; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G005710 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G005710
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionexosome complex exonuclease RRP44 homolog A
Genome locationGy14Chr3:4738778..4741539
RNA-Seq ExpressionCsGy3G005710
SyntenyCsGy3G005710
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR002716 - PIN domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR029060 - PIN-like domain superfamily
IPR033771 - Rrp44-like cold shock domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650154.1 hypothetical protein Csa_010466 [Cucumis sativus]3.37e-23797.69Show/hide
Query:  MIYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE
        MIYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE
Subjt:  MIYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE

Query:  TIRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDANK-------PSKRKVLYSEHKPMSEIASGLHRGI
        TIRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDANK       PSKRKVLYSEHKPMSEIASGLHRGI
Subjt:  TIRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDANK-------PSKRKVLYSEHKPMSEIASGLHRGI

Query:  YHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPGRLMMLQQLHLLEILLVHHAQLD
        YHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPGRLMMLQQLHL+EILLVHHAQLD
Subjt:  YHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPGRLMMLQQLHLLEILLVHHAQLD

Query:  VSLVSESLTGIRKLLWQFVRFLCSMGCLLLYTLYAFSYTNKYLNMF
        VSLVSESLTGIRKLLWQFVRFLCSMGCLLLYTLYAFSYTNKYLNMF
Subjt:  VSLVSESLTGIRKLLWQFVRFLCSMGCLLLYTLYAFSYTNKYLNMF

XP_008454914.1 PREDICTED: exosome complex exonuclease RRP44 homolog A [Cucumis melo]1.38e-15386.67Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY      +KC+SSVA LG+STSPILVLDTNVVLTQI LLEN AIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTYIKDMSGE+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA
                IRVAA WYQNHLGGAT VLLITNDRENRR+A+EEGICAETIESYVRSLGQTHLLDLLVQSAN DAN       +PSKRKVLYSEHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

XP_011658916.2 exosome complex exonuclease RRP44 homolog A [Cucumis sativus]2.17e-15286.32Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY      +KC+SSVA LGASTSPILVLDTNVVLTQI LLEN AIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTYIKDMSGE+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA
                IRVAAQWYQNHLGGAT VLLITNDRENRR+A+EEGI AETIESYV+SLGQTHLLDLLVQSAN DAN       +PSKRKVLYSEHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+EDDEEEDVHLVPG
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

XP_022952404.1 exosome complex exonuclease RRP44 homolog A-like [Cucurbita moschata]3.69e-15085.92Show/hide
Query:  QKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET--------
        +KC+SSVA L ASTSPILVLDTNVVL QI LLEN AIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTY+K+MSGE+        
Subjt:  QKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET--------

Query:  IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIY
        IRVAAQWYQNH+GGAT VLLITNDRENRR+A+EEGICAETIESYVRSLGQTHLLDLLVQSAN D N       +PSKRKVLY EHKPMSEI SGLHRGIY
Subjt:  IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIY

Query:  HQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        HQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE+DDEEEDVHLVPG
Subjt:  HQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

XP_022972336.1 exosome complex exonuclease RRP44 homolog A-like [Cucurbita maxima]1.31e-15086.28Show/hide
Query:  QKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET--------
        +KC+SSVA L ASTSPILVLDTNVVL QI LLEN AIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTY+K+MSGE+        
Subjt:  QKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET--------

Query:  IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIY
        IRVAAQWYQNH+GGAT VLLITNDRENRR+A+EEGICAETIESYVRSLGQTHLLDLLVQSAN DAN       +PSKRKVLY EHKPMSEI SGLHRGIY
Subjt:  IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIY

Query:  HQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        HQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE+DDEEEDVHLVPG
Subjt:  HQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

TrEMBL top hitse value%identityAlignment
A0A0A0K821 Uncharacterized protein1.69e-15487.02Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY      +KC+SSVA LGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTYIKDMSGE+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA
                IRVAAQWYQNHLGGAT VLLITNDRENRR+A+EEGI AETIESYV+SLGQTHLLDLLVQSAN DAN       +PSKRKVLYSEHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIAD+EDDEEEDVHLVPG
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

A0A0A0L2I2 PINc domain-containing protein7.68e-15792.86Show/hide
Query:  ESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGETIRVAA-QWYQN
         SSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE+  +   +WYQN
Subjt:  ESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGETIRVAA-QWYQN

Query:  HLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRY
        HLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN DAN       +PSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRY
Subjt:  HLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRY

Query:  NPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIA
        NPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIA
Subjt:  NPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIA

A0A1S3BZS3 exosome complex exonuclease RRP44 homolog A6.69e-15486.67Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY      +KC+SSVA LG+STSPILVLDTNVVLTQI LLEN AIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTYIKDMSGE+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA
                IRVAA WYQNHLGGAT VLLITNDRENRR+A+EEGICAETIESYVRSLGQTHLLDLLVQSAN DAN       +PSKRKVLYSEHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

A0A5A7SKL0 Exosome complex exonuclease RRP44-like protein A6.69e-15486.67Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY      +KC+SSVA LG+STSPILVLDTNVVLTQI LLEN AIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTYIKDMSGE+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA
                IRVAA WYQNHLGGAT VLLITNDRENRR+A+EEGICAETIESYVRSLGQTHLLDLLVQSAN DAN       +PSKRKVLYSEHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

A0A6J1I5P7 exosome complex exonuclease RRP44 homolog A-like6.36e-15186.28Show/hide
Query:  QKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET--------
        +KC+SSVA L ASTSPILVLDTNVVL QI LLEN AIDDVVMLS+VLDEVKNKNLSVYNRVRALCSNPL RFFVF NEHHKDTY+K+MSGE+        
Subjt:  QKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET--------

Query:  IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIY
        IRVAAQWYQNH+GGAT VLLITNDRENRR+A+EEGICAETIESYVRSLGQTHLLDLLVQSAN DAN       +PSKRKVLY EHKPMSEI SGLHRGIY
Subjt:  IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDAN-------KPSKRKVLYSEHKPMSEIASGLHRGIY

Query:  HQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
        HQGKLRVNRYNPFEAYVGSESIGDEIIIY RTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE+DDEEEDVHLVPG
Subjt:  HQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

SwissProt top hitse value%identityAlignment
P37202 Exosome complex exonuclease dis36.9e-3031.21Show/hide
Query:  LVLDTNVVLTQIGLLEN-SAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIK--------DMSGETIRVAAQWYQNHLGG-A
        L+ D+N+    I  LE+ +   DV++L  V  E+ +K++ +YNR++ LC     RF  F NE   DT+++        D +   IR AA W+ +HL    
Subjt:  LVLDTNVVLTQIGLLEN-SAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIK--------DMSGETIRVAAQWYQNHLGG-A

Query:  TCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTH-LLDLLVQSANTDANK---PSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYVG
          ++L+T+DREN R A E+GI   T++ YV+ L  +  LLD++   A+  A+K    S  K +Y  H  MS + + +  G  H+G + ++ YN  E  V 
Subjt:  TCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTH-LLDLLVQSANTDANK---PSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYVG

Query:  SESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPGRLMMLQQLHLLEILLVHHAQLDVSLVSESLTGIRKLLWQ
               +++  R N+NRA  GD+V +++L +DQW  E     A+E  D++EDV +         +++ LE++   +A     +V     GI K  W+
Subjt:  SESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPGRLMMLQQLHLLEILLVHHAQLDVSLVSESLTGIRKLLWQ

Q08162 Exosome complex exonuclease DIS32.8e-3134.22Show/hide
Query:  LVLDTNVVLTQIGLLEN-SAIDDVVMLSVVLDEVKNKNLSVYNRVRALC--SNPLWRFFVFFNEHHKDTYIKDMSGET--------IRVAAQWYQNHLGG
        +VLDTNVVL  I LLEN +   DV++  +VLDEV+NK+  VY R+R LC  S+   RF VF NE  + T+++ +  ET        IR   QWY  HL  
Subjt:  LVLDTNVVLTQIGLLEN-SAIDDVVMLSVVLDEVKNKNLSVYNRVRALC--SNPLWRFFVFFNEHHKDTYIKDMSGET--------IRVAAQWYQNHLGG

Query:  ATC-VLLITNDRENRRRA---MEEGICAETIESYVRSL-GQTHLLDLLVQ--SANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFE
            V+L+TNDR NR  A   +E  I  +++  Y+  L     + D + Q  S + D  + +     + E+   + +  GL  G+ +QG ++++ YN  E
Subjt:  ATC-VLLITNDRENRRRA---MEEGICAETIESYVRSL-GQTHLLDLLVQ--SANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFE

Query:  AYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG
          V        ++I  + N+NRAF+GD V VELL + +W    S+ +  E  D  ++  +  G
Subjt:  AYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPG

Q9CSH3 Exosome complex exonuclease RRP441.1e-4341.7Show/hide
Query:  LVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE--------TIRVAAQWYQNHLGGATC
        L+ DTNV+L QI +LE+ AI +V++L  V+ EV+N++  +Y R+R + +N    F+ F NEHHK+TYI+   GE         IRVAA+WY  HL     
Subjt:  LVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE--------TIRVAAQWYQNHLGGATC

Query:  -----VLLITNDRENRRRAMEEGICAETIESYVRSL-GQTHLLDLLVQSANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYV-
             V+LITNDR+N+ +A++EGI A T E YV+SL     L+D L   ++ + N+    K+++SEH P+S++  G+  G Y QG  R +R N  EA V 
Subjt:  -----VLLITNDRENRRRAMEEGICAETIESYVRSL-GQTHLLDLLVQSANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYV-

Query:  --GSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE---EDDEEED
          G +    EI+I    ++NRA   D+VAVELL R QW    S+ + DE   EDD E+D
Subjt:  --GSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADE---EDDEEED

Q9SHL7 Exosome complex exonuclease RRP44 homolog A1.0e-9765.14Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY   F+ + C+SS A L  S+S I+V+DTNVVL QI LLEN AID VV+LSVVLDEVKN+N SVYNR+R LCSNP  +F+VF N  HKDTY++ M  E+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN-------TDANKPSKRKVLYSEHKPMSEIA
                IRVA  WYQ HLG  + VLL+TNDREN+R+A EEGI AETIE+YV+SLGQ  LLDLL Q  N        D ++PSKRK++Y EHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN-------TDANKPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVP
        +GLHRGIYHQGKLRVNR+NP+EAYVGSESIG+EIIIY R+NMNRAFDGD+VAVELL RDQW +EK+L+IA+E+D+E++ VHL P
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVP

Q9Y2L1 Exosome complex exonuclease RRP443.2e-4340.78Show/hide
Query:  LVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE--------TIRVAAQWYQNHLGGATC
        L+ DTNV+L QI +LE+ AI +V++L  VL EV+N++  VY R+R + +N    F+ F NEHH++TY++   GE         IRVAA+WY  HL   + 
Subjt:  LVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGE--------TIRVAAQWYQNHLGGATC

Query:  -----VLLITNDRENRRRAMEEGICAETIESYVRSL-GQTHLLDLLVQSANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYV-
             V+ ITNDR N+ +A+EEGI A T E YV+SL     L+D L    + + N+    K+++SEH P+S++  G+  G Y QG  R +R N  EA V 
Subjt:  -----VLLITNDRENRRRAMEEGICAETIESYVRSL-GQTHLLDLLVQSANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYV-

Query:  --GSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEE
          G      EII+    ++NRA   D+VAVELL + QW    S+ + DE  +EE+
Subjt:  --GSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEE

Arabidopsis top hitse value%identityAlignment
AT2G17510.1 ribonuclease II family protein7.2e-9965.14Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY   F+ + C+SS A L  S+S I+V+DTNVVL QI LLEN AID VV+LSVVLDEVKN+N SVYNR+R LCSNP  +F+VF N  HKDTY++ M  E+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN-------TDANKPSKRKVLYSEHKPMSEIA
                IRVA  WYQ HLG  + VLL+TNDREN+R+A EEGI AETIE+YV+SLGQ  LLDLL Q  N        D ++PSKRK++Y EHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN-------TDANKPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVP
        +GLHRGIYHQGKLRVNR+NP+EAYVGSESIG+EIIIY R+NMNRAFDGD+VAVELL RDQW +EK+L+IA+E+D+E++ VHL P
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVP

AT2G17510.2 ribonuclease II family protein7.2e-9965.14Show/hide
Query:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET
        IY   F+ + C+SS A L  S+S I+V+DTNVVL QI LLEN AID VV+LSVVLDEVKN+N SVYNR+R LCSNP  +F+VF N  HKDTY++ M  E+
Subjt:  IYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGET

Query:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN-------TDANKPSKRKVLYSEHKPMSEIA
                IRVA  WYQ HLG  + VLL+TNDREN+R+A EEGI AETIE+YV+SLGQ  LLDLL Q  N        D ++PSKRK++Y EHKPMSEI 
Subjt:  --------IRVAAQWYQNHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSAN-------TDANKPSKRKVLYSEHKPMSEIA

Query:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVP
        +GLHRGIYHQGKLRVNR+NP+EAYVGSESIG+EIIIY R+NMNRAFDGD+VAVELL RDQW +EK+L+IA+E+D+E++ VHL P
Subjt:  SGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATATTGTGGGCTTCGCTTTGCAAAAATGTGAGTCTTCAGTTGCTTGTTTGGGTGCTTCTACATCGCCAATTCTAGTTCTCGACACCAATGTTGTTCTTACTCA
GATTGGTTTGCTTGAGAATTCTGCTATTGATGACGTGGTTATGCTATCAGTTGTGCTGGATGAGGTTAAGAACAAGAACCTATCTGTTTACAACAGAGTTAGAGCTCTCT
GCAGCAATCCCCTGTGGAGATTCTTTGTTTTCTTTAACGAGCACCACAAGGATACATATATTAAGGACATGAGTGGAGAAACCATTCGAGTGGCTGCTCAGTGGTATCAA
AATCATCTTGGTGGTGCTACTTGTGTTCTACTCATAACCAATGACAGAGAGAATAGGAGAAGGGCTATGGAAGAGGGAATTTGTGCAGAGACAATTGAATCTTATGTTAG
ATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATACAGATGCAAATAAGCCATCGAAGAGAAAGGTTCTTTACTCCGAGCATAAACCCATGTCAG
AAATTGCTTCTGGTTTGCATCGTGGTATATATCATCAAGGAAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCATATGTTGGAAGTGAGAGTATTGGTGATGAAATT
ATTATTTATAGGCGTACCAACATGAACCGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTCTATCTCGAGATCAGTGGCATGAAGAGAAGTCTCTGACTATAGCAGA
CGAAGAAGATGATGAGGAAGAAGATGTTCATCTTGTTCCTGGTAGGCTGATGATGCTCCAACAGCTGCATCTATTGGAGATTCTTCTAGTTCACCACGCCCAGCTGGACG
TGTCATTGGTATCAGAAAGCTTAACTGGCATTCGTAAGCTGTTGTGGCAATTTGTTAGATTCCTCTGTTCCATGGGGTGTCTTTTGCTGTACACATTATATGCTTTCTCT
TATACAAATAAATACTTAAACATGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATATATATTGTGGGCTTCGCTTTGCAAAAATGTGAGTCTTCAGTTGCTTGTTTGGGTGCTTCTACATCGCCAATTCTAGTTCTCGACACCAATGTTGTTCTTACTCA
GATTGGTTTGCTTGAGAATTCTGCTATTGATGACGTGGTTATGCTATCAGTTGTGCTGGATGAGGTTAAGAACAAGAACCTATCTGTTTACAACAGAGTTAGAGCTCTCT
GCAGCAATCCCCTGTGGAGATTCTTTGTTTTCTTTAACGAGCACCACAAGGATACATATATTAAGGACATGAGTGGAGAAACCATTCGAGTGGCTGCTCAGTGGTATCAA
AATCATCTTGGTGGTGCTACTTGTGTTCTACTCATAACCAATGACAGAGAGAATAGGAGAAGGGCTATGGAAGAGGGAATTTGTGCAGAGACAATTGAATCTTATGTTAG
ATCATTGGGGCAAACTCATTTACTTGATCTGTTAGTGCAAAGTGCAAATACAGATGCAAATAAGCCATCGAAGAGAAAGGTTCTTTACTCCGAGCATAAACCCATGTCAG
AAATTGCTTCTGGTTTGCATCGTGGTATATATCATCAAGGAAAGCTCCGTGTTAATCGATACAACCCATTTGAAGCATATGTTGGAAGTGAGAGTATTGGTGATGAAATT
ATTATTTATAGGCGTACCAACATGAACCGGGCTTTTGATGGTGATGTTGTGGCAGTTGAACTTCTATCTCGAGATCAGTGGCATGAAGAGAAGTCTCTGACTATAGCAGA
CGAAGAAGATGATGAGGAAGAAGATGTTCATCTTGTTCCTGGTAGGCTGATGATGCTCCAACAGCTGCATCTATTGGAGATTCTTCTAGTTCACCACGCCCAGCTGGACG
TGTCATTGGTATCAGAAAGCTTAACTGGCATTCGTAAGCTGTTGTGGCAATTTGTTAGATTCCTCTGTTCCATGGGGTGTCTTTTGCTGTACACATTATATGCTTTCTCT
TATACAAATAAATACTTAAACATGTTCTAG
Protein sequenceShow/hide protein sequence
MIYIVGFALQKCESSVACLGASTSPILVLDTNVVLTQIGLLENSAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLWRFFVFFNEHHKDTYIKDMSGETIRVAAQWYQ
NHLGGATCVLLITNDRENRRRAMEEGICAETIESYVRSLGQTHLLDLLVQSANTDANKPSKRKVLYSEHKPMSEIASGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEI
IIYRRTNMNRAFDGDVVAVELLSRDQWHEEKSLTIADEEDDEEEDVHLVPGRLMMLQQLHLLEILLVHHAQLDVSLVSESLTGIRKLLWQFVRFLCSMGCLLLYTLYAFS
YTNKYLNMF