CuGenDBv2

Gene ID	CsGy2G022730
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	psbP domain-containing protein 5, chloroplastic
Genome location	Gy14Chr2:30971869..30975282
RNA-Seq Expression	CsGy2G022730
Synteny	CsGy2G022730
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0009654 - photosystem II oxygen evolving complex (cellular component) GO:0019898 - extrinsic component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138754.1 psbP domain-containing protein 5, chloroplastic [Cucumis sativus]

1.41e-138

99.05

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Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALLNSSLSVSTSTNVSLPNLPFFR QPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDTNSSN+
Subjt:  SVLDTNSSNV

XP_008445125.1 PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X1 [Cucumis melo]

1.35e-129

92.86

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Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALL SSLSVSTSTN SLPNLPFFR QPKNLPCRKRIGMY KFN+CST ISKPTSE+G  RR+LLLFGLTSSVAL FPSLGSLAEEELK+ATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYP+ELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSI+IKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDTNSSN+
Subjt:  SVLDTNSSNV

XP_016900021.1 PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X2 [Cucumis melo]

2.81e-126

91.9

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Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALL SSLSVSTSTN SLPNLPFFR QPKNLPCRKRIGMY KFN+CST ISKPTSE+G  RR+LLLFGLTSSVAL FPSLGSLAEEELK+ATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYP+ELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIIS  IGPPNSI+IKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDTNSSN+
Subjt:  SVLDTNSSNV

XP_023545350.1 psbP domain-containing protein 5, chloroplastic [Cucurbita pepo subsp. pepo]

3.01e-119

86.67

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Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALLNSSLSVST TN SLPNL FF  +P NLP RK IG+YKKFN+CSTSISK TSEN  SRRDLLLFGL+SS  L+FPSLGSLAEEELKAATMVDE+NAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SY YPLEL STNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDF+DNLIISVTIGPPNS++IKSKDKSTW AKDVADSVLSDKSALRVTSSQR+AES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDT+SSN+
Subjt:  SVLDTNSSNV

XP_038884128.1 psbP domain-containing protein 5, chloroplastic [Benincasa hispida]

7.06e-125

89.52

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Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALLNSSLSVST TN S PNLPFFR +P+NLPCRKRI MYKKFN+CSTSISKPTSENG  RRDLLLFGL+SS  LSFPS  SLAEEELKAATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYP+ELSS+NFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNS++IKSKDKSTWAAKDVADSVLSDKSALRVTSSQR+AES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDT+SSN+
Subjt:  SVLDTNSSNV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM60 PsbP domain-containing protein

3.37e-139

99.05

Show/hide

Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALLNSSLSVSTSTNVSLPNLPFFR QPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDTNSSN+
Subjt:  SVLDTNSSNV

A0A1S4DVK9 psbP domain-containing protein 5, chloroplastic isoform X2

1.36e-126

91.9

Show/hide

Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALL SSLSVSTSTN SLPNLPFFR QPKNLPCRKRIGMY KFN+CST ISKPTSE+G  RR+LLLFGLTSSVAL FPSLGSLAEEELK+ATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYP+ELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIIS  IGPPNSI+IKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDTNSSN+
Subjt:  SVLDTNSSNV

A0A1S4DWE4 psbP domain-containing protein 5, chloroplastic isoform X1

6.55e-130

92.86

Show/hide

Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALL SSLSVSTSTN SLPNLPFFR QPKNLPCRKRIGMY KFN+CST ISKPTSE+G  RR+LLLFGLTSSVAL FPSLGSLAEEELK+ATMVDEINAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SYTYP+ELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSI+IKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDTNSSN+
Subjt:  SVLDTNSSNV

A0A6J1EN40 psbP domain-containing protein 5, chloroplastic

8.40e-119

86.19

Show/hide

Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALLNSSLSVST TN SLPNL FF  +P+NLP RK IGMYKK ++CSTSISK TSEN  SRRDLLLFGL+SS  L+FPSLGSLAEE+LKAATMVDE+NAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SY YPLEL STNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNS++IKSKDKSTW AKDVADSVLSDKSALRVTSSQR+AES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDT+SSN+
Subjt:  SVLDTNSSNV

A0A6J1K7I1 psbP domain-containing protein 5, chloroplastic

8.40e-119

86.19

Show/hide

Query:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY
        MALLNSSLS ST TN SLPNL FFR +P++LP RK IGMYKKFN+CSTSISK TS N  SRRDLLLFGL+SS  L+FPSLGSLAEEELKAATMVDE+NAY
Subjt:  MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAY

Query:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES
        SY YPLEL STNF+FKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNS++IKSKDKSTW AKDVADSVLSDKSALRVTSSQR+AES
Subjt:  SYTYPLELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAES

Query:  SVLDTNSSNV
        SVLDT+SSN+
Subjt:  SVLDTNSSNV

SwissProt top hits

e value

%identity

Alignment

P82715 PsbP domain-containing protein 5, chloroplastic

6.9e-52

57.64

Show/hide

Query:  PNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSIS--KPTSENGLSRRDLLLFGLTSSVALSFPSLG---------SLAEEELKAATMVDEINAYSYTYPLE
        PN   FR +  N+   K  G  K+  +  + +S    +SE GLSRRDL+L GL+S +++  P             ++ EELK  TMVD+INAYSY YPL+
Subjt:  PNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSIS--KPTSENGLSRRDLLLFGLTSSVALSFPSLG---------SLAEEELKAATMVDEINAYSYTYPLE

Query:  LSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAESSVLDTNS
          S    FKWVESRKPERYSSAAPLSPDARLRIVSERVD  DNL+IS++IGPPNS  + SK+K TW+AK+VADSVLSDKSALRVTSSQR+ ESSVLD ++
Subjt:  LSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAESSVLDTNS

Query:  SNV
        S++
Subjt:  SNV

Arabidopsis top hits

e value

%identity

Alignment

AT5G11450.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

4.9e-53

57.64

Show/hide

Query:  PNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSIS--KPTSENGLSRRDLLLFGLTSSVALSFPSLG---------SLAEEELKAATMVDEINAYSYTYPLE
        PN   FR +  N+   K  G  K+  +  + +S    +SE GLSRRDL+L GL+S +++  P             ++ EELK  TMVD+INAYSY YPL+
Subjt:  PNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSIS--KPTSENGLSRRDLLLFGLTSSVALSFPSLG---------SLAEEELKAATMVDEINAYSYTYPLE

Query:  LSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAESSVLDTNS
          S    FKWVESRKPERYSSAAPLSPDARLRIVSERVD  DNL+IS++IGPPNS  + SK+K TW+AK+VADSVLSDKSALRVTSSQR+ ESSVLD ++
Subjt:  LSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAESSVLDTNS

Query:  SNV
        S++
Subjt:  SNV

Sequences

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CDS sequence

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mRNA sequence

Show/hide mRNA sequence

ATGGCGCTTCTCAATTCTTCTCTTTCTGTTTCTACTTCCACCAACGTTTCTCTTCCTAATCTACCTTTCTTCAGAACCCAACCCAAAAACTTGCCTTGTCGGAAAAGAAT
TGGAATGTACAAGAAATTCAATGTCTGTTCAACTTCAATCTCAAAACCCACCTCAGAAAATGGATTATCCCGGAGGGATTTGTTGCTATTTGGGCTTACTTCTTCAGTTG
CTTTGTCATTTCCATCCTTAGGTTCTCTTGCTGAGGAAGAGTTGAAAGCTGCCACAATGGTTGATGAAATAAATGCTTATTCTTATACTTATCCGCTGGAGTTGTCATCT
ACTAATTTTGCCTTTAAATGGGTGGAGTCAAGAAAACCAGAACGTTATTCGTCGGCCGCTCCATTGTCTCCTGATGCTCGATTGAGGATTGTCTCCGAGAGAGTTGATTT
CATTGACAACCTTATTATTTCGGTTACGATAGGCCCTCCAAATTCCATATTTATAAAATCAAAGGACAAGAGTACTTGGGCAGCAAAAGATGTTGCAGACTCTGTTTTAT
CCGATAAATCTGCATTGCGGGTGACTTCAAGTCAGCGAATGGCCGAGAGTTCAGTTCTTGATACAAATTCAAGTAATGTAAGTAAACTATAAAGTCCTATTGATGCATAT
ATAGAGCGTTTCTAATTGTCCTCTCACAGATTGATGGTGAGCCATATTGGTATTTTGAGTACCTTGTTCGAAAGTCACCAACAAAAATCGTATGTCTTGACCCTTTTGAA
TGCTTTGTTCCCCCTCAGTAGCGGACATTACAAATATTTGATTTCTGAGGAATCTAATGAATCCTGCAGGTCGGAGAATCCAACATTTATAGGCATTATGTTGCATCAAC
AGCAGAGCGAGATGGTAAGTTCTTAATTTTTAGTCTGCATTCTGTCAAACAAGCTATAAATGAGCAAAACCTGCTATTTTATAGCATAACTACCGTCTTGTAACCTGCAA
AGCATATTACAATTTCCTTGTTGATAACTCAGTAAGGTATATTTCTTGCACAATACTTATAACCCAAGTTTGAACTCAAGAACCGTGAAGGTATTTCTAAACATTTCAAA
CAGTTACATCAAAGCGAAGAGGTAAAAATATTGCAATTGGAAAAGAAAACAAGAAAATTGTGTTAGACCTTTGATCGGTGGTTTTATGTTAGATCATCCAAACTTCAACG
GGGGGCTGGAAAATGTGTACGAGTTATTGGTTCTGTTACGATTGATGAACAAGCTTGTTCGTTCTCCTAAATGTATGTTTTTAGTATCATGAACTGTGGGCACTAATCAT
GTTTCAATTGCAGGCTTTCTGTATACCATCAATGCTTCAACACTCGGCGCACAATGGAACACGATGGGACCTTTTCTGCAGAAAACCGTAGAGTCTTTTCGACTTCTTCC
TCCCACTGAAGACTATGTACCACCATACAAGGATCCATGGAGATTTTGGTGACATTTTGTATATCCTCATACTTCATTTCCAGGAATTTTTGTACTATATTCTTTTGTCG
TGTGGTTTTACCAATGAGTTCTAGTTCAGTTTTGAAATCTAGGCATAGTGGCGAGAAGTTATTGTGTGTAAACTTCCATGAAAAGGTGGGAGAAAGTAAGTCTCTGCCTT
GCTTATGTTCAAAATTTCTTTCAATGGTCAAACTAAATTGC

Protein sequence

Show/hide protein sequence

MALLNSSLSVSTSTNVSLPNLPFFRTQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLSRRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAYSYTYPLELSS
TNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAESSVLDTNSSNVSKL

CsGy2G022730 (gene) of Cucumber (Gy14) v2.1 genome