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CsGy3G007120 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G007120
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionATP-dependent zinc metalloprotease FTSH 3, mitochondrial
Genome locationGy14Chr3:6218018..6219327
RNA-Seq ExpressionCsGy3G007120
SyntenyCsGy3G007120
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0004821 - histidine-tRNA ligase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650205.1 hypothetical protein Csa_010979 [Cucumis sativus]8.67e-92100Show/hide
Query:  MGRGKPCKRTSVDSLIDNKSIYHAQYRRRIPSPTSLAANAPIQKETCCFDSWICWRDIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERM
        MGRGKPCKRTSVDSLIDNKSIYHAQYRRRIPSPTSLAANAPIQKETCCFDSWICWRDIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERM
Subjt:  MGRGKPCKRTSVDSLIDNKSIYHAQYRRRIPSPTSLAANAPIQKETCCFDSWICWRDIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERM

Query:  IRGWRCEHYQWDMDISIIGVVEVMIC
        IRGWRCEHYQWDMDISIIGVVEVMIC
Subjt:  IRGWRCEHYQWDMDISIIGVVEVMIC

RVX05079.1 Histidine--tRNA ligase, chloroplastic/mitochondrial [Vitis vinifera]1.44e-0769.44Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVMIC
        + QCW+YERM RG R EHYQW+MDI  IGV EVM+C
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVMIC

XP_031738931.1 protein BONZAI 2 isoform X3 [Cucumis sativus]7.72e-0788.46Show/hide
Query:  MIRGWRCEHYQWDMDISIIGVVEVMI
        MIRGWRCEHYQWDMDISIIGVVE+ +
Subjt:  MIRGWRCEHYQWDMDISIIGVVEVMI

XP_031738934.1 protein BONZAI 2 isoform X4 [Cucumis sativus]7.70e-0788.46Show/hide
Query:  MIRGWRCEHYQWDMDISIIGVVEVMI
        MIRGWRCEHYQWDMDISIIGVVE+ +
Subjt:  MIRGWRCEHYQWDMDISIIGVVEVMI

XP_034913837.1 histidine--tRNA ligase, chloroplastic/mitochondrial [Populus alba]2.26e-0675.76Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV
        I QCW+YERM RGWR EHYQW+MDI  IGV EV
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV

TrEMBL top hitse value%identityAlignment
A0A0V0I952 Putative ovule protein1.45e-0539.24Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIE-----------------QCWQYERMIRGWRCEHYQWDMDISII
        DI NVC+EA ALIAARNES ++TM HFE+ ID+VI                   C +    + GW  EH +  + ++I+
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIE-----------------QCWQYERMIRGWRCEHYQWDMDISII

A0A438J7Y9 Histidine--tRNA ligase6.99e-0869.44Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVMIC
        + QCW+YERM RG R EHYQW+MDI  IGV EVM+C
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVMIC

A0A4S4E024 Histidine--tRNA ligase2.93e-0643.94Show/hide
Query:  AARNESRLVTMGHFEAVIDK---------VIEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVMIC
        A R      T+   E +++K          + QCW+YERM RG R EHYQW+MDI  IGV +V IC
Subjt:  AARNESRLVTMGHFEAVIDK---------VIEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVMIC

A0A5K0YF76 Histidine--tRNA ligase (Fragment)2.84e-0666.67Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV
        I QCW+YERM RG R EHYQW+MD+  IG+ EV
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV

A0A803N0L4 Uncharacterized protein7.44e-0673.53Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVM
        I QCW+YERM RG R EHYQW+MDI  IGV EVM
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEVM

SwissProt top hitse value%identityAlignment
O82413 Histidine--tRNA ligase, chloroplastic/mitochondrial2.9e-0569.7Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV
        I QCW+YERM RG R EHYQW+MD  IIGV +V
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV

Q0DHL4 ATP-dependent zinc metalloprotease FTSH 8, mitochondrial4.2e-0462.86Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVI
        DI NVC+EA ALIAAR+E   +TM HFE+ ID++I
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVI

Q84WU8 ATP-dependent zinc metalloprotease FTSH 3, mitochondrial4.9e-0539.24Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMIR-----------------GWRCEHYQWDMDISII
        DI NVC+EA ALIAAR+E   VTM HFE+ ID+VI    +  R+I                  GW  EH +  + ++I+
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMIR-----------------GWRCEHYQWDMDISII

Q8S2A7 ATP-dependent zinc metalloprotease FTSH 3, mitochondrial6.4e-0568.57Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVI
        DI NVC+EA ALIAAR+E  L+TM HFE+ ID+VI
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVI

Q8VZI8 ATP-dependent zinc metalloprotease FTSH 10, mitochondrial1.1e-0437.97Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMI-----------------RGWRCEHYQWDMDISII
        DI NVC+EA ALIAAR+E   VTM HF++ ID+VI    +  R+I                  GW  EH +  + ++I+
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMI-----------------RGWRCEHYQWDMDISII

Arabidopsis top hitse value%identityAlignment
AT1G05055.1 general transcription factor II H25.6e-0437.18Show/hide
Query:  IDNKSIYHAQYRRRIPSPTSLAANAPIQKETCCFDSWICWRDIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQ
        IDN +IYHAQYRRR+   ++ AA   IQK        I +  IV   S A A +  R     +   H EA I +  +Q
Subjt:  IDNKSIYHAQYRRRIPSPTSLAANAPIQKETCCFDSWICWRDIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQ

AT1G07510.1 FTSH protease 107.8e-0637.97Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMI-----------------RGWRCEHYQWDMDISII
        DI NVC+EA ALIAAR+E   VTM HF++ ID+VI    +  R+I                  GW  EH +  + ++I+
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMI-----------------RGWRCEHYQWDMDISII

AT2G29080.1 FTSH protease 33.5e-0639.24Show/hide
Query:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMIR-----------------GWRCEHYQWDMDISII
        DI NVC+EA ALIAAR+E   VTM HFE+ ID+VI    +  R+I                  GW  EH +  + ++I+
Subjt:  DIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMIR-----------------GWRCEHYQWDMDISII

AT3G46100.1 Histidyl-tRNA synthetase 12.0e-0669.7Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV
        I QCW+YERM RG R EHYQW+MD  IIGV +V
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV

AT5G03406.1 Class II aaRS and biotin synthetases superfamily protein1.2e-0669.7Show/hide
Query:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV
        + QCW+YERM RG R EHYQW+MD  IIGV EV
Subjt:  IEQCWQYERMIRGWRCEHYQWDMDISIIGVVEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGGAAAGCCTTGCAAGAGGACGAGTGTGGACTCCTTGATCGATAATAAGTCAATTTACCATGCTCAGTATCGAAGGCGTATTCCTTCCCCTACTTCCTTAGC
AGCCAATGCTCCAATTCAGAAGGAGACTTGCTGCTTTGACTCCTGGATTTGCTGGAGAGACATTGTGAATGTTTGCAGTGAAGCTACTGCTTTAATTGCTGCTAGAAACG
AAAGTAGATTGGTCACTATGGGACACTTTGAGGCAGTTATCGACAAAGTCATAGAGCAATGTTGGCAGTATGAGAGAATGATTAGAGGTTGGCGGTGTGAGCATTACCAA
TGGGATATGGATATCAGTATCATTGGAGTAGTTGAGGTTATGATATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGTGGAAAGCCTTGCAAGAGGACGAGTGTGGACTCCTTGATCGATAATAAGTCAATTTACCATGCTCAGTATCGAAGGCGTATTCCTTCCCCTACTTCCTTAGC
AGCCAATGCTCCAATTCAGAAGGAGACTTGCTGCTTTGACTCCTGGATTTGCTGGAGAGACATTGTGAATGTTTGCAGTGAAGCTACTGCTTTAATTGCTGCTAGAAACG
AAAGTAGATTGGTCACTATGGGACACTTTGAGGCAGTTATCGACAAAGTCATAGAGCAATGTTGGCAGTATGAGAGAATGATTAGAGGTTGGCGGTGTGAGCATTACCAA
TGGGATATGGATATCAGTATCATTGGAGTAGTTGAGGTTATGATATGTTAA
Protein sequenceShow/hide protein sequence
MGRGKPCKRTSVDSLIDNKSIYHAQYRRRIPSPTSLAANAPIQKETCCFDSWICWRDIVNVCSEATALIAARNESRLVTMGHFEAVIDKVIEQCWQYERMIRGWRCEHYQ
WDMDISIIGVVEVMIC