CuGenDBv2

Gene ID	CsGy2G022610
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	selenoprotein H
Genome location	Gy14Chr2:30888703..30894484
RNA-Seq Expression	CsGy2G022610
Synteny	CsGy2G022610
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064988.1 selenoprotein H [Cucumis melo var. makuwa]

3.24e-69

93.6

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDK
        KRAIQVQTGLENGVPGITVLLNPDK
Subjt:  KRAIQVQTGLENGVPGITVLLNPDK

KAE8652181.1 hypothetical protein Csa_022241 [Cucumis sativus]

5.05e-91

100

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

XP_004138763.1 selenoprotein H [Cucumis sativus]

3.83e-92

100

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

XP_008445096.1 PREDICTED: selenoprotein H [Cucumis melo]

1.36e-85

93.79

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLL
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

XP_038886764.1 selenoprotein H [Benincasa hispida]

9.09e-71

80.54

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAPRKR+KNQE++   EK APA+SR+TRSSARLAANSKAD  V    TE  KSKKAKRAPKENGKV+EVEN+ V+VD  L KLDKD K+RTVVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        QSFKKRAIQVQ GLENGVPGITV+LNPD PRRGCFEIRSEDGEKFISLL
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC9 Uncharacterized protein

1.86e-92

100

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

A0A1S3BBW1 selenoprotein H

6.59e-86

93.79

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLL
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

A0A5A7VBJ3 Selenoprotein H

1.57e-69

93.6

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDK
        KRAIQVQTGLENGVPGITVLLNPDK
Subjt:  KRAIQVQTGLENGVPGITVLLNPDK

A0A6J1GHC6 selenoprotein H-like isoform X2

2.06e-64

73.33

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAP+KR+K QE++  V KP PA+SR+TR S RLA NSKADLTV E    LPK KKAKR PKENGK EEVEN+   +D    KL  +AK+R VVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLV
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLV
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLV

A0A6J1GHF7 selenoprotein H-like isoform X1

1.77e-63

73.15

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAP+KR+K QE++  V KP PA+SR+TR S RLA NSKADLTV E    LPK KKAKR PKENGK EEVEN+   +D    KL  +AK+R VVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

SwissProt top hits

e value

%identity

Alignment

Q3UQA7 Selenoprotein H

3.0e-05

41.07

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Query:  KLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI
        K +K A+  TVVIEHC   + + + A  +   L+   P + V +NP KPRRG FE+
Subjt:  KLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI

Arabidopsis top hits

e value

%identity

Alignment

AT2G24440.1 selenium binding

4.7e-22

47.41

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Query:  RLTRSSARLAANSKADLTVTELPKSKKAKR-------APKENGKVEEV-----ENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLEN
        R TRS  +    S + L   E P+ KK K        A K+  K EEV     + +E   D    + D D+  + +VIEHCKQC+SFK+RA +V+ GLE 
Subjt:  RLTRSSARLAANSKADLTVTELPKSKKAKR-------APKENGKVEEV-----ENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLEN

Query:  GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLVI
         VPGI V +NPDKPRRGCFEIR E GE FISLL +
Subjt:  GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLVI

AT4G31360.1 selenium binding

9.5e-23

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Query:  PRKRTKNQEEDLVVEKPAPATSRLTRS------SARLAANSKADLTVTELPKSKKAKR--------APKENGKVEEVENKEVKVDVGLGKLDKDAKSRT-
        P K++K   E+        A+SR+TRS      S      +KA  + T+ P +KKAKR          K+  K EEVE  E  V+  + K + + +  T 
Subjt:  PRKRTKNQEEDLVVEKPAPATSRLTRS------SARLAANSKADLTVTELPKSKKAKR--------APKENGKVEEVENKEVKVDVGLGKLDKDAKSRT-

Query:  --VVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL
          +VIEHCKQC +FK RAIQV+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL
Subjt:  --VVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLL

Sequences

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CDS sequence

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ATGGCGCCCAGGAAGCGAACCAAGAACCAAGAAGAAGACCTGGTGGTGGAGAAGCCGGCCCCGGCGACGTCCAGATTGACTCGGAGTTCCGCTCGCCTGGCGGCG
AACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGTTGAGGAGGTTGAAAATAAGGAAGTG
AAAGTTGATGTTGGTTTGGGGAAACTTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATTCAG
GTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCTGATAAGCCAAGAAGGGGTTGCTTTGAAATCCGAAGCGAAGATGGGGAGAAG
TTTATCAGTCTTCTGGTAATTATCACCTTCAACTTCAATTGTAAAAAAAATTATTTCCGATTATCTGGAAATTTGTCAAGTATTCAAGCTCAATGA

mRNA sequence

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GACGTGACAATAAATGATAGTGGAGACTGGCGCCATTTCTGGGACTTCGTGCCGCCACTTTCTTCCAAAGAAGAAACCAAGTGGAACCGCGTGGGCGTCGTACCA
CCACCCAGTCAACGGCCTCGATCCCCTCTCACACTCTAAATCCATCTCCACCGTTTCTTCAAATTCTCACCGCCGTCCCCTAGGGCGGGAAAACACCCACCCCCC
CCAACTCCGCTTCTGTATATCACTACAAACCAACGGTCACACCTTCGAAAACCCACCCATAACTTTACCTTCTTCCTCATACTTCCTCTTTTTTATTTTCCTTTC
TAGGGTTTCACTTCTCCTTTCATGGCGCCCAGGAAGCGAACCAAGAACCAAGAAGAAGACCTGGTGGTGGAGAAGCCGGCCCCGGCGACGTCCAGATTGACTCGG
AGTTCCGCTCGCCTGGCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGTTGAG
GAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGGGAAACTTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCA
TTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCTGATAAGCCAAGAAGGGGTTGCTTTGAAATC
CGAAGCGAAGATGGGGAGAAGTTTATCAGTCTTCTGGTAATTATCACCTTCAACTTCAATTGTAAAAAAAATTATTTCCGATTATCTGGAAATTTGTCAAGTATT
CAAGCTCAATGATTTAGGATCTATTTACTGATAGGACATGAAGCGTCCATTTACCCGCATGAAGGAACTGAACATGGATGAAGTCATTTCAGATATCATTGAGAA
GATAAAAGGATGATGAAGGGCTTTAATGAAAAATTGCCTTTCTAAGGATGCAATGGTTTTTTTTTTTGTGGTGGTTTGAAGCTAACCAACTAGAGTACCTTTGAT
GGTGGAAAACTTGCTAATGATCATTTGCCAATGTCAATATTGCCTCCTCGCTTGGGATAACTGCAATGGTAAAGCCATCAGGTTTGAACAAACATGGTGAAATAT
TTTTTTGGTTTAAGCTTCATAATGAACGAGTCTATCTTTGAAGAAGACTTGTCCTTTGTATTAGTAGCAGTAGAAACCTACCCTTACCTAAGATGAGGGTGGCTC
TATATTGCATCCTTGAATTGTGTATTTTTGTGTGAATCAATGGAGTTTTATTTGCACCTTTTTTTTTCTTGTATAAGAGATCTAAGCCAGAAAACTAGGAGAGAT
TCCTTTATCCCAACTATGTCCCTAAGGCAAGATAAGGATTAGAGATGAGCATTGGTTGGTTTGCTTTGGTTTTGTGCTCAAATTGATTTCGAACATCAATTTGTT
GATTTTAACGAGTCTTGGTTGTTGATTTTGGAAGGATCTATTGAACCAACTGGTCTACTACATGGATGGTTGGTCAGTTGGTCTTAGTTAGTTGCTTATGGAACG
AAACTTTGTTGGAGTTGAGAAGGAAAGGTAGGTATGGTGGTGTTGGCCTCCAATGAAGAGACGATTGGGACACTTGAAGAAATGATTAATTTATTAATTAGTTTA
AATAGGCATTTATTACCTATCAAAATCTTGTTTTTGAGCTCTACATTGCATAATTTTTGTTTCTCTTTTATTTTTTGTTTTTACCTTTGCAACAATTGATTGGTT
GATTAAGTCTTTTTTTTTAGTTCACTGGCTGTCGAGGGCATAGAATCAATTGTCTTATGTCAATTTTACGACTTGAGTTGATCACTCCTAGAACGACGTATTAGA
GACTTTTCGAAATGCAACTTTTGTCAAAGCATCAACCAAGCAATTGTATTGCCCACTTGAAGTTGTTATTAAGGTCTATGGAAGTTCGAATTCAAAAACCCCATA
TCTACGACCTTGATGTTGATTGCACAAGTGTAATGGATTTTGGAAAGTTTGGTCTTTGAGATGTACTACTTAACAATGTTGAAACATGCACAATATGATTTTAAG
TGTGTTGGATTTTTAGTTGTTATTCTTCATAAGCTTGGTCTTTTGGAATGTACCATAGCAAGATACATGTGAGATTAGACATAAAAAAATCATACCATAATTATA
TGTCAAGTAAAGTAAATTCTATATTTGAAAGTGTACAAAAACAACTAATTCTTTAACTACATAATTTTGCACGAAAAGGTACTAAATGGTAGTTGGCAAGTTATA
GGGCATCACCGCATTGACGTCCAAAAAAAAATATGGTCGATTGATTGATATATATGATTCCAAGAAATAATATGAAACAAATTTAATGTCATTTTCGGATTGACT
ATAAAAAACCATTTTAAGAGAAC

Protein sequence

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MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQ
VQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLVIITFNFNCKKNYFRLSGNLSSIQAQ

CsGy2G022610 (gene) of Cucumber (Gy14) v2.1 genome