; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G006170 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G006170
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationGy14Chr3:5222595..5222921
RNA-Seq ExpressionCsGy3G006170
SyntenyCsGy3G006170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064946.1 UPF0481 protein [Cucumis melo var. makuwa]2.34e-4370.37Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-
        + NITFKNGVL+IP LHI+D F+LM RN++AFEQ+ AGN+N Y T+Y+LF+D+LISTEKDV LLV +GVIINNIGGSDKEVS+LFN+LGKFV Q  SP+ 
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-

Query:  YDSISKAL
        ++ ISKAL
Subjt:  YDSISKAL

XP_008445583.2 PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo]2.31e-4370.37Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-
        + NITFKNGVL+IP LHI+D F+LM RN++AFEQ+ AGN+N Y T+Y+LF+D+LISTEKDV LLV +GVIINNIGGSDKEVS+LFN+LGKFV Q  SP+ 
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-

Query:  YDSISKAL
        ++ ISKAL
Subjt:  YDSISKAL

XP_038886293.1 UPF0481 protein At3g47200-like [Benincasa hispida]1.84e-4269.09Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGN---KNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSS
        + +I+FKNGVL+IPPLHI+D+FKL+LRN++AFEQ   G+   +NKY+ +YV+FLD+LIST+KDV+LLV+AGVIINNIGGSDKEVSDLFN+L KFVT  +S
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGN---KNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSS

Query:  PHYDSISKAL
         HYD ISK L
Subjt:  PHYDSISKAL

XP_038889346.1 UPF0481 protein At3g47200-like [Benincasa hispida]1.50e-5280.37Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY
        MR+ITFKNGVLEIPPLHI+D+F+LMLRNMVAFEQ+ A N+NKYVT+YVLFLD+LISTEKDV+LL+KAG+IINNIGG  KEVSDLFN+LGKFVT+SSS H+
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY

Query:  DSISKAL
        D IS+AL
Subjt:  DSISKAL

XP_038890800.1 UPF0481 protein At3g47200-like [Benincasa hispida]2.73e-4775.93Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY
        + NITFKNGVLEIPPLHI+D F+LMLRNMVAFEQ +AG KNKYV +YVLF+D+LISTEKDV LLV+AGVIIN IGGSDKEVSDLFN+L KF+T   S H+
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY

Query:  DSISKALC
        D I K LC
Subjt:  DSISKALC

TrEMBL top hitse value%identityAlignment
A0A1S3BCY5 UPF0481 protein At3g47200-like1.43e-4269.44Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY
        + +ITFKNGVL IPPLHI+D F+L+LRNMVAFEQ +A   NKYV +YVLF+D+LISTEKDV LLV+AGVIIN IGGSDKEV+DLFN+  KF+T   S ++
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY

Query:  DSISKALC
        DSI K LC
Subjt:  DSISKALC

A0A1S3BD29 LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like1.12e-4370.37Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-
        + NITFKNGVL+IP LHI+D F+LM RN++AFEQ+ AGN+N Y T+Y+LF+D+LISTEKDV LLV +GVIINNIGGSDKEVS+LFN+LGKFV Q  SP+ 
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-

Query:  YDSISKAL
        ++ ISKAL
Subjt:  YDSISKAL

A0A5A7V9V0 UPF0481 protein1.43e-4269.44Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY
        + +ITFKNGVL IPPLHI+D F+L+LRNMVAFEQ +A   NKYV +YVLF+D+LISTEKDV LLV+AGVIIN IGGSDKEV+DLFN+  KF+T   S ++
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY

Query:  DSISKALC
        DSI K LC
Subjt:  DSISKALC

A0A5A7VF39 UPF0481 protein1.13e-4370.37Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-
        + NITFKNGVL+IP LHI+D F+LM RN++AFEQ+ AGN+N Y T+Y+LF+D+LISTEKDV LLV +GVIINNIGGSDKEVS+LFN+LGKFV Q  SP+ 
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-

Query:  YDSISKAL
        ++ ISKAL
Subjt:  YDSISKAL

A0A5A7VGD0 UPF0481 protein6.26e-4267.59Show/hide
Query:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-
        + NI+FKNGVL+IP LHI+D F+LM RN++AFEQ+ AGN+N Y T+Y+LF+D+LISTEKDV LLV +GVIINNIGGSDKEVS+LFN+LGKFV    +P+ 
Subjt:  MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPH-

Query:  YDSISKAL
        ++ ISKAL
Subjt:  YDSISKAL

SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472002.0e-0738.46Show/hide
Query:  NITFKNGVLEIPPLHIFDNF-KLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFV
        N+  K   L+IP L  FD F      N VAFEQ+   + N+ +T Y++F+  L++ E+DV  L    +II N  GS+ EVS+ F ++ K V
Subjt:  NITFKNGVLEIPPLHIFDNF-KLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFV

Arabidopsis top hitse value%identityAlignment
AT3G50120.1 Plant protein of unknown function (DUF247)2.5e-1342.86Show/hide
Query:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY
        ++ FKNG LEIP L I D  K +  N++AFEQ    + N  +T Y++F+DNLI + +DV  L   G+I + + GSD EV+DLFN L + V   +   Y
Subjt:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHY

AT3G50130.1 Plant protein of unknown function (DUF247)5.6e-1346.51Show/hide
Query:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSL
        +I FKNG LEIP L I D  K +  N++AFEQ    + N  +T Y++F+DNLI + +DV  L   G+I + + G+D EV+DLFN L
Subjt:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSL

AT3G50150.1 Plant protein of unknown function (DUF247)1.1e-1346.67Show/hide
Query:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFV
        +I FKNG L+IP L I D  K +  N++AFEQ    + N  +T Y++F+DNLI++ +DV  L   G+I + + GSD EV+DLFN L K V
Subjt:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFV

AT3G50160.1 Plant protein of unknown function (DUF247)2.7e-1550Show/hide
Query:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFV
        +I FKNG L+IP L I D  K +  N++AFEQ      +K +T Y++F+DNLI++ +DV  L   G+I N + GSD EVSDLFN LGK V
Subjt:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFV

AT3G50170.1 Plant protein of unknown function (DUF247)8.7e-1447.67Show/hide
Query:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSL
        +I FKNG LEIP L I D  K +  N++AFEQ    + N ++T Y++F+DNLI++ +DV  L   G+I + + GSD EV+DLFN L
Subjt:  NITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACATAACCTTCAAAAACGGGGTTTTGGAAATCCCACCTTTACATATTTTTGATAACTTCAAACTTATGTTGCGAAACATGGTAGCATTTGAGCAATATACTGC
AGGAAATAAGAACAAGTATGTAACTGAATATGTGTTATTTCTAGATAATTTGATAAGTACAGAGAAAGACGTGTATTTACTTGTGAAGGCCGGAGTCATAATCAATAATA
TTGGTGGAAGTGATAAAGAAGTTTCAGATCTGTTTAACAGTCTCGGTAAATTTGTCACACAATCAAGTTCTCCCCACTATGACAGTATTAGCAAAGCTTTGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACATAACCTTCAAAAACGGGGTTTTGGAAATCCCACCTTTACATATTTTTGATAACTTCAAACTTATGTTGCGAAACATGGTAGCATTTGAGCAATATACTGC
AGGAAATAAGAACAAGTATGTAACTGAATATGTGTTATTTCTAGATAATTTGATAAGTACAGAGAAAGACGTGTATTTACTTGTGAAGGCCGGAGTCATAATCAATAATA
TTGGTGGAAGTGATAAAGAAGTTTCAGATCTGTTTAACAGTCTCGGTAAATTTGTCACACAATCAAGTTCTCCCCACTATGACAGTATTAGCAAAGCTTTGTGCTAA
Protein sequenceShow/hide protein sequence
MRNITFKNGVLEIPPLHIFDNFKLMLRNMVAFEQYTAGNKNKYVTEYVLFLDNLISTEKDVYLLVKAGVIINNIGGSDKEVSDLFNSLGKFVTQSSSPHYDSISKALC