; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G026770 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G026770
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionbinding partner of ACD11 1-like
Genome locationGy14Chr2:34317216..34328251
RNA-Seq ExpressionCsGy2G026770
SyntenyCsGy2G026770
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.87e-290100Show/hide
Query:  MKLPLEYSCSHQCAGDQRALEGRRCTILEHRCTTKISPNGTALSNLPRKKIESWRKEKGKIESSLQIRSKKTSCMLLFADNATRLTAFSKHFMGILKASD
        MKLPLEYSCSHQCAGDQRALEGRRCTILEHRCTTKISPNGTALSNLPRKKIESWRKEKGKIESSLQIRSKKTSCMLLFADNATRLTAFSKHFMGILKASD
Subjt:  MKLPLEYSCSHQCAGDQRALEGRRCTILEHRCTTKISPNGTALSNLPRKKIESWRKEKGKIESSLQIRSKKTSCMLLFADNATRLTAFSKHFMGILKASD

Query:  YSVKVRIEFNEESQVFTFHLPRIVFHQQFIKLKMRPPSDKVQTSDDLQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDP
        YSVKVRIEFNEESQVFTFHLPRIVFHQQFIKLKMRPPSDKVQTSDDLQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDP
Subjt:  YSVKVRIEFNEESQVFTFHLPRIVFHQQFIKLKMRPPSDKVQTSDDLQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDP

Query:  KALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEK
        KALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEK
Subjt:  KALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEK

Query:  HQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        HQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
Subjt:  HQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Query:  FHLAMSNLISKEPPVVA
        FHLAMSNLISKEPPVVA
Subjt:  FHLAMSNLISKEPPVVA

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]3.89e-17899.63Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]1.83e-17698.89Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRVADNAACLT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

XP_022950330.1 binding partner of ACD11 1 [Cucurbita moschata]1.04e-16191.14Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK  PV A
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]4.04e-16694.46Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+ AENHVPRREMQEVRV DNAACLT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ LHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE  VVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein1.88e-17899.63Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

A0A1S3CIA3 binding partner of ACD11 1-like8.88e-17798.89Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRVADNAACLT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

A0A5D3BPG7 Binding partner of ACD11 1-like8.88e-17798.89Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRVADNAACLT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

A0A6J1GFF4 binding partner of ACD11 15.02e-16291.14Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK  PV A
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

A0A6J1IKN1 binding partner of ACD11 15.02e-16291.14Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        +QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK  PV A
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA

SwissProt top hitse value%identityAlignment
P87216 Protein vip16.6e-0622.27Show/hide
Query:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSP
        V V ++S   TE++I +FFSF G++ +I  + + GE++TA + F  P A + ALLL  A +    + IT                +++    + T+    
Subjt:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSP

Query:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF
          + +A Q    +        +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     F
Subjt:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF

Query:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLI
        A   KLN T S V T  +     A           AG +AG K +  +    + L+
Subjt:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLI

Q9LFD5 Binding partner of ACD11 12.5e-4542.13Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        + SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                 
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-5145.63Show/hide
Query:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS
        TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   +K A+VTF D +  E A+LLSGATIVD  V ++ A ++                 L+P    S
Subjt:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
           +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKHQLT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQK  VS+KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV   A W+ GAF KVAKA +  G K +EK  +A
Subjt:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 11.8e-4642.13Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        + SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                 
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 11.3e-4642.52Show/hide
Query:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT
        + SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                 
Subjt:  LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein1.4e-9973.58Show/hide
Query:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTEN
        TR+VQV +VSDLATEREIHEFFSFSG+IEHIEIQ E G+S+ AFVTFTDPKALEIALLLSGATIVD+IV+IT AEN+V RRE QEVR+ DNA  L   E+
Subjt:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTEN

Query:  NSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA
         +   +   +   + + YV++AQ+VVATVLAKGSA+GQDA+NKAKAFDEKHQL A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQKL VSDKTMA
Subjt:  NSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPV
        AIFAAERKLNDTGSAVK+S+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN+ SK+ P+
Subjt:  AIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-5044.44Show/hide
Query:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS
        TV+V +VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF D +  E A+LL+G+TIVD  V++T +    P  ++    +A   +     +++S
Subjt:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
        P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKHQLT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQK  V++KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV   A W+ GAF +V+KA +  G K +EK  LA
Subjt:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGCCCCTGGAGTACAGCTGCTCTCACCAGTGTGCTGGAGATCAGAGAGCCCTTGAAGGGCGCCGTTGCACAATCTTGGAGCACCGCTGCACTACGAAAATTTC
ACCCAACGGCACTGCGCTATCTAACTTGCCGAGAAAAAAGATAGAAAGTTGGAGGAAGGAAAAAGGAAAAATAGAATCGAGTCTTCAAATTAGAAGCAAGAAGACTTCTT
GCATGCTCCTCTTTGCTGACAATGCAACAAGGTTGACGGCGTTTTCAAAGCATTTCATGGGGATTTTGAAAGCTTCAGACTACAGTGTCAAAGTTCGCATAGAGTTTAAT
GAAGAAAGTCAGGTTTTCACGTTTCATCTTCCTCGAATCGTCTTCCACCAACAGTTTATCAAACTTAAGATGAGACCACCTTCAGATAAAGTCCAAACTTCAGACGATCT
TCAGTCTCAGACTAGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTC
AATGTGAACAAGGGGAATCCAAGACTGCGTTTGTTACATTTACAGATCCTAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTGGATAAGATCGTGAGC
ATAACTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGCAGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTCTCCTAGCATTGAGGA
TTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTCGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGG
CAAAAGCATTTGACGAAAAACATCAGTTAACAGCCAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTTACAGAGAAATTAACAGTTGGGATATCAGTG
GTTAACGAGAAAGTCAAGTCTGTGGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGCTCTGCTGTCAA
AACAAGCAAGTATGTGACAGCAAGTGCTGCATGGCTAAATGGCGCTTTTGGCAAGGTCGCTAAAGCAGGGCAAGCAGCAGGTACAAAAACCAGAGAAAAGTTCCATTTGG
CTATGTCAAACTTAATTTCAAAGGAACCCCCAGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGCCCCTGGAGTACAGCTGCTCTCACCAGTGTGCTGGAGATCAGAGAGCCCTTGAAGGGCGCCGTTGCACAATCTTGGAGCACCGCTGCACTACGAAAATTTC
ACCCAACGGCACTGCGCTATCTAACTTGCCGAGAAAAAAGATAGAAAGTTGGAGGAAGGAAAAAGGAAAAATAGAATCGAGTCTTCAAATTAGAAGCAAGAAGACTTCTT
GCATGCTCCTCTTTGCTGACAATGCAACAAGGTTGACGGCGTTTTCAAAGCATTTCATGGGGATTTTGAAAGCTTCAGACTACAGTGTCAAAGTTCGCATAGAGTTTAAT
GAAGAAAGTCAGGTTTTCACGTTTCATCTTCCTCGAATCGTCTTCCACCAACAGTTTATCAAACTTAAGATGAGACCACCTTCAGATAAAGTCCAAACTTCAGACGATCT
TCAGTCTCAGACTAGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTC
AATGTGAACAAGGGGAATCCAAGACTGCGTTTGTTACATTTACAGATCCTAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTGGATAAGATCGTGAGC
ATAACTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGCAGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTCTCCTAGCATTGAGGA
TTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTCGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGG
CAAAAGCATTTGACGAAAAACATCAGTTAACAGCCAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTTACAGAGAAATTAACAGTTGGGATATCAGTG
GTTAACGAGAAAGTCAAGTCTGTGGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGCTCTGCTGTCAA
AACAAGCAAGTATGTGACAGCAAGTGCTGCATGGCTAAATGGCGCTTTTGGCAAGGTCGCTAAAGCAGGGCAAGCAGCAGGTACAAAAACCAGAGAAAAGTTCCATTTGG
CTATGTCAAACTTAATTTCAAAGGAACCCCCAGTTGTTGCCTAA
Protein sequenceShow/hide protein sequence
MKLPLEYSCSHQCAGDQRALEGRRCTILEHRCTTKISPNGTALSNLPRKKIESWRKEKGKIESSLQIRSKKTSCMLLFADNATRLTAFSKHFMGILKASDYSVKVRIEFN
EESQVFTFHLPRIVFHQQFIKLKMRPPSDKVQTSDDLQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVS
ITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISV
VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA