; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G000690 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G000690
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncold shock domain-containing protein 3
Genome locationGy14Chr3:489311..490644
RNA-Seq ExpressionCsGy3G000690
SyntenyCsGy3G000690
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577777.1 Cold shock protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.39e-16192.99Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGG RGGRGGGGGG 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
        YGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDCTR SNRGGGGGGGG CFTCGEVGHLARDCPRGNSGGGG GGG    ACYNCGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG

Query:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPD
        GAGGGSGGG  GGGCFNCGEYGH+ARDCQNESRGSGGGGGGRFGGGG     +NTCFNCGKSGHFARECPD
Subjt:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPD

XP_004146143.1 cold shock domain-containing protein 3 [Cucumis sativus]2.36e-184100Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
        YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG

Query:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
        GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
Subjt:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS

XP_008448549.1 PREDICTED: cold shock domain-containing protein 3 [Cucumis melo]3.95e-16996.03Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG   RGGRGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG

Query:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD
        GGGYGFGGWRGGDRRNGNSG GGGGCYQCGEQGHLARDCTRPSNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGG GGG ACYNCGGFGHLARD
Subjt:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD

Query:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
        CNRGGAGGGSGGGGGGG CFNCGEYGHIARDCQNESRGSGGGGG RFGGGGGGG  SNTCFNCGKSGHFARECPDAS
Subjt:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS

XP_023540854.1 cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo]8.64e-16293.04Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKAIEVVALDGSSGNRRDNFGGGGG RGGRGGGG   
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
        YGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDC RPSNRGGGGG GGGCFTCGEVGHLARDCPRGNSGGGGGG GGGG  CYNCGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG

Query:  GAGGGSGGGGGGGG-CFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDA
        GAGGGSGGGGGGGG CFNCGEYGH+ARDCQNESR SGGGG  RFGGGGGGG  +NTCFNCGKSGHFARECPDA
Subjt:  GAGGGSGGGGGGGG-CFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDA

XP_038876618.1 cold shock domain-containing protein 3 [Benincasa hispida]2.49e-16995.97Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGG RGGRGGGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
        YGFGGWRGGDRRNGNSGAGGG CYQCGEQGHLARDCTR SNR GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGG GACYNCGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG

Query:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGG-GGGGGSNTCFNCGKSGHFARECPDA
        GAGGGSGG   GGGCFNCGEYGHIARDCQNESRGSGGGGG RFGGGG GGGGG NTCFNCGKSGHFARECPDA
Subjt:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGG-GGGGGSNTCFNCGKSGHFARECPDA

TrEMBL top hitse value%identityAlignment
A0A0A0L4X7 Uncharacterized protein1.14e-184100Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
        YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG

Query:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
        GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
Subjt:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS

A0A1S3BKK1 cold shock domain-containing protein 31.91e-16996.03Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG   RGGRGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG

Query:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD
        GGGYGFGGWRGGDRRNGNSG GGGGCYQCGEQGHLARDCTRPSNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGG GGG ACYNCGGFGHLARD
Subjt:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD

Query:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
        CNRGGAGGGSGGGGGGG CFNCGEYGHIARDCQNESRGSGGGGG RFGGGGGGG  SNTCFNCGKSGHFARECPDAS
Subjt:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS

A0A5D3CJR2 Cold shock domain-containing protein 31.91e-16996.03Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG   RGGRGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG

Query:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD
        GGGYGFGGWRGGDRRNGNSG GGGGCYQCGEQGHLARDCTRPSNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGG GGG ACYNCGGFGHLARD
Subjt:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD

Query:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
        CNRGGAGGGSGGGGGGG CFNCGEYGHIARDCQNESRGSGGGGG RFGGGGGGG  SNTCFNCGKSGHFARECPDAS
Subjt:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS

A0A6J1HNK3 cold shock domain-containing protein 3-like3.72e-16092.25Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGG RGGRGGGGGG 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG
        YGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGG GGG     ACYNCGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRG

Query:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPD
        GAGGGSGGG  GG CFNCGEYGH+ARDCQNESRGSGGGGG RFGGGG     +NTCFNCGKSGHFARECPD
Subjt:  GAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPD

E5RDD6 Cold-shock DNA-binding family protein1.91e-16996.03Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG   RGGRGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG---RGGRGGGG

Query:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD
        GGGYGFGGWRGGDRRNGNSG GGGGCYQCGEQGHLARDCTRPSNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGG GGG ACYNCGGFGHLARD
Subjt:  GGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD

Query:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS
        CNRGGAGGGSGGGGGGG CFNCGEYGHIARDCQNESRGSGGGGG RFGGGGGGG  SNTCFNCGKSGHFARECPDAS
Subjt:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 13.3e-4650.87Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGG
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+KA+ V A  G S  + +N  G G  RGG G G    G  G
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGG

Query:  Y-----GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGG--GGGGACYNCGGF
        +     G GG  GG  R      GG GCY CG+ GH ARDCT   N   RG   GG  GC+TCG+VGH+ARDC + + G G   G   GG   CY CG  
Subjt:  Y-----GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGG--GGGGACYNCGGF

Query:  GHLARDC-NRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGG----GGGGRFG-----GGGGGGGGSNTCFNCGKSGHFAREC
        GH ARDC  +  AG    GGGG G C++CG  GHIARDC  + + S G    GG G         G GGGG  N C+ CGK GHFAREC
Subjt:  GHLARDC-NRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGG----GGGGRFG-----GGGGGGGGSNTCFNCGKSGHFAREC

P27484 Glycine-rich protein 21.2e-3750.18Show/hide
Query:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG-GG
        MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VEF++  G DG++KA++V   DG++       GGGGGGRGG G GG
Subjt:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG-GG

Query:  GGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD
        G GGYG GG RGG R  G    GG G Y                  GGGGG GGG                   GGGGGG GGGGG              
Subjt:  GGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARD

Query:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFAREC
                G GG GGG GCF CGE GH ARDC   S+  GGGGGGRFGGGGGGGGG   C+ CG+ GHFAREC
Subjt:  CNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFAREC

Q38896 Cold shock domain-containing protein 41.7e-3147.56Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGF
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+ KAIEV   DG+        GG  GGRGG GGGGG     
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGF

Query:  GGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGGAG
           RGG R  G+ G G GG               R S   GGGGG   CF CGE GH+AR+C   + GGGG  GGGGGG                R G+G
Subjt:  GGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGGAG

Query:  GGSGGGGGGGGCFNCGEYGHIARDC
        GG GGGGGG  C++CGE GH ARDC
Subjt:  GGSGGGGGGGGCFNCGEYGHIARDC

Q41188 Cold shock protein 21.7e-3449.57Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGY
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ + KAI+V   DG+   GN   + GG  GGRGG GGG GGG 
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGG
        G GG  G          GGGG Y                 RGGGG GG  C+ CGE GH+ARDC  G  G GGGGGG GGG  Y  GG G+         
Subjt:  GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGG

Query:  AGGGSGGGGGGGGCFNCGEYGHIARDCQNESR
         GGG GGGGGGG C++CGE GH ARDC +  R
Subjt:  AGGGSGGGGGGGGCFNCGEYGHIARDCQNESR

Q94C69 Cold shock domain-containing protein 33.6e-5352.19Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+KAIEV A  G S N+++N   G GG     G         
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------

Query:  -GGGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRP--SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSG---GGGGGGGGGGGACYNCGG
         GG GG  FGG  GG RR+G    G G CY CG+ GH ARDC +    N GGGGGGG  C++CGEVGHLA+DC  G+ G   GGGGG G GG  CY CGG
Subjt:  -GGGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRP--SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSG---GGGGGGGGGGGACYNCGG

Query:  FGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGG-----------------GRFGGGGGGGGGSNTCFNCGKSGHFAREC
         GH ARDC +    GG   GGGG  C+ CG  GHIA+ C ++    GGGGG                  R  G  GGGGGSN CF CGK GHFAREC
Subjt:  FGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGG-----------------GRFGGGGGGGGGSNTCFNCGKSGHFAREC

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 32.5e-5452.19Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+KAIEV A  G S N+++N   G GG     G         
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------

Query:  -GGGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRP--SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSG---GGGGGGGGGGGACYNCGG
         GG GG  FGG  GG RR+G    G G CY CG+ GH ARDC +    N GGGGGGG  C++CGEVGHLA+DC  G+ G   GGGGG G GG  CY CGG
Subjt:  -GGGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRP--SNRGGGGGGGGGCFTCGEVGHLARDCPRGNSG---GGGGGGGGGGGACYNCGG

Query:  FGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGG-----------------GRFGGGGGGGGGSNTCFNCGKSGHFAREC
         GH ARDC +    GG   GGGG  C+ CG  GHIA+ C ++    GGGGG                  R  G  GGGGGSN CF CGK GHFAREC
Subjt:  FGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGG-----------------GRFGGGGGGGGGSNTCFNCGKSGHFAREC

AT2G21060.1 glycine-rich protein 2B1.2e-3247.56Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGF
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+ KAIEV   DG+        GG  GGRGG GGGGG     
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGF

Query:  GGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGGAG
           RGG R  G+ G G GG               R S   GGGGG   CF CGE GH+AR+C   + GGGG  GGGGGG                R G+G
Subjt:  GGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGGAG

Query:  GGSGGGGGGGGCFNCGEYGHIARDC
        GG GGGGGG  C++CGE GH ARDC
Subjt:  GGSGGGGGGGGCFNCGEYGHIARDC

AT4G36020.1 cold shock domain protein 12.3e-4750.87Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGG
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+KA+ V A  G S  + +N  G G  RGG G G    G  G
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGG

Query:  Y-----GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGG--GGGGACYNCGGF
        +     G GG  GG  R      GG GCY CG+ GH ARDCT   N   RG   GG  GC+TCG+VGH+ARDC + + G G   G   GG   CY CG  
Subjt:  Y-----GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGG--GGGGACYNCGGF

Query:  GHLARDC-NRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGG----GGGGRFG-----GGGGGGGGSNTCFNCGKSGHFAREC
        GH ARDC  +  AG    GGGG G C++CG  GHIARDC  + + S G    GG G         G GGGG  N C+ CGK GHFAREC
Subjt:  GHLARDC-NRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGG----GGGGRFG-----GGGGGGGGSNTCFNCGKSGHFAREC

AT4G38680.1 glycine rich protein 21.2e-3549.57Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGY
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ + KAI+V   DG+   GN   + GG  GGRGG GGG GGG 
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGG
        G GG  G          GGGG Y                 RGGGG GG  C+ CGE GH+ARDC  G  G GGGGGG GGG  Y  GG G+         
Subjt:  GFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGG

Query:  AGGGSGGGGGGGGCFNCGEYGHIARDCQNESR
         GGG GGGGGGG C++CGE GH ARDC +  R
Subjt:  AGGGSGGGGGGGGCFNCGEYGHIARDCQNESR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCCAAGGGCTTTGGCTTCATCAAGCCAGATGTTGAAGGTCCGGATCTGTTTGTTCATCAATCATC
TATTAAATCCGATGGTTACCGGAGCCTTGTCGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGAAAGTCGAAAGCCATTGAGGTTGTTGCGCTTGATG
GATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGAGGTGGAAGGGGTGGCCGCGGGGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGAGGAGGTGAT
AGGCGGAATGGGAACAGTGGAGCAGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTGGCTAGAGATTGTACTCGTCCTAGTAACCGCGGCGGTGGCGGCGG
TGGAGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGTCACTTAGCGAGGGATTGTCCACGAGGGAACAGTGGTGGAGGCGGAGGTGGAGGCGGCGGTGGCGGTGGGGCTT
GCTACAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGAGCTGGAGGTGGAAGTGGTGGCGGCGGCGGCGGCGGTGGTTGTTTTAATTGTGGGGAG
TATGGGCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGTGGTGGTGGTGGCGGAAGATTTGGTGGCGGCGGCGGCGGTGGCGGTGGCTCAAACACTTGCTT
CAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAGGGTAAGCGAATTAGGGTTTTTGGAAAGGGGTAGATCTCATTCTCTTTTGAGCTTCTATATATTGGGAAACCCTTTGGATATTTCGTTCCTCGGTCGCCATTTTT
TGCTCACAAATTTTCTTCTCAAACTTACTTTGTGAAGATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCCAAGGGCTTTGGCTTCATCAAGCCAG
ATGTTGAAGGTCCGGATCTGTTTGTTCATCAATCATCTATTAAATCCGATGGTTACCGGAGCCTTGTCGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGAT
GGAAAGTCGAAAGCCATTGAGGTTGTTGCGCTTGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGAGGTGGAAGGGGTGGCCGCGGGGGAGGTGGCGG
TGGAGGTTATGGGTTTGGTGGTTGGAGAGGAGGTGATAGGCGGAATGGGAACAGTGGAGCAGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTGGCTAGAG
ATTGTACTCGTCCTAGTAACCGCGGCGGTGGCGGCGGTGGAGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGTCACTTAGCGAGGGATTGTCCACGAGGGAACAGTGGT
GGAGGCGGAGGTGGAGGCGGCGGTGGCGGTGGGGCTTGCTACAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGAGCTGGAGGTGGAAGTGGTGG
CGGCGGCGGCGGCGGTGGTTGTTTTAATTGTGGGGAGTATGGGCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGTGGTGGTGGTGGCGGAAGATTTGGTG
GCGGCGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCATCTTGATAAGGAGGGGGAAAGAGTAAT
AGTATATAATTTTTCCTTTAACCTCAATATTGTCCTTTAATTATGTTCTTCTTTTGGTGTGGATGGTGGCTATACGTAGCTTTACTTGAGAGGTTTCTATTAATTTTGAT
ATTTTCCATGGTTGTTTAGCTCTTTAGGGGCAAATTTTTCTGGTTCACACATGATGTGGTAATTCGGTTAAATGAGGCATTTTTATCTTCTGTTCTTGTTTTGTTACCTT
TTCATATTTCGAGTTAATGTTGTGCGATGTCTGATTCAATTGTAATTATCCATGTTAACATTTAATAACACATGGAATGCAGTAGCTAAGTTCGATTTGATGATATACGT
TGTTTCTTGTTGGC
Protein sequenceShow/hide protein sequence
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGD
RRNGNSGAGGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGE
YGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS