CuGenDBv2

Gene ID	CsGy3G004090
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	vegetative cell wall protein gp1-like
Genome location	Gy14Chr3:3340330..3340908
RNA-Seq Expression	CsGy3G004090
Synteny	CsGy3G004090
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0065729.1 extensin-like [Cucumis melo var. makuwa]

3.86e-104

90.1

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        M  FALF T+LF  SPFIGLVFA DSPAASPKPPKT HSPSPAHSPVVSPPS ++SPSKSP ASPP++TP ISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        P+SSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPT+LAPETAERPGNDASASG+YKIGVEV+LSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_011652729.1 extensin [Cucumis sativus]

2.69e-118

100

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_022932347.1 gibberellin-regulated protein 14-like [Cucurbita moschata]

7.09e-79

72.28

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-
        M KFALF T+L LFS F  +V   DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  SP +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-

Query:  -----SPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
             SP+ SPPSPLP DASPV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+IG EVILSGLSIWA W
Subjt:  -----SPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

XP_023552940.1 gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]

5.07e-78

72.73

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        M KF LF T+L LFS F  +VF  DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  SP +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLS--SPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
         +S  SPPSPLP DASPV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+IG EVILSGLS+WA WAF
Subjt:  PLS--SPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_038904208.1 calphotin-like [Benincasa hispida]

2.50e-86

78.22

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP----
        M KFALF T+L LFSPF G+VF  DSPAA+PKP KT HSPSPAHSPVVSPPS + SP K P ASPP +TP ISPA ATPPSVAP KAPA+ P+SSP    
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP----

Query:  --SENSPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
          SE SP+SSPPSP P DASPV    G PVEPEIPANPISGG+PVGTPSIFPSSSSPPM+TP SLAPETAERPGNDASASGK KIGVEVILSGLSIWAAW
Subjt:  --SENSPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L269 Lipid binding protein

1.30e-118

100

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

A0A5A7VJY8 Extensin-like

1.87e-104

90.1

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        M  FALF T+LF  SPFIGLVFA DSPAASPKPPKT HSPSPAHSPVVSPPS ++SPSKSP ASPP++TP ISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        P+SSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPT+LAPETAERPGNDASASG+YKIGVEV+LSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

A0A6J1DWL9 classical arabinogalactan protein 4-like

5.45e-72

70.5

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Query:  ITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP------SENSP
        +T+L LF+PF G+V A D+PA SPKP KT HSP P HSP VS PSH+ SPSKSPAASPP  TP ISPAL+TPP+ +P +APAA P SSP      SE SP
Subjt:  ITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP------SENSP

Query:  LSSPPSPLPFDASPV--------GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASG-KYKIGVEVILSGLSIWAAWAF
        +SSPPSP P  ASPV        G+P EPEIPANPI+GGSPV TPSIFPSSSSPPM++P SLAPETAERPGNDASAS  KYKIG EVILSG+SIWAAWAF
Subjt:  LSSPPSPLPFDASPV--------GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASG-KYKIGVEVILSGLSIWAAWAF

A0A6J1EWE6 gibberellin-regulated protein 14-like

3.43e-79

72.28

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-
        M KFALF T+L LFS F  +V   DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  SP +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-

Query:  -----SPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
             SP+ SPPSPLP DASPV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+IG EVILSGLSIWA W
Subjt:  -----SPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

A0A6J1L107 gibberellin-regulated protein 14-like

1.25e-74

69.8

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Query:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-
        M  FALF T+L LFS F  +V A DS AA+PKP KT +SPSPAHSPV SPPSH+ SP  SP +SPP  TP ISP+L TPP V+P K PAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-

Query:  -----SPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
             SP+ SPPSPLP DASPV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DAS SGKY+IG EVILSGLSIWA W
Subjt:  -----SPLSSPPSPLPFDASPV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

SwissProt top hits

e value

%identity

Alignment

Q9SN46 Leucine-rich repeat extensin-like protein 5

9.7e-05

38.71

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Query:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE
        SP+ SP PP T+ SP    SP  SPPS ++ PS  P+ +P   +P  SP   T    PPS   +  P   P SSP+  +P  SPPS  P   SP G+P  
Subjt:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE

Query:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA
        P I P+ PI+  SP  TP+          P+ SSP  + PT   P T   PG ++
Subjt:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA

Arabidopsis top hits

e value

%identity

Alignment

AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

2.2e-04

35.67

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Query:  SPAASP---KPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVT------PVISPALATPP--SVAPSKAPAAVP--ISSPSENSPLSSPPSPLPFD
        SP A+P    PP T  +P PA  PV +PP  T   +K P A+PP  T      PV  P +ATPP  +  P+K P A+P   + P    P+++PP+  P  
Subjt:  SPAASP---KPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVT------PVISPALATPP--SVAPSKAPAAVP--ISSPSENSPLSSPPSPLPFD

Query:  ASPVGAPVEPEIPANPISGGSPVGTPSI------FPSSSSPPMATPTSLAPETAERP
        A+P   P+       P +   PV TP I       P +++PP+A P    P TA+ P
Subjt:  ASPVGAPVEPEIPANPISGGSPVGTPSI------FPSSSSPPMATPTSLAPETAERP

AT4G18670.1 Leucine-rich repeat (LRR) family protein

6.9e-06

38.71

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Query:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE
        SP+ SP PP T+ SP    SP  SPPS ++ PS  P+ +P   +P  SP   T    PPS   +  P   P SSP+  +P  SPPS  P   SP G+P  
Subjt:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE

Query:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA
        P I P+ PI+  SP  TP+          P+ SSP  + PT   P T   PG ++
Subjt:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA

Sequences

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CDS sequence

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ATGGCCAAGTTTGCTTTGTTTATTACTCTTCTCTTTTTGTTTTCGCCATTTATTGGCCTCGTTTTCGCTAACGATTCCCCTGCCGCCTCCCCAAAACCTCCTAAAACGCT
TCATTCTCCTTCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCACACTGTATCTCCGTCTAAATCTCCGGCTGCTTCTCCACCGGTCGTAACTCCGGTAATTTCTC
CGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGCTTTCGTCGCCGCCGTCTCCTCTCCCT
TTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATCCCGGCAAATCCGATTTCTGGAGGGTCTCCCGTGGGGACGCCGTCGATATTTCCGTCGAGCAGTAGCCC
ACCGATGGCTACTCCGACAAGCTTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTGGGC
TTTCTATTTGGGCTGCTTGGGCCTTTTGA

mRNA sequence

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Protein sequence

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MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLP
FDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

CsGy3G004090 (gene) of Cucumber (Gy14) v2.1 genome