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CsGy3G001890 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G001890
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionVacuolar protein sorting-associated protein 55-like protein
Genome locationGy14Chr3:1460380..1462362
RNA-Seq ExpressionCsGy3G001890
SyntenyCsGy3G001890
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150170.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus]2.49e-90100Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

XP_008448742.1 PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo]1.44e-8999.28Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

XP_022923424.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata]1.33e-8593.48Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACL MGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDS+DSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFV+AILCFMGMSEDD Y+MF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

XP_022965211.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima]1.89e-8593.48Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACL MGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDS DSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFV+AILCFMGMSEDD Y+MF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

XP_038906097.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida]2.80e-8795.65Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSN+SWINATKFLTGASTVGSIAIP+ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFV+AILCFMGMSEDDDY+MF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

TrEMBL top hitse value%identityAlignment
A0A0A0L5B3 Uncharacterized protein1.21e-90100Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

A0A1S3BJT4 vacuolar protein sorting-associated protein 55 homolog6.98e-9099.28Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

A0A5D3CIX3 Vacuolar protein sorting-associated protein 55-like protein6.98e-9099.28Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

A0A6J1E6D1 vacuolar protein sorting-associated protein 55 homolog6.45e-8693.48Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACL MGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDS+DSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFV+AILCFMGMSEDD Y+MF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

A0A6J1HL31 vacuolar protein sorting-associated protein 55 homolog9.16e-8693.48Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MADLP SLQACL MGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDS DSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF
        AGIIGWGAMAMDLSSFVVFV+AILCFMGMSEDD Y+MF
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSMF

SwissProt top hitse value%identityAlignment
O89013 Leptin receptor gene-related protein4.5e-0429.01Show/hide
Query:  GKVAFLAILVSG--GIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATK----FLTGASTVGSIAIPVILKHAGIIGW
        G  A +A+  SG  G+   +L CAL  Y  +WP+  +I YV+ P+P         +   T  +D+  +A +    F T    V +  +PV+L    +I W
Subjt:  GKVAFLAILVSG--GIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATK----FLTGASTVGSIAIPVILKHAGIIGW

Query:  GAMAMDLS-SFVVFVVAILCFMGMSEDDDYS
        GA  + L+ + V+F+     F+     DD+S
Subjt:  GAMAMDLS-SFVVFVVAILCFMGMSEDDDYS

P47111 Vacuolar protein sorting-associated protein 554.4e-0728.68Show/hide
Query:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGS--DSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMD
        K+  L+  ++ G ++ IL+CAL++N++P+  +++++L P+P  +F AG+   +S   +DS+++  +   FLTG      IA+PV+  H  +IG  +  M 
Subjt:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGS--DSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMD

Query:  LSSFVVFVVAILCFMGMSEDD---DYSMF
        +   ++   +I+ F    + D   D S+F
Subjt:  LSSFVVFVVAILCFMGMSEDD---DYSMF

Q18319 Vacuolar protein sorting-associated protein 55 homolog2.8e-0630.65Show/hide
Query:  GMGKVAFLAILVSGGIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMA
        G+  VA LA     G+   +L CAL  Y  W PM  +  YVL P+PLL           T   ++ I    F+T    + + A+P++L HAG I   A  
Subjt:  GMGKVAFLAILVSGGIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMA

Query:  MDLSSFVVFVVAILCFMGMSEDDD
        +  +  V+    I+ +  +  DDD
Subjt:  MDLSSFVVFVVAILCFMGMSEDDD

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog1.1e-5073.91Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ +S++SWINA KFLTGAS VGS+AIP ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS
        AG+IGWGA+A+DLSS+VVF+VAIL +  +G + D+ YS
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS

Q9UUH1 Vacuolar protein sorting-associated protein 554.4e-0730.63Show/hide
Query:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMD-L
        K+  L+ +++ G ++ IL+CAL+ NW+P+L VI ++L P+P LL    S S     + + + ++  +F  GA+     A+P++  + G+IG  A  M  +
Subjt:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMD-L

Query:  SSFVVFVVAIL
           ++F+V  L
Subjt:  SSFVVFVVAIL

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein7.8e-5273.91Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ +S++SWINA KFLTGAS VGS+AIP ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS
        AG+IGWGA+A+DLSS+VVF+VAIL +  +G + D+ YS
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein7.8e-5273.91Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ +S++SWINA KFLTGAS VGS+AIP ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS
        AG+IGWGA+A+DLSS+VVF+VAIL +  +G + D+ YS
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein7.8e-5273.91Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ +S++SWINA KFLTGAS VGS+AIP ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS
        AG+IGWGA+A+DLSS+VVF+VAIL +  +G + D+ YS
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein7.8e-5273.91Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ +S++SWINA KFLTGAS VGS+AIP ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS
        AG+IGWGA+A+DLSS+VVF+VAIL +  +G + D+ YS
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein7.8e-5273.91Show/hide
Query:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ +S++SWINA KFLTGAS VGS+AIP ILKH
Subjt:  MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKH

Query:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS
        AG+IGWGA+A+DLSS+VVF+VAIL +  +G + D+ YS
Subjt:  AGIIGWGAMAMDLSSFVVFVVAILCF--MGMSEDDDYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTTACCAGCTTCTTTGCAGGCCTGTCTGGGTATGGGCAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATTGTGATGCAGATATTGGCATGTGCCTT
GTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTATTCTTTGCGGGGTCAGATAGTTCTTCGCTGTATACTGATTCTAACG
ATAGCTGGATCAATGCGACAAAATTCTTGACCGGAGCTTCGACTGTAGGAAGCATTGCCATCCCCGTTATTCTGAAGCATGCTGGGATCATTGGCTGGGGGGCAATGGCA
ATGGACCTCTCGTCATTCGTAGTATTTGTGGTTGCCATTTTGTGTTTCATGGGGATGAGCGAAGACGACGACTACTCTATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTACCAGCTTCTTTGCAGGCCTGTCTGGGTATGGGCAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATTGTGATGCAGATATTGGCATGTGCCTT
GTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTATTCTTTGCGGGGTCAGATAGTTCTTCGCTGTATACTGATTCTAACG
ATAGCTGGATCAATGCGACAAAATTCTTGACCGGAGCTTCGACTGTAGGAAGCATTGCCATCCCCGTTATTCTGAAGCATGCTGGGATCATTGGCTGGGGGGCAATGGCA
ATGGACCTCTCGTCATTCGTAGTATTTGTGGTTGCCATTTTGTGTTTCATGGGGATGAGCGAAGACGACGACTACTCTATGTTTTGA
Protein sequenceShow/hide protein sequence
MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMA
MDLSSFVVFVVAILCFMGMSEDDDYSMF