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CsGy2G027170 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G027170
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionAnaphase-promoting complex subunit 13
Genome locationGy14Chr2:34740315..34745613
RNA-Seq ExpressionCsGy2G027170
SyntenyCsGy2G027170
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0070979 - protein K11-linked ubiquitination (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR008401 - Apc13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042977.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]2.41e-8487.25Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

KGN63398.1 hypothetical protein Csa_022587 [Cucumis sativus]1.44e-157100Show/hide
Query:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
        MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
Subjt:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC

Query:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
        HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
Subjt:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED

Query:  SNQETQPVDTDTWHDLALG
        SNQETQPVDTDTWHDLALG
Subjt:  SNQETQPVDTDTWHDLALG

TYK11109.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]5.63e-8386.58Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

XP_004148091.1 anaphase-promoting complex subunit 13 [Cucumis sativus]8.77e-35100Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG

XP_008459198.1 PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo]7.12e-8486.67Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALG
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG

TrEMBL top hitse value%identityAlignment
A0A0A0LNL0 Anaphase-promoting complex subunit 136.98e-158100Show/hide
Query:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
        MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
Subjt:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC

Query:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
        HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
Subjt:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED

Query:  SNQETQPVDTDTWHDLALG
        SNQETQPVDTDTWHDLALG
Subjt:  SNQETQPVDTDTWHDLALG

A0A1S3CA59 Anaphase-promoting complex subunit 133.45e-8486.67Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALG
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG

A0A5A7TMF9 Anaphase-promoting complex subunit 131.17e-8487.25Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

A0A5D3CLL3 Anaphase-promoting complex subunit 132.73e-8386.58Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

A0A6J1JH61 Anaphase-promoting complex subunit 135.49e-3395.08Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVR DDTEDSNQE QPVD DTWHDLALG
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALG

SwissProt top hitse value%identityAlignment
Q8L981 Anaphase-promoting complex subunit 139.5e-2075Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

Arabidopsis top hitse value%identityAlignment
AT1G73177.1 bonsai6.7e-2175Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGAATAACAATTAACAACGATACTTGTATAGTTTGTAGAAGAAATTACATAACCTTTTCTTTCAGTTCCTTTGCCACTCCATATTTTCGGTCTCCTCTGCTTTA
CTCACTCACTCAAACTCTCAGCATTTCAAACAAGAACTTGGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACAC
CGTCCCCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCG
CTCACGACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGATATT
GGGTTTTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATG
ATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCTTAGGTTTC
AGGCGTTAA
mRNA sequenceShow/hide mRNA sequence
CACAAATGATAAATTGAAACTAGTTTCATGACAATTCACCTTTGACATATATATGCAGAACTTTAATCTATGCATCATAAACTGAAAAATTACCTATTTGAATGAATGAC
GAGAATAACAATTAACAACGATACTTGTATAGTTTGTAGAAGAAATTACATAACCTTTTCTTTCAGTTCCTTTGCCACTCCATATTTTCGGTCTCCTCTGCTTTACTCAC
TCACTCAAACTCTCAGCATTTCAAACAAGAACTTGGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACACCGTCC
CCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCGCTCAC
GACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGATATTGGGTT
TTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGATCTT
TTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCTTAGGTTTCAGGCG
TTAAGGCCAAGTAAAGAAATGATGAGAAGCTTGATAAGCGAGAAGGGTTGTCGAGGCGTTTAGTTTAAGCTTAAGTGTTGCTTTTGTATTTTTGTTAAGAGTTATAATAT
AAGCGGATTGTATAACACATGTTTCAAGTAATAAAAGTTTTAAGTTTCGGTTACTTATATAGTATTAAG
Protein sequenceShow/hide protein sequence
MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYS
LTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGF
RR