; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G002530 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G002530
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome locationGy14Chr3:1976954..1981907
RNA-Seq ExpressionCsGy3G002530
SyntenyCsGy3G002530
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041077.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.31e-5377.52Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLAR----------------------------SPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLAR                            SPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLAR----------------------------SPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]3.66e-61100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]6.09e-6099.01Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]7.69e-5491.09Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSFR  VRT S  KS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]2.04e-5895.05Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTN+SAKSSSSPFPLP+KSTAPSVRRFSLARSPSELGC+QSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCT PG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0L1I6 Uncharacterized protein8.75e-52100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X12.95e-6099.01Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

A0A1S3BL94 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X21.37e-5198.9Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A5A7THI0 Protein NUCLEAR FUSION DEFECTIVE 66.34e-5477.52Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLAR----------------------------SPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLAR                            SPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLAR----------------------------SPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X13.72e-5491.09Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSFR  VRT S  KS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial1.6e-0639.6Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MAS C R  S+ + S+FR+ +   S    S+S F        PS      +R   +LG +QSLLP + AVA AR+ SCL  +S++ R+L+QG+LC  +PG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein7.3e-2359.22Show/hide
Query:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS
        MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQG LCCTS
Subjt:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS

Query:  PGL
        P L
Subjt:  PGL

AT4G17310.2 unknown protein9.3e-1856.99Show/hide
Query:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein1.0e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.6 unknown protein1.0e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.7 unknown protein1.0e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAGTCCTCATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACC
TTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
TATCTAAAACCCTCAACCCTTCGGTTCAATCGTTTCTTGTAGAATTTCCAGATCTCCGTTCTTCTTTCATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAG
TCCTCATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACCTTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGC
CAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTG
CGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAACATGAAATATTATGCTTTCTTTTGAAGTGTGAGTAGCTTTTTTATGCATTAATCTACAGACTTTCC
CTTTTTATTGCTCTACAATTTGTTTGTCTGTGTCCTTTTTGTGTTGGTATTTGCTGATTCTTGTTGTCTCTGTCATTGTTGTGTTGTTCCAAAAATCTTGCAGCTTCTGT
ATGAAGTGGAACATTCTGTTAAAATTGGTGAAATTTAAGTTTAGAAGTCTAGAATATTGGATCGTTGCTTATACTTAAGGAGGTTGGTGGCAAAATTATGTAAAAGATGG
GAGGATAAGCTAGAACGTTGAAGTCAACCATCTTGGGGAGAGAAACCATCTTAGATTTGGTCCTCTCCCTTGCCTTCGGTATCTAGTTTCGTTGTTTATTGGTTTCAACT
TTTGTCCCCCAGTTAAATTGGTCATTTTCTTTAGTAAGGTTAGTTATTAGAACTGGAATGGAATGAATGGGATGGGTTTGGTTGTTGACTGGGGACCTTGAAACTGACTA
GAGTATTTGGTTCCTGCAGGCACATAATATCAATTGTCAATATGCTTGAAAGAAATAGATTGGAAGTTTACGGAGCATCAGATTATGGTGCAGTGAATCCATTTCAAATG
CAATTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGAGTTAGGTTTATCCGTTCCAAGGTGACTTTTTCCGGCAAATTGTTGCAGTGACAAGGAGATATCAGTAATG
GTTTAGAGGATTTCTTTTATGAACTGTGCCGAATACTGCTCAATTTGGTTAACTAATTTTGATTCATCCAAACAACAGATTGTGTTGAAATAAGAATATAGTGATTCTAG
TTCTCATGGCAACTCAGGAAATCATACTTTTGCCATTGTTGTGGGTTATAAATGTTTGATCCTTTTCATACATTCAATATGTACGTTTGTTATTTATTAAGATACACATC
ATATTATTTTCTTGCCTTTTGGTATATTATGAAGACAAATTGGATCTTTTTTGCGTACTTCTTAGACAACTAAGAAAATGAGGCCTGCCATGTTTTGTACTATAACTTAA
GATATTTGATGGGGTTTGTTGGAAATGATCTTGTATAAGAGATCAGTTTAGCTTGTCGGTCGTCATAGGTACTTGATTGTCAAAGGCTGAAAGAAATTTTTTAGTTCTGT
TCTATTGACCTAACGTGTTGAACTAACAAGATATCATGGTCTTAGCTTGTCCATCAATATCAAAGTTTTAAAGAAAATTTCTAAATTTAGTTATGTTCTATTGGACCCAA
CATGTTGAACTCAGAAAAACCTTAGTTGTGGTTATTGTTCACCTAGTTTATGCATATATCCTTTCAAAAGAGATCAAAGGTGCAAAGAAAAATCTTAGCTTTGTTGTGCT
AACTTCACATGTTGAACTCAAAGAAAAATCTTAGCTTTGTTGTGCTAACTTCACATGTTGAACTCAAAGAAAAATCTTAG
Protein sequenceShow/hide protein sequence
MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL