CuGenDBv2

Gene ID	CsGy3G006210
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Winged helix-turn-helix DNA-binding domain containing protein
Genome location	Gy14Chr3:5259756..5263924
RNA-Seq Expression	CsGy3G006210
Synteny	CsGy3G006210
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004133703.1 uncharacterized protein LOC101203530 isoform X2 [Cucumis sativus]

1.57e-34

100

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_008452266.1 PREDICTED: uncharacterized protein LOC103493339 [Cucumis melo]

3.07e-32

93.22

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS+RVLW+CALGS IGMYMVAQER+LQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_022929341.1 uncharacterized protein LOC111435944 [Cucurbita moschata]

7.02e-29

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS +G+YMVAQERQLQNR RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_022943152.1 uncharacterized protein LOC111447969 [Cucurbita moschata]

7.02e-29

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS IG+YMV+QERQLQNR+RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_038903238.1 uncharacterized protein LOC120089884 [Benincasa hispida]

2.44e-29

88.14

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS IG+YMVAQERQLQNRQRML ESLKD ESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L386 Uncharacterized protein

3.25e-33

100

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A1S3BUK9 uncharacterized protein LOC103493339

1.49e-32

93.22

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS+RVLW+CALGS IGMYMVAQER+LQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A6J1CPB9 uncharacterized protein LOC111012874

4.83e-29

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCA+GS IG+YMVAQERQLQNRQRML ESL DVESGG  ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A6J1EMV3 uncharacterized protein LOC111435944

3.40e-29

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS +G+YMVAQERQLQNR RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A6J1FS83 uncharacterized protein LOC111447969

3.40e-29

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS IG+YMV+QERQLQNR+RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G15395.1 unknown protein

3.0e-16

62.71

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

AT3G15395.2 unknown protein

3.0e-16

62.71

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

AT3G15395.3 unknown protein

3.0e-16

62.71

Show/hide

Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

AT3G15395.4 unknown protein

3.0e-16

62.71

Show/hide

Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

Sequences

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CDS sequence

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ATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCGACGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACA
GAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTTGAATCTGGAGGAAATGTTGAAAATGTTTAG

mRNA sequence

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TTTCAGTATTTCTAATTCAGCGTCCCTCCCCAGCTACTGCATCCCCTCCGCCGCACGCAGCAGTCCGCCGCCGCCCCTCCTACCTGAAACAGTCTCACCGTCTGCACCGC
ATCTCTCTCCCTCTCACACTCTCACCTCTCCCTGAAATCGCAGTTATTTAAACTCTCTCAGTCCCCAACCCCTGCTGTTGAAGGATATGGGAGGCAGAGGAGTCATTGGT
GACAAATGGTCGACGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGA
GAGTCTTAAAGACGTTGAATCTGGAGGAAATGTTGAAAATGTTTAGGCACTTTAGAGCGTTGTTGAAATGTGAGCTCCAGACTATCAAGATTCTGCGTTTTCAAATTGCT
TCCATTCCTTATGGTGGCTACAATTCAACACTGTGAGTTTCCAACCATGTGAAATAATTAGAGCTTATGAGCGATGGACTTGGCTTTTGTTTGAATTCATGGAATACAAT
AATTTTACCGAGTCAATATCTAGTGGTCCATTTTGAGAAATGGGATTCAGAAACACACATCTCAGAAGTTCACAATTTTAAAAAACGTGTTTTTCACTAGTCAATGACTT
TGATAAACCTATTCACCTTCTCCTTCGATATCATTCTTTAGAGTAGGGTATTAGCTTTCCAACAACTCACCTAAGCCAAATCTCTTTTTCACTCTGGATGAGTATGATCG
TTAAGGAAGAAGGAACGCCTTGAGGCAGAGCGTTGTACTTAGAAATTCCTCTCTATCTCTACCTCTCAGCTCTTTCTTTCTCCCACAGGTTTGAATCTTCACAAATCTCA
CTTCCGTGATCATAGTAGATTCCTCCTCAATGTACAACAATGGAAATCTGATTTAAAAGACATCGTCTTCTAGCAAAAGCAATGACATTGATCAATACTCAAGACTTATC
CTTCCCATTGACCAATCCATCTTTAATCTCATCACAAAATTTCTCATTCTAGTAGAGTGAGTTTAGCTTAACGATAATTACAAAGATTTTTTTTCTTAGAACGCAAAGGT
TCCTTATCCATTCTTGCCATTGTTATACTCAAACAAAAGAAAATCTTCCCCATTCTATGCACAAAACCAGTGGATCCTTGACTTTTCAATTTTAGAAGGTACCCAATTCA
TTAGAGAAAGTAAATCCGTTCTTGTTACGTATACCAATTCCTAACCATTCTTCTCCACAGCCTCATATGTAAAGAAAATCACATTCTTCCACTGGGAAATTGCTCATGAA
AAGTCTCAACTTCGAATGCTTGCATTGCTATTTCACACACTGGTGCTCTTTTTGTTATAATGCGACGTAGTCACAGACAATTTCATCCTCTATTGCCTTCTGGACAAACG
TTGTGAGTGCTTTCAAATGAACGGCTTCCTTACTTCCTCGATTTAAACTCACCTCCTCCTTGCTTCCATTTTATCAGGACATTCATATCTTTGGGTTAACTTCACCAAAG
CGTTCTCGTTTGCATGAAACAAACGAAATACTTTTGTATTTCTAACTACCACTTGGATAAGTTGGGAAATCTCACTCTTTCTTTATAATTTCGTACATCAATGAAATTGT
TTCTCATAACACTCTTCTCCACGAAACCCACACACCATTTGAATTTCTAGTATAAAAAAAATATCAAACACATAGCTACATTTTGGATGTTATCCTTGGGCCAAACTACT
TTAATAATAATAATAGTAATAATAATAATGAAGCCTGTACTTATGCCCTTAGAATAAAAACCTAAAAATGGAAGATTCTGTTGATGAATTGAAATAGTGTGACAGTTCAA
TTCTTGTCTTGGTTACATCACACTGTTTTAGGTTCCAATTTTTGCTCGACATCCTAATGAATTTCTACAACTAAGGTAG

Protein sequence

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MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

CsGy3G006210 (gene) of Cucumber (Gy14) v2.1 genome