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CsGy2G025480 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G025480
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationGy14Chr2:32932250..32932723
RNA-Seq ExpressionCsGy2G025480
SyntenyCsGy2G025480
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652269.1 hypothetical protein Csa_021983 [Cucumis sativus]2.07e-56100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

KGN63196.1 hypothetical protein Csa_022217 [Cucumis sativus]6.93e-5597.83Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

XP_011649974.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]9.53e-56100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

XP_011649976.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]8.42e-56100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

XP_011649977.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]7.84e-55100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein3.80e-55100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

A0A0A0LN06 Uncharacterized protein1.00e-56100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

A0A0A0LT36 Uncharacterized protein3.36e-5597.83Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

A0A1S4E0X5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X39.27e-5395.6Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.05e-5295.6Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial3.8e-0743.18Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKASSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        GARS  R  + S+R AAA  G     + S+P  FR    +       R   E+SFC+ES++P+HS ++SALMTS LSIS  + GWL +
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKASSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein3.4e-1142.7Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.2 unknown protein3.4e-1142.7Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.3 unknown protein3.4e-1142.7Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.4 unknown protein2.2e-1043.02Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL

AT1G28395.5 unknown protein2.2e-1043.02Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGCTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGGCCTCATCATCCTCTCCCTTTCG
CATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCGCGCCACAGCTGTGGTTGGCTCCCCGAAGGTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGCTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGGCCTCATCATCCTCTCCCTTTCG
CATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCGCGCCACAGCTGTGGTTGGCTCCCCGAAGGTGCATAA
Protein sequenceShow/hide protein sequence
MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA