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CsGy2G024480 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G024480
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNBS-LRR resistance-like protein RGC547
Genome locationGy14Chr2:32247008..32248623
RNA-Seq ExpressionCsGy2G024480
SyntenyCsGy2G024480
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR044974 - Disease resistance protein, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEV76884.1 resistance protein RGA01, partial [Capsicum annuum]1.99e-1241.18Show/hide
Query:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI
        I  A+F T   +F     L + +E +  N+ H L +      LRKK   +Y KL  K +  +R C  K +LIVLDDID+I+ LE L G+   FG GSR +
Subjt:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI

Query:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR
        I TRNRQL+ N  A  ++ST  D EA+L F+   F+
Subjt:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR

AEV76885.1 resistance protein RGA02, partial [Capsicum annuum]1.99e-1241.18Show/hide
Query:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI
        I  A+F T   +F     L + +E +  N+ H L +      LRKK   +Y KL  K +  +R C  K +LIVLDDID+I+ LE L G+   FG GSR +
Subjt:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI

Query:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR
        I TRNRQL+ N  A  ++ST  D EA+L F+   F+
Subjt:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR

AEV76893.1 resistance protein RGA10, partial [Capsicum annuum]1.99e-1241.18Show/hide
Query:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI
        I  A+F T   +F     L + +E +  N+ H L +      LRKK   +Y KL  K +  +R C  K +LIVLDDID+I+ LE L G+   FG GSR +
Subjt:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI

Query:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR
        I TRNRQL+ N  A  ++ST  D EA+L F+   F+
Subjt:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR

PHT64733.1 hypothetical protein T459_29158 [Capsicum annuum]8.16e-1342.97Show/hide
Query:  FTSKFDGYPLLENERENSGKNKGHKLPD------LRKKLLYL--KLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQL
        F   FD   + E+++EN+ KN+ H L +      LRKK  Y+  KL  K +   R C  K +LIVLDDID+ + LE L G+   FG GSR +I TRNRQL
Subjt:  FTSKFDGYPLLENERENSGKNKGHKLPD------LRKKLLYL--KLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQL

Query:  LTNKVAKEQLST--DVEALLHFSSQGFR
        + N  A  ++ST  D EA+L F+   F+
Subjt:  LTNKVAKEQLST--DVEALLHFSSQGFR

XP_023927832.1 TMV resistance protein N-like [Quercus suber]4.51e-1343.51Show/hide
Query:  FDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLT
        FDG   L N RE  GK   H L  L+K+LL+  L  + I F D Q G          K +LIVLDD+D ++QLE+L GER+ FG GSR II TR++ LL 
Subjt:  FDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLT

Query:  NKVAKE-------QLSTDVEALLHFSSQGFR
        N    E       +L+ D EAL  FS + F+
Subjt:  NKVAKE-------QLSTDVEALLHFSSQGFR

TrEMBL top hitse value%identityAlignment
A0A0A0LMF1 Uncharacterized protein7.67e-6685.48Show/hide
Query:  YPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLTNKVAKEQLSTDVE
        Y   +NERENSGKNKGHKLPDL+KKLLYLKLCRKRIFKDRQCGRKGLLIVL DIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLTNKVAKEQLSTDVE
Subjt:  YPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLTNKVAKEQLSTDVE

Query:  ALLHFSSQGFRFRKNVESALKCLR
        ALLHFSSQGF  +    S L  ++
Subjt:  ALLHFSSQGFRFRKNVESALKCLR

A0A2G2Y4P2 TIR domain-containing protein3.95e-1342.97Show/hide
Query:  FTSKFDGYPLLENERENSGKNKGHKLPD------LRKKLLYL--KLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQL
        F   FD   + E+++EN+ KN+ H L +      LRKK  Y+  KL  K +   R C  K +LIVLDDID+ + LE L G+   FG GSR +I TRNRQL
Subjt:  FTSKFDGYPLLENERENSGKNKGHKLPD------LRKKLLYL--KLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQL

Query:  LTNKVAKEQLST--DVEALLHFSSQGFR
        + N  A  ++ST  D EA+L F+   F+
Subjt:  LTNKVAKEQLST--DVEALLHFSSQGFR

A5JRI9 NBS-LRR resistance-like protein RGC547 (Fragment)9.62e-1338.35Show/hide
Query:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKL---------CRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLT
        +F+ + LLEN RE S K   H L  LR+K L L L          + R   +R+   K +L+VLDD+D ++QLE L G    FG GSR II TR+  LLT
Subjt:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKL---------CRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLT

Query:  ---NKVAKEQLSTDVEALLHFSSQGFRFRKNVE
           +K+ + +L +  EA+  F+   +R  K +E
Subjt:  ---NKVAKEQLSTDVEALLHFSSQGFRFRKNVE

G9FGB1 Resistance protein RGA02 (Fragment)9.62e-1341.18Show/hide
Query:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI
        I  A+F T   +F     L + +E +  N+ H L +      LRKK   +Y KL  K +  +R C  K +LIVLDDID+I+ LE L G+   FG GSR +
Subjt:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI

Query:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR
        I TRNRQL+ N  A  ++ST  D EA+L F+   F+
Subjt:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR

G9FGB9 Resistance protein RGA10 (Fragment)9.62e-1341.18Show/hide
Query:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI
        I  A+F T   +F     L + +E +  N+ H L +      LRKK   +Y KL  K +  +R C  K +LIVLDDID+I+ LE L G+   FG GSR +
Subjt:  IISAVFFTS--KFDGYPLLENERENSGKNKGHKLPD------LRKK--LLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTI

Query:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR
        I TRNRQL+ N  A  ++ST  D EA+L F+   F+
Subjt:  IRTRNRQLLTNKVAKEQLST--DVEALLHFSSQGFR

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq13.8e-0638.89Show/hide
Query:  IFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLTNKVAKEQLSTDV----EALLHFSSQGFRFRKNVESALK
        I K R C +K +L+VLDD+++ +QL+ LVG    FG GSR +I TR+ +LL N    E     V    EA+  F+   F+ R + E   K
Subjt:  IFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLTNKVAKEQLSTDV----EALLHFSSQGFRFRKNVESALK

F4I594 Disease resistance protein RML1A9.4e-0542.11Show/hide
Query:  KLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        ++C     K+R C  K + I+LDD++ ++QLE L  E   FG GSR I+ T N++LL
Subjt:  KLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

F4JT78 Disease resistance protein RPP2A2.7e-0452.38Show/hide
Query:  KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        K +LI+LDD+D +E L+ LVG+   FG GSR ++ T++RQLL
Subjt:  KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

F4JT80 Disease resistance protein RPP2B1.9e-0539.18Show/hide
Query:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGR-------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        +FDGY  LE+  +NS   K + LP L +KLL+ KL        R  GR       K L IVLD++   +Q+E L+G++  +  GSR +I TR+++LL
Subjt:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGR-------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

V9M2S5 Disease resistance protein RPV13.6e-0448.15Show/hide
Query:  RKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        R  + KD    R+ + IVLDD+D + QLE L+G R   G GSR II TRN+ +L
Subjt:  RKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

Arabidopsis top hitse value%identityAlignment
AT1G63870.1 Disease resistance protein (TIR-NBS-LRR class) family7.9e-0737.93Show/hide
Query:  LKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        +++C   + ++R C ++ +LI+LDD+++I QLE L  E   FG GSR ++ T N+++L
Subjt:  LKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

AT4G19510.1 Disease resistance protein (TIR-NBS-LRR class)1.3e-0639.18Show/hide
Query:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGR-------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        +FDGY  LE+  +NS   K + LP L +KLL+ KL        R  GR       K L IVLD++   +Q+E L+G++  +  GSR +I TR+++LL
Subjt:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGR-------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

AT4G19510.2 Disease resistance protein (TIR-NBS-LRR class)1.3e-0639.18Show/hide
Query:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGR-------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        +FDGY  LE+  +NS   K + LP L +KLL+ KL        R  GR       K L IVLD++   +Q+E L+G++  +  GSR +I TR+++LL
Subjt:  KFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGR-------KGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family1.8e-0637.69Show/hide
Query:  FTSKFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRI-FK------DRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        F+  F+G   LEN RE S K +G     L+ +LL   L R  I FK        +   K +L+V+DD+D + QL +   +R  FG GSR II TRN  LL
Subjt:  FTSKFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRI-FK------DRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

Query:  TNKVAK-----EQLSTDVEALLHFSSQGFR
            A+     ++L  D E+L  FS   FR
Subjt:  TNKVAK-----EQLSTDVEALLHFSSQGFR

AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family1.8e-0637.69Show/hide
Query:  FTSKFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRI-FK------DRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL
        F+  F+G   LEN RE S K +G     L+ +LL   L R  I FK        +   K +L+V+DD+D + QL +   +R  FG GSR II TRN  LL
Subjt:  FTSKFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRI-FK------DRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLL

Query:  TNKVAK-----EQLSTDVEALLHFSSQGFR
            A+     ++L  D E+L  FS   FR
Subjt:  TNKVAK-----EQLSTDVEALLHFSSQGFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAAATTATTAGTGCTGTTTTCTTTACAAGTAAATTTGATGGTTATCCCCTTCTTGAGAACGAAAGAGAAAATTCTGGTAAAAATAAAGGACATAAACTACCAGA
TTTACGAAAGAAGCTTCTATATCTCAAGTTATGCAGGAAGAGAATCTTCAAAGATAGGCAATGTGGAAGGAAGGGGTTGCTTATTGTTCTTGATGATATTGATTACATAG
AACAATTAGAGAATTTAGTAGGAGAACGCATTCAGTTCGGAGTAGGAAGTAGAACCATCATAAGGACTAGAAATAGACAACTTCTTACTAATAAGGTGGCAAAAGAGCAA
TTGAGTACTGATGTGGAAGCTTTGCTTCACTTTAGCTCTCAAGGTTTTAGGTTCCGAAAAAACGTGGAAAGTGCATTAAAATGTTTGAGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
CTTCCCCTTCTTCGGTTGGTAGATCTTTGATTTTCTTTAGTTCATCCTTTGTCTTGAGATCACATCCTTGTTAAGTGGGATTCATACATAATGACATTGAAGTAATTTTG
TTAGCCATCTTCAGGCTGCATTCAAACGCAAAGGAATCACAACTTCCTTTTTCTCCTGCTCTTCTTCAAGCTATACAACGATCTTCTGTTTACGTCCTCGTTTTCTCTAA
GAACTATTCACCTTCGAAATGGCGTTTGGAAGATTGTTGGATGTAAAAACATGAATAGTGACCGGATGTTCGTCTTGCCGCTTTTCTACCATGTAGATCCATCAGATGTC
CGAAAGCACAGAAAATCAAAAAACTCTCCAACAAGATGAATTCCAAAGATGGAGGGACGATCTCACAGAAATTGCTAATTCATCTGGTGTGGTTTCCACACAGACTGGTC
AAAATCATCATCATCATCACCGTTATTATTACTTTGAGAAGGTAGGTCAAATCATTTAATTATGTTTTTACTTCTTACAGTATATTGTATTTTGATGTTTGGTTTCAAGT
TTTTGGAAGTGTTTGATTTAGTTAAAAATGTTTAAAATTATTAGTGCTGTTTTCTTTACAAGTAAATTTGATGGTTATCCCCTTCTTGAGAACGAAAGAGAAAATTCTGG
TAAAAATAAAGGACATAAACTACCAGATTTACGAAAGAAGCTTCTATATCTCAAGTTATGCAGGAAGAGAATCTTCAAAGATAGGCAATGTGGAAGGAAGGGGTTGCTTA
TTGTTCTTGATGATATTGATTACATAGAACAATTAGAGAATTTAGTAGGAGAACGCATTCAGTTCGGAGTAGGAAGTAGAACCATCATAAGGACTAGAAATAGACAACTT
CTTACTAATAAGGTGGCAAAAGAGCAATTGAGTACTGATGTGGAAGCTTTGCTTCACTTTAGCTCTCAAGGTTTTAGGTTCCGAAAAAACGTGGAAAGTGCATTAAAATG
TTTGAGAGAGTAGTAAAACTAAGCTTTGAAGAACTAAATTCGCATGAGAAGGACATATATAGAATGTTTCTTTTAAGGGAGAGAATGCTAAATATGCTACCTCAATATGG
AATGCTTGTGGCAGTGTCAAGCATGGTGCCATTTCTGTACTCAGCATCATCAAGTGTCTCATATTTCTTAGAAGCAATTTTGAACTCTGGATGCATGCCTTCATTCAAGA
GATCTGAAAAGCACATGTTTCAGAAATACTGTAAGTCTTTCTTAATTAATTTAATGCATATAACAAAATAAATTGCTGTTATTAAAGTGGCAAATTTAAAAATTCATTAG
AAAATCGTCTATGGATCGAAAACGAAAAGGTGAAACTATCTCTTTTTTCAAAATATCTGCGTGTAATCGTTCCCTTAATTTTTAGGTTTTCATTCTCTCTTAAACATCTT
TCACTCTTTCTTCAACTTCAATCTTTAAGATTGAAGTACTATATATGTCTTAAACATGAACT
Protein sequenceShow/hide protein sequence
MFKIISAVFFTSKFDGYPLLENERENSGKNKGHKLPDLRKKLLYLKLCRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFGVGSRTIIRTRNRQLLTNKVAKEQ
LSTDVEALLHFSSQGFRFRKNVESALKCLRE