; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G006150 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G006150
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L21
Genome locationGy14Chr3:5196733..5198481
RNA-Seq ExpressionCsGy3G006150
SyntenyCsGy3G006150
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001147 - Ribosomal protein L21e
IPR008991 - Translation protein SH3-like domain superfamily
IPR036948 - Ribosomal protein L21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580788.1 60S ribosomal protein L21-1, partial [Cucurbita argyrosperma subsp. sororia]1.03e-5270.77Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

XP_022934302.1 60S ribosomal protein L21-1 [Cucurbita moschata]7.27e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

XP_022934303.1 60S ribosomal protein L21-1-like [Cucurbita moschata]7.27e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

XP_022983129.1 60S ribosomal protein L21-1-like [Cucurbita maxima]7.27e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

XP_038906379.1 60S ribosomal protein L21-1 [Benincasa hispida]2.55e-5372.31Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++IKKRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

TrEMBL top hitse value%identityAlignment
A0A6J1F2B9 60S ribosomal protein L21-13.52e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

A0A6J1F7A4 60S ribosomal protein L21-1-like3.52e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

A0A6J1IYF0 60S ribosomal protein L21-13.52e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

A0A6J1J6F8 60S ribosomal protein L21-1-like3.52e-5371.54Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN AVHKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++I+KRIHV VEHV              KND  K EAKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

A0A6J1KU90 60S ribosomal protein L21-2-like4.99e-5370.77Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGRVWNVTK AI VEINKQ        VGN++IKKRIHV VEHV              KND  K +AKAKGE+ICTKRQPEGP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEGALMET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

SwissProt top hitse value%identityAlignment
O42706 60S ribosomal protein L21-B9.8e-1738.16Show/hide
Query:  TFQTKFQSHLVWDLEKNLIGRSVCSCFD-WVNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHVK--------
        TFQ  F+ H    L   L    V    D  VN AV KGMPHK+YHG+TG V+NVT+ ++ V I K         VGN+ ++KR++V +EHVK        
Subjt:  TFQTKFQSHLVWDLEKNLIGRSVCSCFD-WVNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHVK--------

Query:  ------NDVPKDEAKAKGEIICTKRQPEGPKPGFMVEGALMETMTLIPL-YD
              N+  + EAKA+G+ +  +RQP  P     V     E +TL P+ YD
Subjt:  ------NDVPKDEAKAKGEIICTKRQPEGPKPGFMVEGALMETMTLIPL-YD

O82574 60S ribosomal protein L216.8e-1843.23Show/hide
Query:  FQTKFQSHLVWDLEKNLIGRSVCSCFDWV-NDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHVK---------
        F+T    HL   L    IG  V    D V N AVHKGMP K+YHGRTG VWNVTK AI VEINK+++        +++IKKRIHV ++HVK         
Subjt:  FQTKFQSHLVWDLEKNLIGRSVCSCFDWV-NDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHVK---------

Query:  -----NDVPKDEAK-AKGEIICTKRQPEGPKPGFMV--EGALMETMTLIPLYDVV
             ND  K +A  AK  +  TKR P  PK G ++  +G + ET   IP   +V
Subjt:  -----NDVPKDEAK-AKGEIICTKRQPEGPKPGFMV--EGALMETMTLIPLYDVV

Q43291 60S ribosomal protein L21-13.5e-3863.08Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGR+WNVTK A+ VE+NKQI        GN++I+KRIHV VEHV              KND  K  AKA GE I TKRQP+GP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEG  +ET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

Q9FDZ9 60S ribosomal protein L21-25.4e-3963.08Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGR+WNVTK A+ VE+NKQI        GN++I+KRIHV VEHV              +NDV K +AKA+GE I TKRQP+GP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEG  +ET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

Q9UUC1 60S ribosomal protein L21-A9.8e-1738.16Show/hide
Query:  TFQTKFQSHLVWDLEKNLIGRSVCSCFD-WVNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHVK--------
        TFQ  F+ H    L   L    V    D  VN AV KGMPHK+YHG+TG V+NVT+ ++ V I K         VGN+ ++KR++V +EHVK        
Subjt:  TFQTKFQSHLVWDLEKNLIGRSVCSCFD-WVNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHVK--------

Query:  ------NDVPKDEAKAKGEIICTKRQPEGPKPGFMVEGALMETMTLIPL-YD
              N+  + EAKA+G+ +  +RQP  P     V     E +TL P+ YD
Subjt:  ------NDVPKDEAKAKGEIICTKRQPEGPKPGFMVEGALMETMTLIPL-YD

Arabidopsis top hitse value%identityAlignment
AT1G09590.1 Translation protein SH3-like family protein2.5e-3963.08Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGR+WNVTK A+ VE+NKQI        GN++I+KRIHV VEHV              KND  K  AKA GE I TKRQP+GP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEG  +ET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

AT1G09690.1 Translation protein SH3-like family protein2.5e-3963.08Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGR+WNVTK A+ VE+NKQI        GN++I+KRIHV VEHV              KND  K  AKA GE I TKRQP+GP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEG  +ET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

AT1G57660.1 Translation protein SH3-like family protein3.8e-4063.08Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGR+WNVTK A+ VE+NKQI        GN++I+KRIHV VEHV              +NDV K +AKA+GE I TKRQP+GP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEG  +ET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

AT1G57860.1 Translation protein SH3-like family protein3.8e-4063.08Show/hide
Query:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP
        VN A+HKGMPHKFYHGRTGR+WNVTK A+ VE+NKQI        GN++I+KRIHV VEHV              +NDV K +AKA+GE I TKRQP+GP
Subjt:  VNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHVGVEHV--------------KNDVPKDEAKAKGEIICTKRQPEGP

Query:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY
        KPGFMVEG  +ET+T IP YDVVND KGGY
Subjt:  KPGFMVEGALMETMTLIPLYDVVNDFKGGY

AT1G79230.1 mercaptopyruvate sulfurtransferase 13.8e-0870Show/hide
Query:  AASEAIEKIYQGQAISSLLNVGPITFQTKFQSHLVWDLEK
        AASEAIEKIYQGQ +S      PITFQTKFQ HLVW L++
Subjt:  AASEAIEKIYQGQAISSLLNVGPITFQTKFQSHLVWDLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAAGCGAGGCAATAGAGAAAATATATCAGGGGCAAGCTATAAGTTCATTACTTAATGTTGGGCCAATTACATTTCAGACCAAGTTTCAATCACATCTGGTCTG
GGACCTTGAGAAGAACTTGATTGGAAGAAGTGTTTGTTCTTGTTTTGATTGGGTGAACGACGCCGTCCACAAGGGTATGCCTCATAAATTTTACCACGGTCGCACAGGTC
GCGTATGGAATGTTACAAAGTGTGCCATCAGCGTCGAGATTAACAAGCAGATTCAGGATTCTTTTTTAAGATATGTCGGGAACAAAATGATTAAGAAGAGAATTCATGTT
GGAGTCGAGCACGTGAAGAATGACGTGCCGAAGGACGAAGCCAAGGCCAAAGGTGAAATCATCTGCACCAAGAGGCAACCAGAAGGCCCTAAACCAGGGTTCATGGTTGA
AGGTGCTTTAATGGAGACTATGACTCTTATTCCATTATATGATGTTGTCAATGATTTCAAGGGTGGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAAGCGAGGCAATAGAGAAAATATATCAGGGGCAAGCTATAAGTTCATTACTTAATGTTGGGCCAATTACATTTCAGACCAAGTTTCAATCACATCTGGTCTG
GGACCTTGAGAAGAACTTGATTGGAAGAAGTGTTTGTTCTTGTTTTGATTGGGTGAACGACGCCGTCCACAAGGGTATGCCTCATAAATTTTACCACGGTCGCACAGGTC
GCGTATGGAATGTTACAAAGTGTGCCATCAGCGTCGAGATTAACAAGCAGATTCAGGATTCTTTTTTAAGATATGTCGGGAACAAAATGATTAAGAAGAGAATTCATGTT
GGAGTCGAGCACGTGAAGAATGACGTGCCGAAGGACGAAGCCAAGGCCAAAGGTGAAATCATCTGCACCAAGAGGCAACCAGAAGGCCCTAAACCAGGGTTCATGGTTGA
AGGTGCTTTAATGGAGACTATGACTCTTATTCCATTATATGATGTTGTCAATGATTTCAAGGGTGGCTATTAG
Protein sequenceShow/hide protein sequence
MAASEAIEKIYQGQAISSLLNVGPITFQTKFQSHLVWDLEKNLIGRSVCSCFDWVNDAVHKGMPHKFYHGRTGRVWNVTKCAISVEINKQIQDSFLRYVGNKMIKKRIHV
GVEHVKNDVPKDEAKAKGEIICTKRQPEGPKPGFMVEGALMETMTLIPLYDVVNDFKGGY