; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G025250 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G025250
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description50S ribosomal protein L27, chloroplastic
Genome locationGy14Chr2:32749458..32750611
RNA-Seq ExpressionCsGy2G025250
SyntenyCsGy2G025250
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001684 - Ribosomal protein L27
IPR018261 - Ribosomal protein L27, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138618.1 50S ribosomal protein L27, chloroplastic [Cucumis sativus]1.48e-82100Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
        MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL

Query:  GKDHTIFSLIDGLVKFEKYGPDKKKV
        GKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GKDHTIFSLIDGLVKFEKYGPDKKKV

XP_008441337.1 PREDICTED: 50S ribosomal protein L27, chloroplastic [Cucumis melo]1.92e-7894.44Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
        MTLNL++SF+GLSLASSSSFFKGDFGSIHT P LS+SFPN FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL

Query:  GKDHTIFSLIDGLVKFEKYGPDKKKV
        GKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GKDHTIFSLIDGLVKFEKYGPDKKKV

XP_022993762.1 50S ribosomal protein L27, chloroplastic [Cucurbita maxima]1.08e-7390.62Show/hide
Query:  MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV
        M+LNL+ +F+GLSLASSSS  FFKGDFGSI   PKLSVSFPN FPLTIENAHKKGAGSTKNGRDSKGQRLGVKI+GDQVAKPGSIIVRQRGTKFHAGKNV
Subjt:  MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV

Query:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV
        GLGKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV

XP_023550670.1 50S ribosomal protein L27, chloroplastic [Cucurbita pepo subsp. pepo]1.08e-7390.62Show/hide
Query:  MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV
        M+LNL+ +F+GLSLASSSS  FFKGDFGSI   PKLSVSFPN FPLTIENAHKKGAGSTKNGRDSKGQRLGVKI+GDQVAKPGSIIVRQRGTKFHAGKNV
Subjt:  MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV

Query:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV
        GLGKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV

XP_038884234.1 50S ribosomal protein L27, chloroplastic [Benincasa hispida]1.83e-7692.86Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
        M+LNL+++FKGLSL SSSSFFKGDFGSI T PKLS SFPN FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL

Query:  GKDHTIFSLIDGLVKFEKYGPDKKKV
        GKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GKDHTIFSLIDGLVKFEKYGPDKKKV

TrEMBL top hitse value%identityAlignment
A0A0A0LQ66 Uncharacterized protein7.15e-83100Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
        MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL

Query:  GKDHTIFSLIDGLVKFEKYGPDKKKV
        GKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GKDHTIFSLIDGLVKFEKYGPDKKKV

A0A1S3B381 50S ribosomal protein L27, chloroplastic9.28e-7994.44Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
        MTLNL++SF+GLSLASSSSFFKGDFGSIHT P LS+SFPN FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGL

Query:  GKDHTIFSLIDGLVKFEKYGPDKKKV
        GKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GKDHTIFSLIDGLVKFEKYGPDKKKV

A0A6J1E4G2 50S ribosomal protein L27, chloroplastic-like7.15e-7389.84Show/hide
Query:  MTLNLLSSFKGLSL--ASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV
        MTLNL+ +F+GLSL  +SSSSFFKGDFGSI   P LSVSFPN FPLTIE+AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV
Subjt:  MTLNLLSSFKGLSL--ASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV

Query:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV
        GLGKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV

A0A6J1FG23 50S ribosomal protein L27, chloroplastic4.27e-7389.84Show/hide
Query:  MTLNLLSSFKGLSLA--SSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV
        M+LNL+ +F+GLSLA  SSSSFFKGDFGSI   PKLSVSFP  FPLTIENAHKKGAGSTKNGRDSKGQRLGVKI+GDQVAKPGSIIVRQRGTKFHAGKNV
Subjt:  MTLNLLSSFKGLSLA--SSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV

Query:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV
        GLGKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV

A0A6J1K388 50S ribosomal protein L27, chloroplastic5.21e-7490.62Show/hide
Query:  MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV
        M+LNL+ +F+GLSLASSSS  FFKGDFGSI   PKLSVSFPN FPLTIENAHKKGAGSTKNGRDSKGQRLGVKI+GDQVAKPGSIIVRQRGTKFHAGKNV
Subjt:  MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNV

Query:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV
        GLGKDHTIFSLIDGLVKFEKYGPDKKKV
Subjt:  GLGKDHTIFSLIDGLVKFEKYGPDKKKV

SwissProt top hitse value%identityAlignment
A6Q4D3 50S ribosomal protein L271.1e-2670.51Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKV
        AHKKG GST+N RDS G+RLGVK FG +  + G+II+RQRGTK H G NVGLGKDHTIF+LIDG+VKFE+YG D++KV
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKV

O65037 50S ribosomal protein L27, chloroplastic8.6e-4062.96Show/hide
Query:  MTLNLLSSFKGLSL------ASSSSFFKGDFGSIHTSPKLSVSFPNIFP---LTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTK
        M   L+ +FKG+SL      +SS+SF + D  S+     + +  P   P   LTI+ AHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPG+II+RQRGT+
Subjt:  MTLNLLSSFKGLSL------ASSSSFFKGDFGSIHTSPKLSVSFPNIFP---LTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTK

Query:  FHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKV
         + G NVG+GKDHT+FSLIDGLVKFEKYGPDKKKV
Subjt:  FHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKV

P30155 50S ribosomal protein L27, chloroplastic5.7e-5281.1Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFG-SIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVG
        ++ +L+ +FKGLSLASSSSF KGDFG +   +PK SVSFP   PLTIE+AHKKGAGSTKNGRDS GQRLGVKIFGDQVAKPGSIIVRQRGTKFH GKNVG
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFG-SIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVG

Query:  LGKDHTIFSLIDGLVKFEKYGPDKKKV
        LGKDHTIFSLIDGLVKFEK+GPD+KK+
Subjt:  LGKDHTIFSLIDGLVKFEKYGPDKKKV

P82190 50S ribosomal protein L27, chloroplastic2.3e-4876.74Show/hide
Query:  MTLNLLSSFKGLSL--ASSSSFFKGDFG-SIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKN
        M+ NL++SF+G+SL  +SSSSFFKG+FG S    P  S    + FPLTIE+AHKKGAGSTKNGRDSKGQRLGVKI+GDQVAKPG+II+RQRGTKFH GKN
Subjt:  MTLNLLSSFKGLSL--ASSSSFFKGDFG-SIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKN

Query:  VGLGKDHTIFSLIDGLVKFEKYGPDKKKV
        VG+GKDHTIF+LIDGLVKFEKYGPDKKKV
Subjt:  VGLGKDHTIFSLIDGLVKFEKYGPDKKKV

Q9FLN4 50S ribosomal protein L27, chloroplastic2.5e-4773.85Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFG-SIHTSPKLSVSFPNI---FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGK
        M+LNL+ +FKGLSL+S+SSF +GD   S  TS  +++   N+    PLTIE+AHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPG+IIVRQRGTKFHAGK
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFG-SIHTSPKLSVSFPNI---FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGK

Query:  NVGLGKDHTIFSLIDGLVKFEKYGPDKKKV
        NVG+GKDHTIFSLIDGLVKFEK+GPD+KK+
Subjt:  NVGLGKDHTIFSLIDGLVKFEKYGPDKKKV

Arabidopsis top hitse value%identityAlignment
AT2G16930.1 Ribosomal protein L27 family protein7.7e-2065.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK FG +   PG+IIVRQRGT+FH G  VG+GKDHT+F+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK

AT2G16930.2 Ribosomal protein L27 family protein7.7e-2065.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK FG +   PG+IIVRQRGT+FH G  VG+GKDHT+F+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK

AT2G16930.3 Ribosomal protein L27 family protein7.7e-2065.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK FG +   PG+IIVRQRGT+FH G  VG+GKDHT+F+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK

AT5G15220.1 Ribosomal protein L27 family protein7.7e-2065.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK FG +   PG+IIVRQRGT+FH G  VG+GKDHT+F+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEK

AT5G40950.1 ribosomal protein large subunit 271.8e-4873.85Show/hide
Query:  MTLNLLSSFKGLSLASSSSFFKGDFG-SIHTSPKLSVSFPNI---FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGK
        M+LNL+ +FKGLSL+S+SSF +GD   S  TS  +++   N+    PLTIE+AHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPG+IIVRQRGTKFHAGK
Subjt:  MTLNLLSSFKGLSLASSSSFFKGDFG-SIHTSPKLSVSFPNI---FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGK

Query:  NVGLGKDHTIFSLIDGLVKFEKYGPDKKKV
        NVG+GKDHTIFSLIDGLVKFEK+GPD+KK+
Subjt:  NVGLGKDHTIFSLIDGLVKFEKYGPDKKKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTAAACCTACTTTCTTCATTCAAAGGTCTCTCTCTCGCCTCCTCTTCCTCCTTCTTCAAAGGCGATTTCGGCTCCATTCATACCTCTCCTAAGCTCTCCGTTTC
CTTCCCTAACATATTTCCTTTAACCATTGAAAACGCCCACAAGAAAGGAGCTGGTAGCACCAAGAACGGTCGTGATTCCAAGGGCCAGAGGCTCGGCGTTAAAATCTTCG
GTGATCAAGTTGCCAAACCTGGTTCCATTATTGTTCGTCAGCGTGGGACTAAGTTCCATGCCGGAAAAAATGTAGGGCTTGGCAAGGACCATACAATTTTCTCATTGATT
GATGGACTTGTAAAGTTCGAGAAGTATGGACCTGACAAGAAGAAGGTTTTCGCTTCGAATCTGAACCTTTCAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTAAACCTACTTTCTTCATTCAAAGGTCTCTCTCTCGCCTCCTCTTCCTCCTTCTTCAAAGGCGATTTCGGCTCCATTCATACCTCTCCTAAGCTCTCCGTTTC
CTTCCCTAACATATTTCCTTTAACCATTGAAAACGCCCACAAGAAAGGAGCTGGTAGCACCAAGAACGGTCGTGATTCCAAGGGCCAGAGGCTCGGCGTTAAAATCTTCG
GTGATCAAGTTGCCAAACCTGGTTCCATTATTGTTCGTCAGCGTGGGACTAAGTTCCATGCCGGAAAAAATGTAGGGCTTGGCAAGGACCATACAATTTTCTCATTGATT
GATGGACTTGTAAAGTTCGAGAAGTATGGACCTGACAAGAAGAAGGTTTTCGCTTCGAATCTGAACCTTTCAGTATGA
Protein sequenceShow/hide protein sequence
MTLNLLSSFKGLSLASSSSFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLI
DGLVKFEKYGPDKKKVFASNLNLSV