; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G004545 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G004545
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPectin lyase-like superfamily protein, putative
Genome locationGy14Chr3:3647963..3649403
RNA-Seq ExpressionCsGy3G004545
SyntenyCsGy3G004545
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065793.1 exopolygalacturonase-like [Cucumis melo var. makuwa]2.07e-19089.12Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        M FGAKPDAITDNSKALS+AWSEACTNNGGG+VLIPA GRFLVLPLLLQGPCHGFI IQLDGELLAPL+E+  TGDYWLSID+VNNLFIDGLG L+GRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWPS SHNRP+SM+L GINNARI+NIKSYNSKLFHFA+HGCRDVTFDHVTVIAPANSPNTDGIH+S SSGINIMHSTIGTGDDCISLGPGSKFINITN+
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+GT+NG RIKTWSSSYS+MVSK+TFLNLQMNNVKNPIIIDQ+YCP SCG  +M
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

XP_016900599.1 PREDICTED: exopolygalacturonase-like [Cucumis melo]1.45e-19089.47Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        M FGAKPDAITDNSKALS+AWSEACTNNGGG+VLIPA GRFLVLPLLLQGPCHGFI IQLDGELLAPL+E+  TGDYWLSID+VNNLFIDGLG L+GRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWPS SHNRP+SM+L GINNARI+NIKSYNSKLFHFA+HGCRDVTFDHVTVIAPANSPNTDGIH+S SSGINIMHSTIGTGDDCISLGPGSKFINITN+
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+GT+NG RIKTWSSSYS+MVSKVTFLNLQMNNVKNPIIIDQ+YCP SCG  +M
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

XP_031738767.1 exopolygalacturonase [Cucumis sativus]1.32e-21299.65Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMV
        QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM+
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMV

XP_038904214.1 exopolygalacturonase-like [Benincasa hispida]8.82e-17984.56Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        M FGAKPDAITDNSKALS+AWSEAC N+GGG+VLIPA+GRFLVLPLLLQGPCHGFI IQLDGELLAP+++ FATGDYWLSI+QVNNLFIDGLG L+GRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWP +S +RPVSM+L  IN ARI NIKSYNSKLFHFA+HGC +V FDHVTVIAP +SPNTDGIHISSSSGINIMHS I TGDDCISLGPGSKFINITNI
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        QCGPGHGISIGSLGKYPNEEDVFEVT+RDS FIGTSNGVRIK+WSSSYSS+VSKV++ NLQMNNVKNPI+IDQ YCP SCG  +M
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

XP_038904218.1 exopolygalacturonase-like [Benincasa hispida]1.44e-17186.3Show/hide
Query:  ALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMR
        ALS AWSEAC NNGGG+VLIPA GRFLVLPLLLQGPCHGFIRIQ DGELLAP D HFATG+YWLSI+QVNNLFIDGLG L+GRGSTAW   S NRP+SM+
Subjt:  ALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMR

Query:  LNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGK
        LN IN ARI NIKSYNSKLFHFAMHGC DVTFDHVT+IAPANSPNTDGIHISSSSGINIMHS IGTGDDCISLGPGSKFINITN++CGPGHGISIGSLGK
Subjt:  LNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGK

Query:  YPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        YPNEED+FEVTVRDSTFIGTSNGVRIK+W SSYSSMVSKVT++NLQMNNVKNP+ IDQ YCP SCG   M
Subjt:  YPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

TrEMBL top hitse value%identityAlignment
A0A0A0L7H9 Uncharacterized protein6.38e-21399.65Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMV
        QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM+
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMV

A0A1S4DX91 exopolygalacturonase-like7.04e-19189.47Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        M FGAKPDAITDNSKALS+AWSEACTNNGGG+VLIPA GRFLVLPLLLQGPCHGFI IQLDGELLAPL+E+  TGDYWLSID+VNNLFIDGLG L+GRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWPS SHNRP+SM+L GINNARI+NIKSYNSKLFHFA+HGCRDVTFDHVTVIAPANSPNTDGIH+S SSGINIMHSTIGTGDDCISLGPGSKFINITN+
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+GT+NG RIKTWSSSYS+MVSKVTFLNLQMNNVKNPIIIDQ+YCP SCG  +M
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

A0A5D3B9J1 Exopolygalacturonase-like1.00e-19089.12Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        M FGAKPDAITDNSKALS+AWSEACTNNGGG+VLIPA GRFLVLPLLLQGPCHGFI IQLDGELLAPL+E+  TGDYWLSID+VNNLFIDGLG L+GRGS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        TAWPS SHNRP+SM+L GINNARI+NIKSYNSKLFHFA+HGCRDVTFDHVTVIAPANSPNTDGIH+S SSGINIMHSTIGTGDDCISLGPGSKFINITN+
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+GT+NG RIKTWSSSYS+MVSK+TFLNLQMNNVKNPIIIDQ+YCP SCG  +M
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

A0A5D3BB58 Exopolygalacturonase-like6.15e-16582.25Show/hide
Query:  ALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPV---
        ALSSAWS AC NNGGG+VLIPA+GRFLVLPLLLQGPCHG IRIQLDGELLAP D+ FATGDYWLSI  VNNLFIDGLG L G GS+AWPS S NRP+   
Subjt:  ALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPV---

Query:  ---SMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGIS
           SM+LN IN A I NI SY+SKLFHFA+HG RDVTFDHVTV+AP +SPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSK INITN+ CGPGHGIS
Subjt:  ---SMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGIS

Query:  IGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        IGSLGKYPNEE+VFEVTVRDSTF+GT+NG RIK+WSSSYSSMVSKVTF+NLQMNNVKNPIIIDQ+YCP SCG  +M
Subjt:  IGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

A0A6J1F153 exopolygalacturonase-like1.47e-14972.28Show/hide
Query:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS
        + FGA  D  T+++KALS AW EAC +NG G+VL+PA GRFL+LPL+L+GPC   I + + GELLAP+ ++FATG YWLSI +V+NLF+DG GSL+G GS
Subjt:  MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGS

Query:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI
        +AWPS + NRPVSM+L+ +N ARI+ I S NSK FHF +HGCRDVTFDHVTVIAPA+SPNTDGIH+S SSGINIMHS I TGDDCISLGPGSKFINIT+I
Subjt:  TAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNI

Query:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM
        QCGPGHGISIGSLGKYPNEEDV EVT+RDSTF+GT NGVRIKTWSSS+SS VSK+ FLNL+M +VKNPIIIDQ YCP  C   KM
Subjt:  QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKM

SwissProt top hitse value%identityAlignment
P26216 Exopolygalacturonase2.3e-6645.94Show/hide
Query:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        GA  +  TD++KA+  AW+ AC   G   +LIP KG FLV  L   GPC G + IQ+DG LLA  D   +     W+ I +V+NL I G G+LDG+G   
Subjt:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        W   S  +       P S+ ++ +NN  ++ +   NSK FH  M+ C+D+    VTV AP +SPNTDGIH+  SSGI I ++ IG GDDCIS+GPG+  +
Subjt:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP
        NIT + CGPGHGISIGSLG+Y +E+DV ++ V+D T   T  GVRIK +  + S + VSK+ + N++M +  NPI ID  YCP
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP

P35338 Exopolygalacturonase8.6e-6645.58Show/hide
Query:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        GA  +  TD++KA+  AW+ AC   G   +LIP KG FLV  L   GPC G + IQ+DG LLA  D   +     W+ I +V+NL I G G+LDG+G   
Subjt:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        W   S  +       P S+ ++ +NN  ++ +   NSK FH  M+ C+++    VTV AP +SPNTDGIH+  SSGI I ++ IG GDDCIS+GPG+  +
Subjt:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP
        NIT + CGPGHGISIGSLG+Y +E+DV ++ V+D T   T  GVRIK +  + S + VSK+ + N++M +  NPI ID  YCP
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP

P35339 Exopolygalacturonase6.6e-6645.58Show/hide
Query:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        GA  +  TD++KA+  AW+ AC   G   +LIP KG FLV PL   GPC G + IQ++G LLA  D   +     W+ I +V+NL I G G LDG+G   
Subjt:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        W   S  +       P S+ ++ +NN  ++ I   NSK FH  M+ C+D+    V V AP +SPNTDGIH+  SSG+ I ++ IG GDDCIS+GPG+  +
Subjt:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP
        NIT + CGPGHGISIGSLG+Y +E+DV ++ V+D T   T+NGVRIK +  + S +  SK+ + N++M +   PIIID  YCP
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP

Q39766 Polygalacturonase6.2e-6445.74Show/hide
Query:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        FGAK D  TD SK    AW EAC +     V+IP KG +L+  + L+GPC   I I + G + AP D        W+    V N  + G G  DG+GS A
Subjt:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  W-PSTSHNR------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        +  +T  NR      PV++R + + NA I +I S +SKLFH  +  C+++T + + + AP  SPNTDGIH+  S G+NI+ S I TGDDCIS+G G+K +
Subjt:  W-PSTSHNR------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP
         I  I CGPGHGISIGSLGK+ NEE V  + + + T   TSNG RIKTW   +   VS++ F ++ MNNV +PI+IDQ YCP
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP

Q6H9K0 Exopolygalacturonase (Fragment)1.5e-7046.74Show/hide
Query:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGF-IRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGST
        +GAK     D S+A+  AW  AC + G   VLIP KG + +  + +QGPC G  I  Q+DG + AP D      D W+S  +++ L + G G+LDG+G T
Subjt:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGF-IRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGST

Query:  AW--------PSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSK
        AW        P+  H   +++R + + +A + +I S NSK+FH  +  C D+TF HVTV AP  S NTDGIH+  S G+ I ++ I TGDDCIS+GPGS+
Subjt:  AW--------PSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSK

Query:  FINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP-GSCGSQ
         + IT + CGPGHGISIGSLG+Y NE++V  +TV+  TF GT NGVR+KTW +S     + +TF +L MNNV+NP+I+DQ YCP G C  Q
Subjt:  FINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP-GSCGSQ

Arabidopsis top hitse value%identityAlignment
AT1G43080.1 Pectin lyase-like superfamily protein9.8e-6544.52Show/hide
Query:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        +G++PD  TDN+ A +S W  ACT   G   +   KG F +  +   GPC   I   +DG LLAP +      D W++   +NNL I G G+LDG+G  +
Subjt:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        WP    ++        ++M    +NN+RI +I S NSK+ HF            VT+ AP +SPNTDGI + S S I+I ++ IGTGDDCI++  G+  +
Subjt:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSS-MVSKVTFLNLQMNNVKNPIIIDQNYCP
        +I+NI+CGPGHGIS+GSLGK  +E+DV  +TVRD+ F GTS+G+RIKTW SS S  +VS   + N+QM +V  PI IDQ YCP
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSS-MVSKVTFLNLQMNNVKNPIIIDQNYCP

AT1G43090.1 Pectin lyase-like superfamily protein9.8e-6544.17Show/hide
Query:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        +G++PD  TDN+ A +S W  ACT   G   +   KG F +  +   GPC   I   +DG LLAP +      D W++   +NNL I G G+LDG+G  +
Subjt:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        WP    ++        ++M    +NN+RI +I S NSK+ HF            VT+ AP +SPNTDGI + S S I+I ++ IGTGDDCI++  G+  +
Subjt:  WPSTSHNR-------PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP
        +I+N++CGPGHGIS+GSLGK  +E+DV  +TVRD+ F GTS+G+RIKTW SS S + VS   + N+QM +V  PI IDQ YCP
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSM-VSKVTFLNLQMNNVKNPIIIDQNYCP

AT2G26620.1 Pectin lyase-like superfamily protein1.3e-6445.74Show/hide
Query:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAW
        G+KPD  TDN+ A +S WS AC    G   +   KG F +  +   GPC   I   +DG LLAP + +    D W++   +NNL I G G+LDG+G  +W
Subjt:  GAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAW

Query:  P-STSHNRP------VSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFIN
        P +  H  P      +SM    +NN+ I +I S NSK+ HF            VT+ AP++SPNTDGI + S S I I ++ IGTGDDCI++  G+  +N
Subjt:  P-STSHNRP------VSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFIN

Query:  ITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSS-MVSKVTFLNLQMNNVKNPIIIDQNYCP
        I+NI CGPGHGIS+GSLGK  +E+DV ++ VRD  F GTS+G+RIKTW SS S  +VS   + N+QM +V  PI IDQ YCP
Subjt:  ITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSS-MVSKVTFLNLQMNNVKNPIIIDQNYCP

AT2G43890.1 Pectin lyase-like superfamily protein7.5e-6543.06Show/hide
Query:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGST
        FGAKPD  TD++KA   AW  AC +     V +P +G FL+ P+  +GPC   I  Q+ G ++AP D        YW+   +VN + I G G+LD RG++
Subjt:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLD-EHFATGDYWLSIDQVNNLFIDGLGSLDGRGST

Query:  AWPSTSHNR--PV---SMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFIN
         W      +  PV   SM  N  N+  ++ + S NS+  H  ++ C +V    V ++AP  SPNTDG+H+  S+G+ +   T  TGDDCIS+GPG++ + 
Subjt:  AWPSTSHNR--PV---SMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFIN

Query:  ITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQK
        ++ + CGPGHGISIGSLG+  NE  V  +T+ +S F G+ NGVRIKTW+   +  V  V F NL M NV+NPII+DQNYCP + G  K
Subjt:  ITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQK

AT4G18180.1 Pectin lyase-like superfamily protein9.8e-6543.51Show/hide
Query:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA
        FGA+ +   D++KA  +AW +AC ++   + LI  +G F V  L   GPC     + +  +    L + + +G  W+    +N L + G G+ DG+G+ A
Subjt:  FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTA

Query:  WP-------STSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI
        WP       S     P S++  G+N   +  I S NSK FH A+  CRD     + + AP++SPNTDGIHI  SS +    S I TGDDC+S+G G+  I
Subjt:  WP-------STSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFI

Query:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYS-SMVSKVTFLNLQMNNVKNPIIIDQNYCPGS
         IT+I+CGPGHGIS+GSLG+YPNE+DV  + V+D    GT+NG+RIKTW++S   S  + +TF N+ MNNV NPIIIDQ+YCP S
Subjt:  NITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYS-SMVSKVTFLNLQMNNVKNPIIIDQNYCPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTGGTGCCAAACCTGATGCAATAACGGATAATAGTAAGGCATTAAGTAGTGCATGGAGTGAAGCTTGTACAAATAACGGAGGTGGCATTGTTTTAATACCAGC
AAAAGGAAGGTTCTTGGTTTTGCCACTGCTTCTCCAAGGTCCATGCCATGGCTTCATTCGTATACAACTCGATGGTGAACTATTGGCTCCCCTCGACGAGCATTTCGCTA
CTGGTGACTATTGGCTTAGTATCGATCAAGTCAACAACCTTTTTATTGATGGTTTAGGTAGCTTGGACGGTCGCGGTTCTACCGCTTGGCCTTCCACCTCACATAATCGT
CCTGTCTCTATGAGACTCAATGGTATCAACAATGCAAGAATTACCAATATAAAATCCTACAATAGCAAGCTCTTCCATTTCGCTATGCATGGATGTCGTGATGTCACGTT
TGATCACGTTACAGTGATAGCTCCAGCAAACAGTCCCAATACAGATGGAATCCACATTTCATCATCAAGTGGTATCAACATCATGCATTCGACAATCGGTACTGGAGATG
ATTGCATCTCCTTGGGTCCTGGAAGCAAATTCATCAACATAACTAACATTCAATGTGGTCCTGGACATGGAATCAGCATTGGTAGCCTTGGAAAGTACCCAAACGAAGAA
GATGTCTTTGAAGTCACAGTAAGAGACTCCACATTCATTGGCACATCCAACGGTGTGAGGATCAAAACATGGTCGTCTTCGTATTCCAGCATGGTTAGCAAGGTCACATT
TCTCAATCTCCAAATGAACAATGTCAAAAATCCTATCATCATCGACCAAAATTATTGTCCAGGCTCTTGCGGTTCACAAAAAATGGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTTTGGTGCCAAACCTGATGCAATAACGGATAATAGTAAGGCATTAAGTAGTGCATGGAGTGAAGCTTGTACAAATAACGGAGGTGGCATTGTTTTAATACCAGC
AAAAGGAAGGTTCTTGGTTTTGCCACTGCTTCTCCAAGGTCCATGCCATGGCTTCATTCGTATACAACTCGATGGTGAACTATTGGCTCCCCTCGACGAGCATTTCGCTA
CTGGTGACTATTGGCTTAGTATCGATCAAGTCAACAACCTTTTTATTGATGGTTTAGGTAGCTTGGACGGTCGCGGTTCTACCGCTTGGCCTTCCACCTCACATAATCGT
CCTGTCTCTATGAGACTCAATGGTATCAACAATGCAAGAATTACCAATATAAAATCCTACAATAGCAAGCTCTTCCATTTCGCTATGCATGGATGTCGTGATGTCACGTT
TGATCACGTTACAGTGATAGCTCCAGCAAACAGTCCCAATACAGATGGAATCCACATTTCATCATCAAGTGGTATCAACATCATGCATTCGACAATCGGTACTGGAGATG
ATTGCATCTCCTTGGGTCCTGGAAGCAAATTCATCAACATAACTAACATTCAATGTGGTCCTGGACATGGAATCAGCATTGGTAGCCTTGGAAAGTACCCAAACGAAGAA
GATGTCTTTGAAGTCACAGTAAGAGACTCCACATTCATTGGCACATCCAACGGTGTGAGGATCAAAACATGGTCGTCTTCGTATTCCAGCATGGTTAGCAAGGTCACATT
TCTCAATCTCCAAATGAACAATGTCAAAAATCCTATCATCATCGACCAAAATTATTGTCCAGGCTCTTGCGGTTCACAAAAAATGGTATAG
Protein sequenceShow/hide protein sequence
MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNR
PVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEE
DVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMV