CuGenDBv2

Gene ID	CsGy2G024980
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	lisH domain and HEAT repeat-containing protein KIAA1468 homolog
Genome location	Gy14Chr2:32597956..32598516
RNA-Seq Expression	CsGy2G024980
Synteny	CsGy2G024980
Gene Ontology terms	GO:0032367 - intracellular cholesterol transport (biological process) GO:0005802 - trans-Golgi network (cellular component)
InterPro domains	IPR040362 - RAB11-binding protein RELCH

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031914.1 lisH domain and HEAT repeat-containing protein KIAA1468-like protein [Cucumis melo var. makuwa]

1.06e-83

94.63

Show/hide

Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD+DALDPAH+EALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGG +LGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP PSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQ++SQ+L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

KAG7015929.1 hypothetical protein SDJN02_21033, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.68e-83

86.58

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRR ERADAFCEAIRALDATDLS TSIRELFLP+IQNLL+D+DALDPAH+EALEIIMKERSGGTFETI KVMGAHLGIASSV++FFG DGG LLGKKE+L
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP+PSEPVEPPNP  PPPAEDTRFRRIMRG FTDMLRGKVKSQ++S +L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

TYK06694.1 lisH domain and HEAT repeat-containing protein KIAA1468-like protein [Cucumis melo var. makuwa]

1.24e-83

94.63

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD+DALDPAH+EALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGG +LGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP PSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQ++SQ+L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

XP_008441265.1 PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog [Cucumis melo]

1.26e-83

94.63

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD+DALDPAH+EALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGG +LGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP PSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQ++SQ+L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

XP_011649929.1 RAB11-binding protein RELCH homolog [Cucumis sativus]

2.98e-89

100

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMV5 Uncharacterized protein

1.44e-89

100

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

A0A1S3B2K8 lisH domain and HEAT repeat-containing protein KIAA1468 homolog

6.09e-84

94.63

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD+DALDPAH+EALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGG +LGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP PSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQ++SQ+L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

A0A5A7SL60 LisH domain and HEAT repeat-containing protein KIAA1468-like protein

5.12e-84

94.63

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD+DALDPAH+EALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGG +LGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP PSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQ++SQ+L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

A0A5D3C5Y5 LisH domain and HEAT repeat-containing protein KIAA1468-like protein

6.00e-84

94.63

Show/hide

Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD+DALDPAH+EALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGG +LGKKESL
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP PSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQ++SQ+L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

A0A6J1FEL5 lisH domain and HEAT repeat-containing protein KIAA1468-like

1.30e-74

86.58

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Query:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL
        MRR ERADAFCEAIRALDATDLS TSIRELFLP+IQNLL+D+DALDPAH+EALEIIMKERSGGTFETI KVMGAHLGIASSV++FFG DGG LLGKKE+L
Subjt:  MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESL

Query:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL
        EP+PSEPVEPPNP  PPPAEDTRFRRIMRG FTDMLRGKVKSQ++S +L
Subjt:  EPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16210.1 HEAT repeat-containing protein

5.1e-49

69.74

Show/hide

Query:  RRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESLE
        RR ERA+AFCEAIRALDATDLS TS++E  LP IQNLL+D DALDPAH+EALEIIMKERSGGTFE ISK MGAHLGIASSVT+ FG   GGLLGKKE+ E
Subjt:  RRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESLE

Query:  PTPSEPVEPPNPTPPPP------AEDTRFRRIMRGSFTDMLRGKVKSQEESQ
         T   P  P    P  P      +EDTRFRRIMRG+FT+MLR K K+Q+E+Q
Subjt:  PTPSEPVEPPNPTPPPP------AEDTRFRRIMRGSFTDMLRGKVKSQEESQ

Sequences

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CDS sequence

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ATGCGTCGCCATGAGAGAGCTGATGCATTTTGTGAGGCGATCCGTGCATTGGATGCTACAGACCTATCGCCAACCAGCATACGAGAGTTGTTCCTTCCTACCATACAAAA
CCTTTTAAGGGATATAGATGCTCTAGATCCAGCACACAGGGAAGCTCTTGAAATCATAATGAAGGAGAGATCAGGAGGAACATTTGAAACCATCAGTAAGGTGATGGGTG
CACATCTCGGAATTGCATCGTCGGTTACCAATTTCTTTGGTGTTGATGGTGGTGGGCTATTGGGAAAGAAAGAAAGTTTGGAGCCAACTCCAAGCGAACCAGTTGAGCCA
CCAAATCCTACACCGCCGCCGCCAGCTGAGGACACTAGGTTCAGACGAATCATGAGAGGAAGTTTCACCGACATGCTCCGTGGCAAAGTAAAAAGTCAGGAGGAGTCTCA
GACTCTATGA

mRNA sequence

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Protein sequence

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MRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGGLLGKKESLEPTPSEPVEP
PNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEESQTL

CsGy2G024980 (gene) of Cucumber (Gy14) v2.1 genome