTTCGATT
ATTTTGCAGGACGATCTGCTTCCCGTCCCGCCCCACGCGCTCCACTTCGCAATCCTCCGGCGCCAGCTAGTCCCGCTCCTCCACCTGCACCTGTACAAGGTGGTGGTGGT
GGTTCTATGCTTGGAGGTCTTGGTGCAACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTCGATGCCGTAATGGGTCCTCGAACCAT
CCAGCATGAGACTGTTGATTCGTCAGCCTCCTCAGCACCTTCTGTTGCAAGCAATTCTGGTGGTTCTGATGCTTGTAATGTTCAGTCAAAATCCTTTCAAGATTGCCTGA
ACCACTATGGAAGTGACATTAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAGTGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAAAATAATTGATTTTAGAAC
AATCGTTATTCACTATTTTTCATTTGGATGTAACCGCAAGGAGCGGTGTCAAGTTTATTGTGTGTTTCGACTGTTTACACTTTATTACGGCAACTTCTCTACAATTATAA
ATGGTGTTTAATAATGAAATATTTCATCATTTGGACTCAATTGTTATGGCTTTTGTGTTTTTGTGTCTTTCCTTGTGAACTTAAAATTGATGTTTGGATTATTAAACGAA
CACATCTACTTGATGAATAAAGGAAAAATAACATTATTAGATCTTTTTTATTACAATCACACCCATACAGAAGATCTAATATTGGGTGTGTAATTGGCTTTTGTCTCATT
CAAGATATAATAAGACAGCTATGTGTATTTTCTTTTTAAACGCTCGAATATTTCTATTTTGTTACGTTTAGGTTGAGGTGAATTGGAACGTTGGACTGAATGTGGATGGT
TTAAGTTTGAGAATTGAATCGATTAAATTTGTAGTTGAAGCTTAAAATCAATTACGAATGCCAAGTTTTGGCTTTACGTTGAAGAATTTAAAATGTAAGAACCATAGTAC
CCGTGACAGCAAGGCCTCAATGTCATTGGTGTTACTTTTCTTTTTGTTTTCTTACTTTTGTTTCTTTCTACATTAATCTGAGTAAGCTTACTTTTCACACTTACAATTTT
ACGTTCGGTATTACTAACTTTATCGTCCAAAATAGAAGCACTGTGGTTTTTTTTTTTTTTGTTTTATTGATCATCTTCATTATATGACATTAAAGTTTTGAGTGAATGAT
ATCACATGTTAATGTTTGTTTATTCCACAAATCTCAATAATAAGGCTGTGAAATCAAGAATAACAATGGAATATTCGATCTTGACTGTTTGGTCAGTGTAGGATGTATAC
AGTGTTACAATCATAGCGTTTCAACCTCGAGATGATATGTCTGTGACACACAGCACATATGACCTATGAATATGCATATAGTTTATTCATGTTAGATTTTTGTATGAGAT
TTGATCCAGCTTTTGATAACTAGGTTTTCTGGTGGTCCTTTGCTTGCGTATGGTTGGGTGAATTTGCCAAAATAACTAAATTGAACACCGGATTTGCTCCCTTTTGATTT
CCACTTGCTCCTCTACTCCTGAATCAATCTAATTGCGATTAAAAATTACATTGGAAGATATAACTATTTTAGTTCGTTAGAAAATTATTATGTCAAGATTATTGTTATTT
GTGATACCAATCATAGTCAAATT
Protein sequenceShow/hide protein sequence
MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA