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CsGy3G005680 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G005680
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionWD repeat-containing protein 25
Genome locationGy14Chr3:4694550..4706429
RNA-Seq ExpressionCsGy3G005680
SyntenyCsGy3G005680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046999.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]2.08e-5086.87Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
TYK04782.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]2.10e-5286Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPPD
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP+
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPPD
XP_011650540.1 WD repeat-containing protein 25 isoform X1 [Cucumis sativus]1.33e-58100Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
XP_016901210.1 PREDICTED: WD repeat-containing protein 25 isoform X2 [Cucumis melo]9.15e-5186.87Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
XP_031738523.1 WD repeat-containing protein 25 isoform X2 [Cucumis sativus]3.55e-59100Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
TrEMBL top hitse value%identityAlignment
A0A0A0L2H7 Uncharacterized protein4.46e-63100Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
A0A1S4DZ03 WD repeat-containing protein 25 isoform X17.69e-5086.87Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
A0A1S4DZQ2 WD repeat-containing protein 25 isoform X24.43e-5186.87Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
A0A5A7U0J5 WD repeat-containing protein 25 isoform X21.00e-5086.87Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPP
A0A5D3C0T2 WD repeat-containing protein 25 isoform X21.02e-5286Show/hide
Query:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPPD
        MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPE EPFKFKPN+R  HCS SN + HERIMVPGRY+SKRERALLSS PASRAP+SFPNPS Q+PP+
Subjt:  MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPPD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54520.1 Transducin/WD40 repeat-like superfamily protein6.5e-0538.83Show/hide
Query:  MESLFKAYSNSSDDYDE---EDEPKPKRLALSSSPSKRPEREP--FKFKPNLRSL--HCSDSNSETHER--------IMVPGRYVSKRERALLSSTPASR
        M+ +  +Y+N SDD  E    +    K  A  S PSKRP   P   ++KP  R    H S S S+T           + VPGRYVSKRER+LL+S     
Subjt:  MESLFKAYSNSSDDYDE---EDEPKPKRLALSSSPSKRPEREP--FKFKPNLRSL--HCSDSNSETHER--------IMVPGRYVSKRERALLSSTPASR

Query:  APD
         PD
Subjt:  APD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCTGTTCAAAGCTTACTCAAATTCCTCTGACGATTACGACGAAGAAGATGAACCTAAGCCCAAGCGCTTGGCCCTCTCCTCTTCACCTTCAAAGAGACCCGA
ACGCGAACCTTTTAAATTCAAGCCGAACTTACGGTCATTGCATTGCTCGGACTCTAATTCTGAGACTCATGAGAGGATTATGGTTCCTGGACGCTACGTTTCCAAGAGAG
AGCGAGCACTCTTGAGTTCAACTCCAGCATCAAGGGCTCCAGACTCATTTCCTAACCCATCATTTCAAACTCCACCTGATTTTTCAAACAAAAGCAGAGCTCAATATGAA
AGATACAAGCAAGGATGTGCAAATAGGGAAAGTAAAAGGTGGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTCTGTTCAAAGCTTACTCAAATTCCTCTGACGATTACGACGAAGAAGATGAACCTAAGCCCAAGCGCTTGGCCCTCTCCTCTTCACCTTCAAAGAGACCCGA
ACGCGAACCTTTTAAATTCAAGCCGAACTTACGGTCATTGCATTGCTCGGACTCTAATTCTGAGACTCATGAGAGGATTATGGTTCCTGGACGCTACGTTTCCAAGAGAG
AGCGAGCACTCTTGAGTTCAACTCCAGCATCAAGGGCTCCAGACTCATTTCCTAACCCATCATTTCAAACTCCACCTGATTTTTCAAACAAAAGCAGAGCTCAATATGAA
AGATACAAGCAAGGATGTGCAAATAGGGAAAGTAAAAGGTGGATATGA
Protein sequenceShow/hide protein sequence
MESLFKAYSNSSDDYDEEDEPKPKRLALSSSPSKRPEREPFKFKPNLRSLHCSDSNSETHERIMVPGRYVSKRERALLSSTPASRAPDSFPNPSFQTPPDFSNKSRAQYE
RYKQGCANRESKRWI