CuGenDBv2

Gene ID	CsGy3G001680
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	late embryogenesis abundant protein 6
Genome location	Gy14Chr3:1254216..1255717
RNA-Seq Expression	CsGy3G001680
Synteny	CsGy3G001680
Gene Ontology terms	GO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domains	IPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577696.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia]

6.13e-54

80.83

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
        MQSAMEKLSNMGSVAK+KLKICRAKLDEKV+KAS KTAEERKI EERRKAA AEAKRELHEAKARHAAQKLR R+SHVLG   HHQ P+EGG+A      
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA

Query:  TNVPAYPITSPEGYHPGHKI
         NVPAYPI SPEGY+PGH+I
Subjt:  TNVPAYPITSPEGYHPGHKI

XP_004148757.1 late embryogenesis abundant protein 6 [Cucumis sativus]

2.76e-74

100

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
        MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA

Query:  TNVPAYPITSPEGYHPGHKI
        TNVPAYPITSPEGYHPGHKI
Subjt:  TNVPAYPITSPEGYHPGHKI

XP_008448704.1 PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo]

2.08e-67

93.39

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG-HRHHQSPMEGGAATHLGG
        MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKI+EERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG H HH SP+EGGAATHLGG
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG-HRHHQSPMEGGAATHLGG

Query:  ATNVPAYPITSPEGYHPGHKI
         TNVPAYPI SPEGY+PGHKI
Subjt:  ATNVPAYPITSPEGYHPGHKI

XP_022923386.1 late embryogenesis abundant protein 6-like isoform X1 [Cucurbita moschata]

1.76e-53

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
        MQSAMEKLSNMGSVAK+KLKICRAKLDEKV+KAS KTAEERKI EERRKAA AEAKRELHEAKARHAAQKLR R+SHV+G   HHQ P+EGG+A      
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA

Query:  TNVPAYPITSPEGYHPGHKI
         NVPAYPI SPEGY+PGH+I
Subjt:  TNVPAYPITSPEGYHPGHKI

XP_038906206.1 late embryogenesis abundant protein 6-like [Benincasa hispida]

2.82e-58

86.78

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
        MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKT EERKI EERRKAATAEAKRELHEAKARHAAQKLR++KSHVLGGH HH  PMEG AAT+LG A
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA

Query:  TNVPA-YPITSPEGYHPGHKI
         NVPA YPI + EGY+PGHKI
Subjt:  TNVPA-YPITSPEGYHPGHKI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1A9 Uncharacterized protein

8.37e-55

100

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Query:  VEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGATNVPAYPITSPEGYHPGHKI
        VEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGATNVPAYPITSPEGYHPGHKI
Subjt:  VEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGATNVPAYPITSPEGYHPGHKI

A0A1S3BKB4 uncharacterized protein LOC103490795

1.01e-67

93.39

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG-HRHHQSPMEGGAATHLGG
        MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKI+EERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG H HH SP+EGGAATHLGG
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG-HRHHQSPMEGGAATHLGG

Query:  ATNVPAYPITSPEGYHPGHKI
         TNVPAYPI SPEGY+PGHKI
Subjt:  ATNVPAYPITSPEGYHPGHKI

A0A5D3CHS9 Seed maturation protein

1.01e-67

93.39

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG-HRHHQSPMEGGAATHLGG
        MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKI+EERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG H HH SP+EGGAATHLGG
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGG-HRHHQSPMEGGAATHLGG

Query:  ATNVPAYPITSPEGYHPGHKI
         TNVPAYPI SPEGY+PGHKI
Subjt:  ATNVPAYPITSPEGYHPGHKI

A0A6J1E6N7 late embryogenesis abundant protein 6-like isoform X1

8.51e-54

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
        MQSAMEKLSNMGSVAK+KLKICRAKLDEKV+KAS KTAEERKI EERRKAA AEAKRELHEAKARHAAQKLR R+SHV+G   HHQ P+EGG+A      
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA

Query:  TNVPAYPITSPEGYHPGHKI
         NVPAYPI SPEGY+PGH+I
Subjt:  TNVPAYPITSPEGYHPGHKI

A0A6J1HN56 late embryogenesis abundant protein 6-like isoform X1

2.84e-52

78.33

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA
        MQSAMEKLSNMGSVAK+KLKICRAKL+EKV+KAS KTAEERKI+EERRKAA AE KRELHEAKARHAAQKLR R+SHVLG   HHQ P+E G+A      
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGA

Query:  TNVPAYPITSPEGYHPGHKI
         NVPAYPI SPEGY+PGH+I
Subjt:  TNVPAYPITSPEGYHPGHKI

SwissProt top hits

e value

%identity

Alignment

Q39138 Late embryogenesis abundant protein 6

9.4e-14

43.18

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHV----LGGHRHHQSP-------M
        MQSA +K+S+M S AKEK+ IC+AK DEK E+A  +T EE++I  +RRKA  AEA  ++H AKA HA  KL  ++SH      G H   Q+P       M
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHV----LGGHRHHQSP-------M

Query:  EGGAATHLGGATNVPA---YPITSPEGYHPGH
          G   +  G T+VP    +P   P G+H  H
Subjt:  EGGAATHLGGATNVPA---YPITSPEGYHPGH

Q96273 Late embryogenesis abundant protein 18

5.0e-07

43.96

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEG
        MQSA EK+S+M S AKEKL I  AK     EK   +T +E+K+ +ER K+  A+AK +LH++KA HAA        H L GH  + +   G
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEG

Arabidopsis top hits

e value

%identity

Alignment

AT1G32560.1 Late embryogenesis abundant protein, group 1 protein

6.7e-15

43.18

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHV----LGGHRHHQSP-------M
        MQSA +K+S+M S AKEK+ IC+AK DEK E+A  +T EE++I  +RRKA  AEA  ++H AKA HA  KL  ++SH      G H   Q+P       M
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHV----LGGHRHHQSP-------M

Query:  EGGAATHLGGATNVPA---YPITSPEGYHPGH
          G   +  G T+VP    +P   P G+H  H
Subjt:  EGGAATHLGGATNVPA---YPITSPEGYHPGH

AT2G35300.1 Late embryogenesis abundant protein, group 1 protein

3.5e-08

43.96

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Query:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEG
        MQSA EK+S+M S AKEKL I  AK     EK   +T +E+K+ +ER K+  A+AK +LH++KA HAA        H L GH  + +   G
Subjt:  MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEG

Sequences

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CDS sequence

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ATGCAGTCTGCCATGGAGAAGCTGAGTAACATGGGAAGTGTTGCTAAAGAAAAGCTCAAAATTTGTAGAGCCAAACTCGACGAGAAGGTGGAGAAAGCTTCGGTGAAGAC
AGCAGAGGAGAGGAAGATCATTGAGGAGAGAAGAAAGGCAGCAACGGCGGAGGCAAAGCGTGAGCTACACGAGGCGAAAGCCAGACATGCTGCTCAAAAGCTAAGGAATA
GGAAATCACATGTACTTGGTGGCCATCGACACCATCAATCACCTATGGAGGGCGGTGCCGCTACACATCTTGGCGGAGCAACAAATGTTCCGGCTTATCCTATAACCAGC
CCGGAGGGGTACCATCCCGGACATAAAATTTAA

mRNA sequence

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Protein sequence

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MQSAMEKLSNMGSVAKEKLKICRAKLDEKVEKASVKTAEERKIIEERRKAATAEAKRELHEAKARHAAQKLRNRKSHVLGGHRHHQSPMEGGAATHLGGATNVPAYPITS
PEGYHPGHKI

CsGy3G001680 (gene) of Cucumber (Gy14) v2.1 genome