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CsGy3G002370 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G002370
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionHomeobox-leucine zipper family protein
Genome locationGy14Chr3:1851766..1852685
RNA-Seq ExpressionCsGy3G002370
SyntenyCsGy3G002370
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR006712 - HD-ZIP protein, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650051.1 hypothetical protein Csa_010109 [Cucumis sativus]1.65e-12597.31Show/hide
Query:  MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKE
        MESGVELFADRTSETGRSLLRSIEVNRMAPSTAD EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFR TEDQSAVLKE
Subjt:  MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKE

Query:  SSEEHDSLNPHLSHEALNRNIERKDWQNRKRAKSERQDIIGVARGSRTSNCYSKALNQNIERKDLVSEATGVTNGPMKPQRRRDPF
        SSEEHDSLNPHLSHEALNRNIERKDWQNRKRAKS+RQDIIGVARGSRTSNCYSKALN+NIERKDLVSEA GVTNGPMKPQRRRDPF
Subjt:  SSEEHDSLNPHLSHEALNRNIERKDWQNRKRAKSERQDIIGVARGSRTSNCYSKALNQNIERKDLVSEATGVTNGPMKPQRRRDPF

XP_004147222.1 homeobox-leucine zipper protein HAT4 [Cucumis sativus]3.85e-3973.53Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        +DRTSETGRSLLR I+VNRM PSTADCEEEA MS P+ST SSV GK  E EMN ED+DGD ACSR ISDE+DG T RK+ RLT+DQSAVL+ES +EH++L
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NP
        NP
Subjt:  NP

XP_008448815.2 PREDICTED: homeobox-leucine zipper protein HAT4 [Cucumis melo]3.75e-3973.53Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        +DRTSETGRSLLR I+VNRM PSTADCEEEA MS P+ST SSV GK  E EMN ED+DGD ACSR ISDE+DG T RK+ RLT+DQSAVL+ES +EH++L
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NP
        NP
Subjt:  NP

XP_031737898.1 homeobox-leucine zipper protein HAT4-like [Cucumis sativus]1.36e-6898.18Show/hide
Query:  MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKE
        MESGVELFADRTSETGRSLLRSIEVNRMAPSTAD EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFR TEDQSAVLKE
Subjt:  MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKE

Query:  SSEEHDSLNP
        SSEEHDSLNP
Subjt:  SSEEHDSLNP

XP_038906160.1 homeobox-leucine zipper protein HAT4 [Benincasa hispida]1.48e-3671.15Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPST--ADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHD
        +DRTSETGRSLLR I+VNRM PS+  ADCEEEA MS P+ST SSV GK  E EMN ED+DGD ACSR ISDE+DG T RK+ RLT+DQSAVL+ES +EH+
Subjt:  ADRTSETGRSLLRSIEVNRMAPST--ADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHD

Query:  SLNP
        +LNP
Subjt:  SLNP

TrEMBL top hitse value%identityAlignment
A0A0A0L5G0 HD-ZIP_N domain-containing protein2.96e-11473.88Show/hide
Query:  MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKE
        MESGVELFADRTSETGRSLLRSIEVNRMAPSTAD EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFR TEDQSAVLKE
Subjt:  MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKE

Query:  SSEEHDSLNP-----------------------------------------------------------HLSHEALNRNIERKDWQNRKRAKSERQDIIG
        SSEEHDSLNP                                                           HLSHEALNRNIERKDWQNRKRAKS+RQDIIG
Subjt:  SSEEHDSLNP-----------------------------------------------------------HLSHEALNRNIERKDWQNRKRAKSERQDIIG

Query:  VARGSRTSNCYSKALNQNIERKDLVSEATGVTNGPMKPQRRRDPF
        VARGSRTSNCYSKALN+NIERKDLVSEA GVTNGPMKPQRRRDPF
Subjt:  VARGSRTSNCYSKALNQNIERKDLVSEATGVTNGPMKPQRRRDPF

A0A0A0L6T6 Homeobox domain-containing protein1.86e-3973.53Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        +DRTSETGRSLLR I+VNRM PSTADCEEEA MS P+ST SSV GK  E EMN ED+DGD ACSR ISDE+DG T RK+ RLT+DQSAVL+ES +EH++L
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NP
        NP
Subjt:  NP

A0A1S3BJZ9 homeobox-leucine zipper protein HAT41.82e-3973.53Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        +DRTSETGRSLLR I+VNRM PSTADCEEEA MS P+ST SSV GK  E EMN ED+DGD ACSR ISDE+DG T RK+ RLT+DQSAVL+ES +EH++L
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NP
        NP
Subjt:  NP

A0A5D3CLM5 Homeobox-leucine zipper protein HAT41.82e-3973.53Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        +DRTSETGRSLLR I+VNRM PSTADCEEEA MS P+ST SSV GK  E EMN ED+DGD ACSR ISDE+DG T RK+ RLT+DQSAVL+ES +EH++L
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NP
        NP
Subjt:  NP

A0A6J1E9Y0 homeobox-leucine zipper protein HAT41.04e-3568.63Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        +DRTSETGRSLLR I+VNR+ PSTADCEEEA MS P+ST SSV GK  E E N ED+DGD  C R ISDE+DG T RK+ RLT+DQSAVL++S +EH++L
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NP
        NP
Subjt:  NP

SwissProt top hitse value%identityAlignment
P46600 Homeobox-leucine zipper protein HAT14.4e-1042.99Show/hide
Query:  RSLLRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHEM---------NDEDVDGDGACSRRISDEKD---GGTCRKRFRLTEDQSAVLKESSE
        +  LR I+VN + P+T D EEE  +S P+ST  S+V GK    E          +D D+  D + SR  SDE++   G TCRK+ RL++DQSAVL+++ +
Subjt:  RSLLRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHEM---------NDEDVDGDGACSRRISDEKD---GGTCRKRFRLTEDQSAVLKESSE

Query:  EHDSLNP
        EH++LNP
Subjt:  EHDSLNP

P46601 Homeobox-leucine zipper protein HAT26.3e-0943.27Show/hide
Query:  LRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHE----------MNDEDVDGDGACSRRISD-EKDGG-TCRKRFRLTEDQSAVLKESSEEHD
        LR I+VN   PST +CEE+  +S P+ST  S++ GK  E E           + +++  D   SR  SD E+DGG T RK+ RL++DQSA L+E+ +EH+
Subjt:  LRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHE----------MNDEDVDGDGACSRRISD-EKDGG-TCRKRFRLTEDQSAVLKESSEEHD

Query:  SLNP
        +LNP
Subjt:  SLNP

Q05466 Homeobox-leucine zipper protein HAT42.3e-1140.15Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADC-EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDS
        +D + +  R+ +R I+VNR  PSTA+  +E+A +S P+ST SS  GK  E E   ED D  G  SR ISD++DG   RK+ RL++DQSA+L+E+ ++H +
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADC-EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDS

Query:  LNPH----LSHEALNRNIERKDWQNRKRAKSE
        LNP     L+ +   R  + + W   +RA+++
Subjt:  LNPH----LSHEALNRNIERKDWQNRKRAKSE

Q40691 Homeobox-leucine zipper protein HOX14.2e-0533.33Show/hide
Query:  LRSIEVNR-----------MAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        LR I+VNR             PS ++ +EE   S P+ST SS+ GK               A +    DE  GG  RK+ RL++DQ+AVL+++ +EH++L
Subjt:  LRSIEVNR-----------MAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NPHLSHEALNRNIERKD-----WQNRKRAKSE
        NP     AL R +  K      W   +RA+++
Subjt:  NPHLSHEALNRNIERKD-----WQNRKRAKSE

Q7XC54 Homeobox-leucine zipper protein HOX14.2e-0533.33Show/hide
Query:  LRSIEVNR-----------MAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL
        LR I+VNR             PS ++ +EE   S P+ST SS+ GK               A +    DE  GG  RK+ RL++DQ+AVL+++ +EH++L
Subjt:  LRSIEVNR-----------MAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDSL

Query:  NPHLSHEALNRNIERKD-----WQNRKRAKSE
        NP     AL R +  K      W   +RA+++
Subjt:  NPHLSHEALNRNIERKD-----WQNRKRAKSE

Arabidopsis top hitse value%identityAlignment
AT2G44910.1 homeobox-leucine zipper protein 47.9e-0736.11Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTA--DCEEEAR-MSKPSSTGSSVYGKWIEHEM---NDEDVDGDGACSR----RISDEKDGGT---CRKRFRLTEDQS
        A+R S+ G S LR   VNR   S A  D EEEA  +S P+S  SS+ G   +  +    DE+     +CSR      SD++DGG     RK+ RL++DQ+
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTA--DCEEEAR-MSKPSSTGSSVYGKWIEHEM---NDEDVDGDGACSR----RISDEKDGGT---CRKRFRLTEDQS

Query:  AVLKESSEEHDSLNPH----LSHEALNRNIERKDWQNRKRAKSE
         VL+E+ +EH +LNP     L+ +   R  + + W   +RA+++
Subjt:  AVLKESSEEHDSLNPH----LSHEALNRNIERKDWQNRKRAKSE

AT3G60390.1 homeobox-leucine zipper protein 33.9e-0634.21Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPST--ADCEEE-ARMSKPSSTGSSVY-GKWIEHEM------------NDEDVDGDGACSRRISDEKDGG-----TCRKR
        ++R S+  RS LR I+VNR APST   D E+E A +S P+ST SSV  GK  E E+             D +++         SD++DG      + RK+
Subjt:  ADRTSETGRSLLRSIEVNRMAPST--ADCEEE-ARMSKPSSTGSSVY-GKWIEHEM------------NDEDVDGDGACSRRISDEKDGG-----TCRKR

Query:  FRLTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERKDWQNRKRAKSE
         RL+++Q+ VL+E+ +EH +LNP     L+ +   R  + + W   +RA+++
Subjt:  FRLTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERKDWQNRKRAKSE

AT4G16780.1 homeobox protein 21.6e-1240.15Show/hide
Query:  ADRTSETGRSLLRSIEVNRMAPSTADC-EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDS
        +D + +  R+ +R I+VNR  PSTA+  +E+A +S P+ST SS  GK  E E   ED D  G  SR ISD++DG   RK+ RL++DQSA+L+E+ ++H +
Subjt:  ADRTSETGRSLLRSIEVNRMAPSTADC-EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEHDS

Query:  LNPH----LSHEALNRNIERKDWQNRKRAKSE
        LNP     L+ +   R  + + W   +RA+++
Subjt:  LNPH----LSHEALNRNIERKDWQNRKRAKSE

AT4G17460.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein3.1e-1142.99Show/hide
Query:  RSLLRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHEM---------NDEDVDGDGACSRRISDEKD---GGTCRKRFRLTEDQSAVLKESSE
        +  LR I+VN + P+T D EEE  +S P+ST  S+V GK    E          +D D+  D + SR  SDE++   G TCRK+ RL++DQSAVL+++ +
Subjt:  RSLLRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHEM---------NDEDVDGDGACSRRISDEKD---GGTCRKRFRLTEDQSAVLKESSE

Query:  EHDSLNP
        EH++LNP
Subjt:  EHDSLNP

AT5G47370.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein4.5e-1043.27Show/hide
Query:  LRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHE----------MNDEDVDGDGACSRRISD-EKDGG-TCRKRFRLTEDQSAVLKESSEEHD
        LR I+VN   PST +CEE+  +S P+ST  S++ GK  E E           + +++  D   SR  SD E+DGG T RK+ RL++DQSA L+E+ +EH+
Subjt:  LRSIEVNRMAPSTADCEEEARMSKPSST-GSSVYGKWIEHE----------MNDEDVDGDGACSRRISD-EKDGG-TCRKRFRLTEDQSAVLKESSEEHD

Query:  SLNP
        +LNP
Subjt:  SLNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAGGTGTTGAACTTTTTGCTGATCGGACATCGGAAACAGGGAGATCGCTTCTCAGAAGCATCGAAGTGAATCGGATGGCGCCGTCGACGGCGGATTGT
GAAGAGGAGGCGAGGATGTCGAAGCCTAGCAGTACGGGGTCGAGTGTGTATGGGAAATGGATTGAACATGAGATGAACGATGAAGATGTGGATGGGGATGGAGCT
TGTTCGAGAAGGATTAGTGATGAAAAAGATGGTGGAACTTGTAGAAAAAGGTTTCGGCTTACTGAAGATCAGTCGGCCGTTTTGAAAGAAAGCTCTGAAGAACAT
GATAGTCTCAATCCCCATCTGTCACATGAAGCCCTTAATCGAAACATAGAGAGGAAGGATTGGCAAAATCGAAAAAGAGCAAAATCGGAGCGGCAAGACATCATC
GGAGTGGCAAGGGGAAGTCGAACATCTAATTGTTACAGCAAAGCCCTTAATCAAAACATAGAGAGGAAGGATTTGGTTTCGGAGGCAACGGGTGTGACTAACGGG
CCAATGAAACCACAGAGACGAAGAGATCCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAGGTGTTGAACTTTTTGCTGATCGGACATCGGAAACAGGGAGATCGCTTCTCAGAAGCATCGAAGTGAATCGGATGGCGCCGTCGACGGCGGATTGT
GAAGAGGAGGCGAGGATGTCGAAGCCTAGCAGTACGGGGTCGAGTGTGTATGGGAAATGGATTGAACATGAGATGAACGATGAAGATGTGGATGGGGATGGAGCT
TGTTCGAGAAGGATTAGTGATGAAAAAGATGGTGGAACTTGTAGAAAAAGGTTTCGGCTTACTGAAGATCAGTCGGCCGTTTTGAAAGAAAGCTCTGAAGAACAT
GATAGTCTCAATCCCCATCTGTCACATGAAGCCCTTAATCGAAACATAGAGAGGAAGGATTGGCAAAATCGAAAAAGAGCAAAATCGGAGCGGCAAGACATCATC
GGAGTGGCAAGGGGAAGTCGAACATCTAATTGTTACAGCAAAGCCCTTAATCAAAACATAGAGAGGAAGGATTTGGTTTCGGAGGCAACGGGTGTGACTAACGGG
CCAATGAAACCACAGAGACGAAGAGATCCGTTTTAG
Protein sequenceShow/hide protein sequence
MESGVELFADRTSETGRSLLRSIEVNRMAPSTADCEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRLTEDQSAVLKESSEEH
DSLNPHLSHEALNRNIERKDWQNRKRAKSERQDIIGVARGSRTSNCYSKALNQNIERKDLVSEATGVTNGPMKPQRRRDPF