; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G005190 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G005190
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationGy14Chr3:4143173..4148527
RNA-Seq ExpressionCsGy3G005190
SyntenyCsGy3G005190
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0070469 - respirasome (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]7.09e-9696.62Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
XP_004152928.1 uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus]3.15e-99100Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
XP_031738721.1 uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]6.95e-99100Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]3.01e-9495.95Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEGNLRKIISTGQV GPDLKSFIRQ PTGSEGAQDVEGL TRDSLR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]2.37e-9495.95Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEGNLRKIISTGQV GPDLKSFIRQ PTGSEGAQDVEGL TRDSLR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
TrEMBL top hitse value%identityAlignment
A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.52e-99100Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.43e-9696.62Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
A0A5D3BTS9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.09e-8789.86Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEG Q       R+  R
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.54e-8283.11Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA+FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
        NS+EGNLRK+IS  QV GPDL SFIRQ PTGSEGAQD EG   R+S R
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.70e-8285.81Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
         SKE NLRK++ST  V GP+LKSFIRQ PTGSEGAQD EG   +DSLR
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR
SwissProt top hitse value%identityAlignment
Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 128.4e-0544.07Show/hide
Query:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT
        TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT
Arabidopsis top hitse value%identityAlignment
AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.2e-4660.53Show/hide
Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIH
         ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   H
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIH
AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.4e-3464.35Show/hide
Query:  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQD
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G + 
Subjt:  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQD

Query:  VEGLPTRDSLRWAIH
         E     D  R   H
Subjt:  VEGLPTRDSLRWAIH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTAT
AATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATC
ATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCT
GAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAA
mRNA sequenceShow/hide mRNA sequence
GTTCAAAGTTTTTTATTTTGATTGATATAACCCTAAATTTAGGTGTAGACGTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTG
TATTTATCCCAATTTTCTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAA
TCGAGGGATCTCCAAATTCAGAGCTTAAACTGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTT
TGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGG
AGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTC
CAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTT
CTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCC
AACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGA
CATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTT
ATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACT
TATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCATTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCT
TAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAGAAACCAATTCCCGAGTCCTCCGA
GCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCCAACATTAAAGCTAGCAGTTCGTTCT
ATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAA
ACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCC
TTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATT
GATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAATGTTG
ATGCATTCGATATTTTGTTGTGTGCTCCCGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATG
TGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTT
ACCCTGTATGATAGGATCGGGGGTTTCGAAGCAAAAATCATATGATTGCTAACACATCAATATGTTAATCTCAATTTATTGTACAAATGTAAATCAACATTGTTGTTTTT
ATTTAATTCTAG
Protein sequenceShow/hide protein sequence
MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKI
ISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIHFEFYTAIFYIGEVT