; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G004910 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G004910
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTF-B3 domain-containing protein
Genome locationGy14Chr3:3941464..3942141
RNA-Seq ExpressionCsGy3G004910
SyntenyCsGy3G004910
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.50e-9971.74Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLV-------NEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG
        MV V Y YNNKIV ++VY+A L L +M   KS EPFEEP    N   SSTS S+V       NEQ PIVNEHAPVVNE L NN+  N NNENVAA VV  
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLV-------NEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG

Query:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT
        RD GR PPMAVIQNIIGECSPPFVKQLTKTDVTD+QGRLALHKEFVN NL PMFN DE L +GISV VYD EGREYDM F+LW SKLYVLTKSWK+FY  
Subjt:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT

Query:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG
        N LT+P EFI++WMFRHVV  KLCFAIMRG
Subjt:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.83e-5849.34Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLS-STSTSLVNE-QSPIVNEHAPVVNEVLPNNDDDNGNNENVA---AAVVVGRD
        MV VHY +NN+I+ +DVY+ + I + +      E F EP    + Q+S STS  + +E ++P +N    V  EV           E VA   A VV+   
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLS-STSTSLVNE-QSPIVNEHAPVVNEVLPNNDDDNGNNENVA---AAVVVGRD

Query:  QGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTND
            P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+
Subjt:  QGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTND

Query:  LTQPGEFISVWMFRHVVTQKLCFAIMRGQ
        LT PG ++++WMFRHV T K+CFA+  GQ
Subjt:  LTQPGEFISVWMFRHVVTQKLCFAIMRGQ

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.85e-5163.49Show/hide
Query:  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQ
         P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+
Subjt:  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQ

Query:  PGEFISVWMFRHVVTQKLCFAIMRGQ
        PG ++++WMFRHV T K+CFA+  GQ
Subjt:  PGEFISVWMFRHVVTQKLCFAIMRGQ

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]3.39e-16099.56Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
        MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP+VNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP

Query:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
        PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
Subjt:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG

Query:  EFISVWMFRHVVTQKLCFAIMRGQA
        EFISVWMFRHVVTQKLCFAIMRGQA
Subjt:  EFISVWMFRHVVTQKLCFAIMRGQA

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]1.29e-10471.24Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSS-TSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRF
        MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+ SS TS S++N+Q PI+ E AP+VNE LPNN     NNENVA AV  GRD GR 
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSS-TSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRF

Query:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP
        PPMAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+P
Subjt:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP

Query:  GEFISVWMFRHVVTQKLCFAIMRGQA
        GEFISVWMFRHVV +KLCFAIMRG A
Subjt:  GEFISVWMFRHVVTQKLCFAIMRGQA

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein1.64e-16099.56Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
        MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP+VNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP

Query:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
        PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
Subjt:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG

Query:  EFISVWMFRHVVTQKLCFAIMRGQA
        EFISVWMFRHVVTQKLCFAIMRGQA
Subjt:  EFISVWMFRHVVTQKLCFAIMRGQA

A0A0A0LC65 TF-B3 domain-containing protein4.21e-6781.45Show/hide
Query:  MAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGE
        MAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+PGE
Subjt:  MAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGE

Query:  FISVWMFRHVVTQKLCFAIMRGQA
        FISVWMFRHVV +KLCFAIMRG A
Subjt:  FISVWMFRHVVTQKLCFAIMRGQA

A0A5D3BAS8 Putative B3 domain-containing protein7.25e-10071.74Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLV-------NEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG
        MV V Y YNNKIV ++VY+A L L +M   KS EPFEEP    N   SSTS S+V       NEQ PIVNEHAPVVNE L NN+  N NNENVAA VV  
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLV-------NEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG

Query:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT
        RD GR PPMAVIQNIIGECSPPFVKQLTKTDVTD+QGRLALHKEFVN NL PMFN DE L +GISV VYD EGREYDM F+LW SKLYVLTKSWK+FY  
Subjt:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT

Query:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG
        N LT+P EFI++WMFRHVV  KLCFAIMRG
Subjt:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG

A0A6J1CTE7 putative B3 domain-containing protein At4g031701.37e-4039Show/hide
Query:  NNKIVAEDVYKASLILYDMALS------------------KSVEPFEEPIDR---FNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVA
        N K    +VY+A++ LY M+ S                  + V  F++P  +    N+ + + +   V+E+    +     VN+  P  D  N NN+   
Subjt:  NNKIVAEDVYKASLILYDMALS------------------KSVEPFEEPIDR---FNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVA

Query:  AAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFN---DDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLT
             G ++   PP+  I+++IG+CS  + K+LT +DV + QGRLA+ KEFV   L PMFN   ++E+L +GI V VY+ EGRE+ M FK+WASKLYVL 
Subjt:  AAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFN---DDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLT

Query:  KSWKEFYKTNDLTQP--GEFISVWMFRHVVTQKLCFAIMRG
        K WK F K N+LT    GEF+++WMFRH  T  LCFAI+ G
Subjt:  KSWKEFYKTNDLTQP--GEFISVWMFRHVVTQKLCFAIMRG

A0A6P5WRG4 uncharacterized protein LOC111276629 isoform X34.48e-3549.59Show/hide
Query:  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTK-SWKEFYKTNDLT
         PP+A +  +IG+CS PF K+LT+TD+TD Q RL+L+K+ V   + P+  +DED+ +GI VI YDIEG+EY+M F  W+ K+YVLT   WK FY+ + L 
Subjt:  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTK-SWKEFYKTNDLT

Query:  QPGEFISVWMFRHVVTQKLCFAI
        +  + ++VWMFRH +TQ +CF I
Subjt:  QPGEFISVWMFRHVVTQKLCFAI

SwissProt top hitse value%identityAlignment
Q9LM90 B3 domain-containing protein At1g206002.2e-0836.56Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS
        S P  KQL  +DV  +Q RL L KE V   + P   + ED   G+ V VY  +G    M FK+W   K  VLT  W +F     L +  +F++
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS

Q9ZR14 Putative B3 domain-containing protein At4g031702.0e-1744.04Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV
        S P  KQL  +DV  +Q  L L KE V   + P   D E+   GI V VY  +G+   M FK+W   K  VLT  WK+F +   L+   +F++VWMFRH+
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV

Query:  VTQKLCFAI
         T+KLCFAI
Subjt:  VTQKLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031603.2e-1539.81Show/hide
Query:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC
        +QL  +DV DNQ RL L KE V   +D +   ++    G++V VY   G  + M+ K+W     VLT  WK F K+  L +  +F+++WMFRH  T+++C
Subjt:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC

Query:  FAI
        FAI
Subjt:  FAI

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein1.6e-0936.56Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS
        S P  KQL  +DV  +Q RL L KE V   + P   + ED   G+ V VY  +G    M FK+W   K  VLT  W +F     L +  +F++
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)2.3e-1639.81Show/hide
Query:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC
        +QL  +DV DNQ RL L KE V   +D +   ++    G++V VY   G  + M+ K+W     VLT  WK F K+  L +  +F+++WMFRH  T+++C
Subjt:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC

Query:  FAI
        FAI
Subjt:  FAI

AT4G03170.1 AP2/B3-like transcriptional factor family protein1.4e-1844.04Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV
        S P  KQL  +DV  +Q  L L KE V   + P   D E+   GI V VY  +G+   M FK+W   K  VLT  WK+F +   L+   +F++VWMFRH+
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV

Query:  VTQKLCFAI
         T+KLCFAI
Subjt:  VTQKLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGA
AGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAATAGTCAATGAACATGCTCCTGTAGTCAATGAAGTTCTAC
CCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTAGTCGGTAGAGATCAGGGTAGATTTCCTCCGATGGCAGTGATCCAAAACATAATTGGA
GAGTGCAGCCCACCATTTGTGAAGCAATTGACAAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTT
CAATGATGATGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAA
CAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATT
ATGAGAGGACAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGA
AGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAATAGTCAATGAACATGCTCCTGTAGTCAATGAAGTTCTAC
CCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTAGTCGGTAGAGATCAGGGTAGATTTCCTCCGATGGCAGTGATCCAAAACATAATTGGA
GAGTGCAGCCCACCATTTGTGAAGCAATTGACAAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTT
CAATGATGATGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAA
CAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATT
ATGAGAGGACAAGCTTAA
Protein sequenceShow/hide protein sequence
MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIG
ECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAI
MRGQA