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CsGy3G007350 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G007350
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S acidic ribosomal protein P1-like
Genome locationGy14Chr3:6363999..6365159
RNA-Seq ExpressionCsGy3G007350
SyntenyCsGy3G007350
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]2.00e-66100Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]9.14e-6395.58Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAA VSDVESYWY LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAA GGAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_022144008.1 60S acidic ribosomal protein P1-like [Momordica charantia]8.09e-5788.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MST EIACSYAA+ILYDD I ITAEKIA LVKAA VS V+SYWY LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_022974253.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]5.12e-5588.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MS GEIACSYAALILYDDNIP+TAEK+ATLVKAA V D ESYW+ LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGA GG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.77e-6092.04Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIPITAEKIAT+VKAA V DVESYW+GLFAKLAEKR+IGDLILNVGAGGGAAVAAA PA G AGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein9.67e-67100Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like4.43e-6395.58Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAA VSDVESYWY LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAA GGAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like4.43e-6395.58Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAA VSDVESYWY LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAA GGAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1CS45 60S acidic ribosomal protein P1-like3.91e-5788.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MST EIACSYAA+ILYDD I ITAEKIA LVKAA VS V+SYWY LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1ICK4 60S acidic ribosomal protein P1-like2.48e-5588.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MS GEIACSYAALILYDDNIP+TAEK+ATLVKAA V D ESYW+ LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGA GG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-21.7e-2866.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEP
        MST GE+ACSYA +IL D+ I IT++KIATLVKAA V ++ESYW  LFAK+AEKR++ DLI+NVGAGGG   A  + A  AA GGAAAAAP  EEKK+EP
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD

P52855 60S acidic ribosomal protein P11.5e-3275.44Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAA-VAAAAPAGGAAGGGAAAAAPPPEEKKEEP
        M++GE+AC YAALIL DD I ITAEKIAT+VKAA +  VESYW  LFAKL EKR++ DLIL+VG+GGGAA VAAAAPAGGA    AAAAAP  EEKKEE 
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAA-VAAAAPAGGAAGGGAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-11.7e-2869.83Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAA    E+KK+
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-39.7e-2970.94Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEE-KK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V+ +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAAAP  EE KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEE-KK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

Q9HGV0 60S acidic ribosomal protein P17.7e-2663.72Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK
        MST E+ACSYAALIL DD + ITA+KI TL+ AAKV+DVE  W  LFAK  E + I DL+ NVG+GG AA AA    G AAG  A A A   EEKKEE K
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD+DMGF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family1.2e-2969.83Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAA    E+KK+
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family1.2e-2969.83Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAA    E+KK+
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family1.2e-2969.83Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAA    E+KK+
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family6.9e-3070.94Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEE-KK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V+ +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAAAP  EE KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEE-KK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family6.9e-3070.94Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEE-KK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V+ +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAAAP  EE KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEE-KK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAGAAATTGCCTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATATCCCTATTACCGCCGAAAAGATTGCTACGCTTGTGAAGGCAGCTAAGGTTTC
CGATGTGGAGTCTTACTGGTATGGTCTCTTTGCCAAGCTGGCTGAGAAGCGTAGCATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGTGCTGCAGTCGCTGCTG
CTGCACCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCTGCTCCACCACCGGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGT
TTGTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
AACATCCCTGCGCAGTGAAGAACGCCCGTTTCGATCTGTCTAAAATGTCGACCGGAGAAATTGCCTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATATCCCTATT
ACCGCCGAAAAGATTGCTACGCTTGTGAAGGCAGCTAAGGTTTCCGATGTGGAGTCTTACTGGTATGGTCTCTTTGCCAAGCTGGCTGAGAAGCGTAGCATTGGAGATTT
GATCCTCAATGTTGGGGCTGGTGGCGGTGCTGCAGTCGCTGCTGCTGCACCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCTGCTCCACCACCGGAAGAGAAAA
AGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAGGTCAAGATTTGGGATCGCATATTTTGTTCTAGGTTTATTATCTTTTTAATGCCC
GAGGTGGCCCTTGTTATTTTACAGATACGTAGTTTTGGACGTCCAAACAAATTCGCGATAAGTTTTGATTTGAATGTGATCTGATTTCATCTTTTCTG
Protein sequenceShow/hide protein sequence
MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFS
LFD