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CsGy2G026860 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G026860
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationGy14Chr2:34418169..34422656
RNA-Seq ExpressionCsGy2G026860
SyntenyCsGy2G026860
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151845.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis sativus]1.21e-69100Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_008462784.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis melo]2.35e-6797.09Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]3.10e-6391.26Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]7.61e-6492.23Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]1.31e-6493.2Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS RNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein5.86e-70100Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.14e-6797.09Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.50e-6389.32Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MAS+LFK ++ESSS  PSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.50e-6391.26Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial2.13e-6391.26Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS  PSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

SwissProt top hitse value%identityAlignment
P23934 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.9e-0738.46Show/hide
Query:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH
        ++ ++   ++LI E P  +V  R+++C+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH

P52504 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial4.3e-0740Show/hide
Query:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH
        ++ ++   ++LI + P  +V  RI+AC+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH

Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial3.6e-3869.37Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+EVPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQGHHH
        CGLRY Q HHH
Subjt:  CGLRYTQGHHH

Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related2.6e-3969.37Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+EVPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQGHHH
        CGLRY Q HHH
Subjt:  CGLRYTQGHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGTCTGTTCAAAGTGCTTCTTGAATCTTCTTCTAACATCCCATCTTCTACGAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGCAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GACATCCAATCGAGTTCATATGCCTTGATCGGGAAGAGCCTGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGGCCATCACCACTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAGAAAAGTTATATTCGTGGTTTTTACTCTAACCTTTCCCCGGCCATAGCTCTTCGCGCTCTCTCTCTCTCTCTCTCTCTCAGCTCAGGTTGTGCGCATCGACGGAT
CAATGGCGTCGAGTCTGTTCAAAGTGCTTCTTGAATCTTCTTCTAACATCCCATCTTCTACGAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAA
TGGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGCAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCT
TGGACATCCAATCGAGTTCATATGCCTTGATCGGGAAGAGCCTGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGGCCATCACCACTAGAAAATGTGCAAATGAT
TATTCCAGCAAGCAACCCAGAACTTGGAAAGACTATCCTACCTCTCTAAACTCAGACTTCTGTAATGGTTTATACTATTGGCTGCATAAATTAGGAATTTAAGAATTCCA
TTCACTGAGCACTTCGGCCGGTCCATTGTCGTTTGCCAAATTTGTTCTATTGCACTGTCTAGTGAACATATCTTGTTGAGTCTAATACCCAATAAAAGGTTTTAGATCTC
TTGGGAGTTGCAAGCTTGAAATTGGACTTTTTATAAGATCACCATTTTTAAGGGCACAAATGTTCATTTGGCTCAGTGGTGTTTGAAATCAAATGAAATTTGTTCTTTCG
TACGTAAATCTTGTTTCTTCCTCATTTTGATCTTTTTCCTCATCAAACTTGCAATTTATTTTCCTTCACTTGGACTCCTCCTCTGGTTTCTTCTATGTGCTCCTTGGTCT
CGCTCTCTCTTCATCCTTAGGTGAGAGGTTGCAGAACGAAAAAGGATGAAAAGGATTTAAAAACACAAATAAGGAAAAGAAGAGTTAGCAATGAAATGGAAAAGGAAAAA
AACTAGACTTTTAGAATTGGGTCATTTTAGTAATTTCGTCCTATACTAACTTGAGGACCTTATTTGCCTACAT
Protein sequenceShow/hide protein sequence
MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH