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CsGy3G007070 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G007070
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGag-pol fusion protein
Genome locationGy14Chr3:6181172..6181498
RNA-Seq ExpressionCsGy3G007070
SyntenyCsGy3G007070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042310.1 gag-pol fusion protein [Cucumis melo var. makuwa]1.02e-0559.52Show/hide
Query:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP
        T+KS +KM  HHLVAW PN   I LN  HSA SH SQC++ P
Subjt:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP

KAA0068098.1 hypothetical protein E6C27_scaffold238G00560 [Cucumis melo var. makuwa]5.28e-0844.16Show/hide
Query:  STSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYL
        ST  ST KMPK HL+AW P S  I  N  H AY HG QC+M  +F C               PT+L  L  P LP L
Subjt:  STSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYL

KGN56322.1 hypothetical protein Csa_010482 [Cucumis sativus]1.89e-73100Show/hide
Query:  MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSS
        MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSS
Subjt:  MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSS

Query:  RLAHHQNV
        RLAHHQNV
Subjt:  RLAHHQNV

TYK27665.1 uncharacterized protein E5676_scaffold93G00290 [Cucumis melo var. makuwa]6.67e-0557.14Show/hide
Query:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP
        T+KS +KM  HHLVAW PN   I LN  HSA SH S+C++ P
Subjt:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP

TrEMBL top hitse value%identityAlignment
A0A0A0L6V7 Uncharacterized protein9.14e-74100Show/hide
Query:  MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSS
        MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSS
Subjt:  MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSS

Query:  RLAHHQNV
        RLAHHQNV
Subjt:  RLAHHQNV

A0A5A7TG48 Gag-pol fusion protein4.93e-0659.52Show/hide
Query:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP
        T+KS +KM  HHLVAW PN   I LN  HSA SH SQC++ P
Subjt:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP

A0A5A7VJU1 Uncharacterized protein2.56e-0844.16Show/hide
Query:  STSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYL
        ST  ST KMPK HL+AW P S  I  N  H AY HG QC+M  +F C               PT+L  L  P LP L
Subjt:  STSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYL

A0A5D3DWI1 Uncharacterized protein3.23e-0557.14Show/hide
Query:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP
        T+KS +KM  HHLVAW PN   I LN  HSA SH S+C++ P
Subjt:  TSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCTCTTCCGCAAGAAGAAGAGTTTGAAGATGTCTACCTCAAAGAGCACTAGTAAAATGCCTAAGCATCACTTGGTCGCATGGCTTCCAAATTCATATCTCAT
AACTTTGAACAAAGTCCACTCAGCTTACTCACATGGGTCCCAATGTGTCATGTCGCCTACCTTCTCGTGTGGCCCTTACTCTCGTGCCTTGCCTTGGCCGCATTTTGTAG
CTCGCCCAACATATCTTCCTCAGTTAGCCAAGCCTCAACTTCCTTACTTAACTATGCCTTTGCCACCCAACTTTTCATCTCGCTTAGCACACCATCAAAATGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGCTCTTCCGCAAGAAGAAGAGTTTGAAGATGTCTACCTCAAAGAGCACTAGTAAAATGCCTAAGCATCACTTGGTCGCATGGCTTCCAAATTCATATCTCAT
AACTTTGAACAAAGTCCACTCAGCTTACTCACATGGGTCCCAATGTGTCATGTCGCCTACCTTCTCGTGTGGCCCTTACTCTCGTGCCTTGCCTTGGCCGCATTTTGTAG
CTCGCCCAACATATCTTCCTCAGTTAGCCAAGCCTCAACTTCCTTACTTAACTATGCCTTTGCCACCCAACTTTTCATCTCGCTTAGCACACCATCAAAATGTCTAG
Protein sequenceShow/hide protein sequence
MEKLFRKKKSLKMSTSKSTSKMPKHHLVAWLPNSYLITLNKVHSAYSHGSQCVMSPTFSCGPYSRALPWPHFVARPTYLPQLAKPQLPYLTMPLPPNFSSRLAHHQNV