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CsGy3G003190 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G003190
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionacidic leucine-rich nuclear phosphoprotein 32 family member B-like
Genome locationGy14Chr3:2594591..2595163
RNA-Seq ExpressionCsGy3G003190
SyntenyCsGy3G003190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650077.1 hypothetical protein Csa_010314 [Cucumis sativus]1.45e-121100Show/hide
Query:  MGMRIMLGLIPILVVMVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD
        MGMRIMLGLIPILVVMVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD
Subjt:  MGMRIMLGLIPILVVMVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD

Query:  VNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        VNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
Subjt:  VNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

KAG7028360.1 RNA polymerase II transcription factor B subunit 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.28e-2547.4Show/hide
Query:  MGMRIMLGLIPILV----------VMVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNK-PHHQDTEFH
        MGMRIM+GL+ ++           V+VLLVTSKSSQFFL   L GSPHF+FSIFNSIILLI +  H  P     + I +    +  YH      Q  EF 
Subjt:  MGMRIMLGLIPILV----------VMVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNK-PHHQDTEFH

Query:  DDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQ
          + D   ED+           N+NEK+D+  D DE ++ DE++ + D+ +E    DEE+ D+ELE RIEEFIAKVNKRWREEKL+D+LL Q
Subjt:  DDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQ

TYK19467.1 hypothetical protein E5676_scaffold443G001210 [Cucumis melo var. makuwa]9.15e-5878.91Show/hide
Query:  MRNHEEPQ-PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD-VNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWD
        MRNHEEPQ PHEQF+IM+  LIL+LSPYHNKPHHQDT        +  +DDDGD  NTDDQYDNRNEKEDK +SD EDEMKEWDEKEGE+DEY EAE WD
Subjt:  MRNHEEPQ-PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD-VNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWD

Query:  EEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        EEEEDEELE RIEEFIAKVNKRWREEKLRDHLLIQICSTN ++N SN
Subjt:  EEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

XP_023005569.1 acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucurbita maxima]6.98e-2746.91Show/hide
Query:  MGMRIMLGLIPILVV-----MVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNK-PHHQDTEFH--DDH
        MGMRIM+GL+ ++       +VLL TSKSSQ FL   L GSPHF+FSIFNSIILLI +  H  P     + I +    L  Y       Q+ EF+  DD 
Subjt:  MGMRIMLGLIPILVV-----MVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNK-PHHQDTEFH--DDH

Query:  KDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN
         D   E +D   N  D+ +  NE        DE ++ DE++ + D+ D+ E  DE++ D+ELE RIEEFIAKVNKRWREEKLRD+L  Q CS+N
Subjt:  KDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN

XP_038876855.1 glutamic acid-rich protein-like [Benincasa hispida]2.13e-6371.28Show/hide
Query:  MGMRIMLGLIPILVVMVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFH--DDHKDKRVE
        MGMRIM+GL+PILVVM+L VTSKSSQ FL   LF SPH IFSIFNSIILLITMRNHE P P EQF+IMEL LQLSPYH KPH QD EF   D  +D R E
Subjt:  MGMRIMLGLIPILVVMVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFH--DDHKDKRVE

Query:  DDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        D+D D N   +Y N+NEKED+ +DEDE+K+ +EKE ED++ D  E  DEEE DEELE RIEEFIAKVNKRWREEKLRDHLLIQICS NNV++ SN
Subjt:  DDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

TrEMBL top hitse value%identityAlignment
A0A0A0L728 Uncharacterized protein5.33e-90100Show/hide
Query:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE
        MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE
Subjt:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE

Query:  ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
Subjt:  ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

A0A5D3D7D0 Uncharacterized protein4.43e-5878.91Show/hide
Query:  MRNHEEPQ-PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD-VNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWD
        MRNHEEPQ PHEQF+IM+  LIL+LSPYHNKPHHQDT        +  +DDDGD  NTDDQYDNRNEKEDK +SD EDEMKEWDEKEGE+DEY EAE WD
Subjt:  MRNHEEPQ-PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGD-VNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWD

Query:  EEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        EEEEDEELE RIEEFIAKVNKRWREEKLRDHLLIQICSTN ++N SN
Subjt:  EEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

A0A6J1E6C0 nucleolin-like3.68e-0737.79Show/hide
Query:  MLGLIPILVVMVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTD-
        M+GL+PILVV+VLL  S +     LFGSP+ IFSIFN +ILL+T+RNHE             +LQ S YH     QD EF    +D+   +DD D N D 
Subjt:  MLGLIPILVVMVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTD-

Query:  ----------DQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEY-------------DEAEGWDEEEEDEELEM
                  D+ +  NE++++ +D D   E ++++G++ E              DE E WD+EEE+EE E+
Subjt:  ----------DQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEY-------------DEAEGWDEEEEDEELEM

A0A6J1KZL9 acidic leucine-rich nuclear phosphoprotein 32 family member B-like3.38e-2746.91Show/hide
Query:  MGMRIMLGLIPILVV-----MVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNK-PHHQDTEFH--DDH
        MGMRIM+GL+ ++       +VLL TSKSSQ FL   L GSPHF+FSIFNSIILLI +  H  P     + I +    L  Y       Q+ EF+  DD 
Subjt:  MGMRIMLGLIPILVV-----MVLLVTSKSSQFFL---LFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNK-PHHQDTEFH--DDH

Query:  KDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN
         D   E +D   N  D+ +  NE        DE ++ DE++ + D+ D+ E  DE++ D+ELE RIEEFIAKVNKRWREEKLRD+L  Q CS+N
Subjt:  KDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN

B9RBU5 Uncharacterized protein1.19e-0639.76Show/hide
Query:  MVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKED
        +V L+ S ++   L F SP F+FS+FN+IIL I + ++      ++ D      Q S Y NK +  D +F DD+    V+DDD D       D+R  KED
Subjt:  MVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKED

Query:  KVSDEDEMKEWDEKEGEDDEYDEAEGW---DEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQ
          SD     E D+  G D E     GW   D EE D     RIE+FIAKVNK WREE L +H+  Q
Subjt:  KVSDEDEMKEWDEKEGEDDEYDEAEGW---DEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGAGGATTATGTTGGGGTTAATACCAATTTTGGTGGTGATGGTTTTGTTGGTAACATCAAAATCATCTCAATTTTTTCTACTTTTTGGTAGTCCTCATTTCAT
TTTCTCAATCTTCAACTCCATAATTCTTCTCATAACTATGAGAAACCATGAGGAGCCACAACCTCATGAACAATTTGATATAATGGAACTTATTCTTCAATTATCTCCCT
ATCATAATAAGCCCCATCATCAAGATACTGAATTTCATGACGATCACAAAGATAAAAGAGTAGAAGACGATGATGGAGATGTAAACACCGACGATCAATATGACAACCGA
AATGAGAAAGAAGACAAGGTCAGTGATGAAGATGAAATGAAGGAATGGGATGAGAAAGAAGGTGAAGATGATGAATATGATGAGGCCGAGGGGTGGGACGAGGAAGAAGA
AGATGAAGAGTTGGAGATGAGGATTGAAGAGTTCATAGCAAAGGTGAACAAGAGATGGAGAGAAGAGAAGTTAAGGGACCATTTGCTTATTCAAATTTGTTCTACTAATA
ATGTTACTAATATCTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGAGGATTATGTTGGGGTTAATACCAATTTTGGTGGTGATGGTTTTGTTGGTAACATCAAAATCATCTCAATTTTTTCTACTTTTTGGTAGTCCTCATTTCAT
TTTCTCAATCTTCAACTCCATAATTCTTCTCATAACTATGAGAAACCATGAGGAGCCACAACCTCATGAACAATTTGATATAATGGAACTTATTCTTCAATTATCTCCCT
ATCATAATAAGCCCCATCATCAAGATACTGAATTTCATGACGATCACAAAGATAAAAGAGTAGAAGACGATGATGGAGATGTAAACACCGACGATCAATATGACAACCGA
AATGAGAAAGAAGACAAGGTCAGTGATGAAGATGAAATGAAGGAATGGGATGAGAAAGAAGGTGAAGATGATGAATATGATGAGGCCGAGGGGTGGGACGAGGAAGAAGA
AGATGAAGAGTTGGAGATGAGGATTGAAGAGTTCATAGCAAAGGTGAACAAGAGATGGAGAGAAGAGAAGTTAAGGGACCATTTGCTTATTCAAATTTGTTCTACTAATA
ATGTTACTAATATCTCAAATTAA
Protein sequenceShow/hide protein sequence
MGMRIMLGLIPILVVMVLLVTSKSSQFFLLFGSPHFIFSIFNSIILLITMRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNR
NEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN