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CsGy2G021785 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G021785
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPolynucleotide adenylyltransferase
Genome locationGy14Chr2:30341324..30341599
RNA-Seq ExpressionCsGy2G021785
SyntenyCsGy2G021785
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0031123 - RNA 3'-end processing (biological process)
GO:0043631 - RNA polyadenylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004652 - polynucleotide adenylyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065055.1 nuclear poly(A) polymerase 4 isoform X3 [Cucumis melo var. makuwa]6.76e-2887.1Show/hide
Query:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
        K LK CMQCFEESGA HFRCLA EPSQLPIFRRWEILCEGTA  VVSG NAIY SKTFNLAV
Subjt:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
KAG7029706.1 Nuclear poly(A) polymerase 4 [Cucurbita argyrosperma subsp. argyrosperma]1.23e-0473.08Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKQQ
        +AWW GI FSSNMLF+VL+HGNP++Q
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKQQ
KGN62795.1 hypothetical protein Csa_022232 [Cucumis sativus]1.14e-66100Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
        MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
TrEMBL top hitse value%identityAlignment
A0A0A0LLH3 Uncharacterized protein5.54e-67100Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
        MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
A0A5A7VGN2 Polynucleotide adenylyltransferase3.27e-2887.1Show/hide
Query:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
        K LK CMQCFEESGA HFRCLA EPSQLPIFRRWEILCEGTA  VVSG NAIY SKTFNLAV
Subjt:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGTGGCATGGCATATGGTTCAGCTCCAATATGCTGTTTATTGTCCTTGATCATGGGAATCCGAAGCAGCAGTGTTGGGGAAAAAACCTTAAAGACTGCATGCA
ATGCTTTGAAGAATCTGGTGCATTTCATTTTAGATGCCTGGCACTCGAACCTTCACAGCTTCCCATTTTTAGAAGATGGGAGATTCTTTGTGAAGGAACTGCTCATGCGG
TCGTTTCTGGGGTGAATGCAATCTACACTTCCAAGACCTTCAATCTTGCAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGTGGCATGGCATATGGTTCAGCTCCAATATGCTGTTTATTGTCCTTGATCATGGGAATCCGAAGCAGCAGTGTTGGGGAAAAAACCTTAAAGACTGCATGCA
ATGCTTTGAAGAATCTGGTGCATTTCATTTTAGATGCCTGGCACTCGAACCTTCACAGCTTCCCATTTTTAGAAGATGGGAGATTCTTTGTGAAGGAACTGCTCATGCGG
TCGTTTCTGGGGTGAATGCAATCTACACTTCCAAGACCTTCAATCTTGCAGTTTAA
Protein sequenceShow/hide protein sequence
MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGVNAIYTSKTFNLAV