; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G027360 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G027360
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPolyprotein
Genome locationGy14Chr2:34920708..34922174
RNA-Seq ExpressionCsGy2G027360
SyntenyCsGy2G027360
Gene Ontology termsNA
InterPro domainsIPR004902 - Rhabdovirus nucleoprotein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAF42361.1 TPA_asm: N [Lolium perenne virus 1]1.19e-0823.74Show/hide
Query:  LKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLG------------------------------------RVASSLNLSPKDLTKACWHKL
        +K  Y + YK++FP+    + K CI+G    + N  + K  L                                     +V    +  P++L+   WH+ 
Subjt:  LKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLG------------------------------------RVASSLNLSPKDLTKACWHKL

Query:  TKMPLNSLVTIL--SKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------PPETRAIYRRWANRI
        T+  L  +  IL    ++ ++N       + TW YAR+     F  IQ+  C  L C LA + +++G  GNQ+              RAI  RWA R+
Subjt:  TKMPLNSLVTIL--SKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------PPETRAIYRRWANRI

KGN63419.1 hypothetical protein Csa_021883 [Cucumis sativus]2.92e-282100Show/hide
Query:  MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPI
        MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPI
Subjt:  MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPI

Query:  AAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYIS
        AAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYIS
Subjt:  AAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYIS

Query:  LEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK
        LEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK
Subjt:  LEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK

Query:  VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD
        VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD
Subjt:  VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD

XP_015895577.1 uncharacterized protein LOC107429412 [Ziziphus jujuba]1.11e-0637.93Show/hide
Query:  RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGD
        RVA+ LN +P DL+ A  H++T+  L  +  IL      ++       R TWKYAR+F  E F+ + +K C  L  +LAMI E++G+
Subjt:  RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGD

XP_037459373.1 uncharacterized protein LOC119330369 [Triticum dicoccoides]7.97e-1025.12Show/hide
Query:  AMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLG-----------------------------
        A  YIS      + S    ++  A A  +   + + Y   FP+      K CI+     ++  S  + TL                              
Subjt:  AMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLG-----------------------------

Query:  -------RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDP
               R    L+ S   L    WH++TK  L SL  +        ++    N R TWKYAR++G+EYF  ++S +C +L C LA+IC+++    NQD 
Subjt:  -------RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDP

Query:  ---PETRAIYRRWAN
             TR     W N
Subjt:  ---PETRAIYRRWAN

YP_009130617.1 polyprotein [Black grass varicosavirus-like virus]2.69e-1027.91Show/hide
Query:  KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG-----------------FVWAFQNVSILKGTL-----------GRVASSLNLS---
        KSA N  R++E+     +K  Y + YK++FP+      + CI+G                 F+++F  ++  KG             G  A SL +    
Subjt:  KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG-----------------FVWAFQNVSILKGTL-----------GRVASSLNLS---

Query:  -----PKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------
             P++L+   WH+ T+  L  +  IL      S+  G  +   +GTW YAR+    YF  IQ+K C  L C LA +   IG  GNQ+          
Subjt:  -----PKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------

Query:  PPETRAIYRRWANRI
          E +AI  +WA R+
Subjt:  PPETRAIYRRWANRI

TrEMBL top hitse value%identityAlignment
A0A024HA00 Coat protein1.30e-1027.91Show/hide
Query:  KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG-----------------FVWAFQNVSILKGTL-----------GRVASSLNLS---
        KSA N  R++E+     +K  Y + YK++FP+      + CI+G                 F+++F  ++  KG             G  A SL +    
Subjt:  KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG-----------------FVWAFQNVSILKGTL-----------GRVASSLNLS---

Query:  -----PKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------
             P++L+   WH+ T+  L  +  IL      S+  G  +   +GTW YAR+    YF  IQ+K C  L C LA +   IG  GNQ+          
Subjt:  -----PKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------

Query:  PPETRAIYRRWANRI
          E +AI  +WA R+
Subjt:  PPETRAIYRRWANRI

A0A0A0LR10 Uncharacterized protein1.41e-282100Show/hide
Query:  MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPI
        MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPI
Subjt:  MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPI

Query:  AAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYIS
        AAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYIS
Subjt:  AAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYIS

Query:  LEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK
        LEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK
Subjt:  LEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK

Query:  VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD
        VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD
Subjt:  VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD

A0A0D6DU22 Polyprotein1.30e-1027.91Show/hide
Query:  KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG-----------------FVWAFQNVSILKGTL-----------GRVASSLNLS---
        KSA N  R++E+     +K  Y + YK++FP+      + CI+G                 F+++F  ++  KG             G  A SL +    
Subjt:  KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG-----------------FVWAFQNVSILKGTL-----------GRVASSLNLS---

Query:  -----PKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------
             P++L+   WH+ T+  L  +  IL      S+  G  +   +GTW YAR+    YF  IQ+K C  L C LA +   IG  GNQ+          
Subjt:  -----PKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQD----------

Query:  PPETRAIYRRWANRI
          E +AI  +WA R+
Subjt:  PPETRAIYRRWANRI

A0A540NKE7 Uncharacterized protein2.09e-0633.66Show/hide
Query:  RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRA
        R  + L+  P DL KA    + K  +   + I+     ES I        RGT++YAR+F S+ F  +QSK C  L C+LA +C++ G  G  D  +   
Subjt:  RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPN--VRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRA

Query:  I
        I
Subjt:  I

A0A6P4B9M9 uncharacterized protein LOC1074294125.36e-0737.93Show/hide
Query:  RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGD
        RVA+ LN +P DL+ A  H++T+  L  +  IL      ++       R TWKYAR+F  E F+ + +K C  L  +LAMI E++G+
Subjt:  RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATGTTAATTCAGGCTCGTCCACAGCTGATGATTTTGCTCGAAGAATAGAGGCATCATTGAGGGCTGCAATAAGTCAGCATGAAGCAGCAATACAGTCTCTTCC
AGCACCGGTAAGACAAGAAGTCGAGACTGCAGCAACAGAGCAGGCAGAAAACTCGGTGGGGGCAATTGTTCGATTAAGGAACGAGGAACGTGGGAAAGGTACAGCAGCTG
ATACTTCTGTCAAACCTCAAGCGTCCCAAAAAGCTCCACAAGTAGCTCCTGCAGTTATCAACCCTGTACCTGCCCCTATTGCTGCACAACCAGCAACTGTAGGGAATATA
ATTCCTAGAATCGTGGGACCTCTAGAAGCAGATGTAATAGGCATTAGGGGAATGCAACTAGTACATAGGGAAGAACTGCCGGACGTCGGATATCTCCACCCTGGATTTAT
AAGAGAGTTAGAGTGGAGTGACGGTATTTTAAGAGAAATGGGAGGACGACTGTCAATCCTTCCAGATGCGGATTTAAAAGAGCATGCAGAAAGACTGTGGAGAGGACTAA
CAGTACAATGTACAAATAGAGTCACCGGAATTGCAATGCTGTACATTAGCTTGGAACCTCCTTTCACCATTAAATCCGCAGGAAACCGTAGCTGGGAAAAAGCTTATGCA
GGTGATCTGAAGGAGAATTATTTGAAGATTTACAAAGAGCAGTTTCCGATTGATGCTCCTGTGTTATCAAAGGCTTGCATTGATGGATTTGTCTGGGCATTTCAGAATGT
CTCCATTTTGAAAGGAACATTGGGGAGGGTAGCATCATCACTGAACCTTTCTCCAAAAGATCTAACTAAAGCCTGCTGGCATAAGCTGACAAAGATGCCTTTGAACTCAT
TGGTAACTATTTTGTCCAAAGTAACTGCAGAAAGTAATATTGCAGGGGCACCAAATGTAAGAGGGACCTGGAAATATGCAAGAGTTTTTGGCAGTGAATACTTTATCGGA
ATCCAATCTAAAAGGTGTCCCATCTTATTCTGTTTGTTAGCAATGATCTGTGAAAGAATTGGAGACATGGGGAATCAAGATCCACCGGAGACTAGAGCCATCTATAGAAG
ATGGGCAAATAGGATATGTGACTTCTATATGCCGACCTTGTTTTTTTCTTTTAAATTTGCTTATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATGTTAATTCAGGCTCGTCCACAGCTGATGATTTTGCTCGAAGAATAGAGGCATCATTGAGGGCTGCAATAAGTCAGCATGAAGCAGCAATACAGTCTCTTCC
AGCACCGGTAAGACAAGAAGTCGAGACTGCAGCAACAGAGCAGGCAGAAAACTCGGTGGGGGCAATTGTTCGATTAAGGAACGAGGAACGTGGGAAAGGTACAGCAGCTG
ATACTTCTGTCAAACCTCAAGCGTCCCAAAAAGCTCCACAAGTAGCTCCTGCAGTTATCAACCCTGTACCTGCCCCTATTGCTGCACAACCAGCAACTGTAGGGAATATA
ATTCCTAGAATCGTGGGACCTCTAGAAGCAGATGTAATAGGCATTAGGGGAATGCAACTAGTACATAGGGAAGAACTGCCGGACGTCGGATATCTCCACCCTGGATTTAT
AAGAGAGTTAGAGTGGAGTGACGGTATTTTAAGAGAAATGGGAGGACGACTGTCAATCCTTCCAGATGCGGATTTAAAAGAGCATGCAGAAAGACTGTGGAGAGGACTAA
CAGTACAATGTACAAATAGAGTCACCGGAATTGCAATGCTGTACATTAGCTTGGAACCTCCTTTCACCATTAAATCCGCAGGAAACCGTAGCTGGGAAAAAGCTTATGCA
GGTGATCTGAAGGAGAATTATTTGAAGATTTACAAAGAGCAGTTTCCGATTGATGCTCCTGTGTTATCAAAGGCTTGCATTGATGGATTTGTCTGGGCATTTCAGAATGT
CTCCATTTTGAAAGGAACATTGGGGAGGGTAGCATCATCACTGAACCTTTCTCCAAAAGATCTAACTAAAGCCTGCTGGCATAAGCTGACAAAGATGCCTTTGAACTCAT
TGGTAACTATTTTGTCCAAAGTAACTGCAGAAAGTAATATTGCAGGGGCACCAAATGTAAGAGGGACCTGGAAATATGCAAGAGTTTTTGGCAGTGAATACTTTATCGGA
ATCCAATCTAAAAGGTGTCCCATCTTATTCTGTTTGTTAGCAATGATCTGTGAAAGAATTGGAGACATGGGGAATCAAGATCCACCGGAGACTAGAGCCATCTATAGAAG
ATGGGCAAATAGGATATGTGACTTCTATATGCCGACCTTGTTTTTTTCTTTTAAATTTGCTTATGATTGA
Protein sequenceShow/hide protein sequence
MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPIAAQPATVGNI
IPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYA
GDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIG
IQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD