; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G025490 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G025490
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationGy14Chr2:32930215..32941208
RNA-Seq ExpressionCsGy2G025490
SyntenyCsGy2G025490
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652269.1 hypothetical protein Csa_021983 [Cucumis sativus]1.15e-5396.74Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG+
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS

KGN63196.1 hypothetical protein Csa_022217 [Cucumis sativus]4.17e-5698.91Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG+
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS

XP_011649972.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]6.71e-56100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

XP_011649973.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]5.52e-55100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

XP_011649976.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]1.64e-5397.8Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein7.38e-5397.78Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

A0A0A0LN06 Uncharacterized protein5.58e-5496.74Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG+
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS

A0A0A0LT36 Uncharacterized protein2.02e-5698.91Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG+
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS

A0A1S4E0X5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X31.87e-5295.6Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS +SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X12.12e-5295.6Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS +SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial2.3e-0743.18Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKPSPSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        GARS  R  + S+R AAA  G     + S+P  FR    +       R   E+SFC+ES++P+HS ++SALMTS LSIS  + GWL +
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKPSPSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.8e-1346.07Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.2 unknown protein2.8e-1346.07Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.3 unknown protein2.8e-1346.07Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.4 unknown protein1.8e-1246.51Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL

AT1G28395.5 unknown protein1.8e-1246.51Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCATCCTCTCCCTTTCG
TATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCACGCCACAGCTGTGGTTGGCTCCCCGAAGGTAGCTAG
mRNA sequenceShow/hide mRNA sequence
AAAACCCCCTTAGACCCAAAGCAGGGTTTTAGCTCTAGCCCTCACTCAGCAGCCAGCCAAGAAGCAAGAGTTAGTTCTCTCTTGTTCATATTCCGAAGCCAAGACGAACA
ACCTTCAGAATCTATCATTTCTTCTCATAATCAATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTC
TCAACCCAAGCCCTCACCATCCTCTCCCTTTCGTATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGA
TGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCACGCCACAGCTGTGGTTGGCTCCCCGAAGGTAGCTAGCACAATTTATAGGCCCAT
TGATGTTCTTCTTGCCTTCTTGTTGCTCTGCATGCAATGACGATCTATGATAAATTACCAAGAGGATCTATACGGGCAGTGACTTCTATTAAGTAGAAGCTTCCATGCTC
CAAATGGTGGTTTGTGAAGAAGAGCTTCCGATCAATGGCAATGGATTATTGTTATTTGAAGACTGATTTAATTTTAATTTTTTAGTATTTATTCTCTATTTCG
Protein sequenceShow/hide protein sequence
MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGS