CuGenDBv2

Gene ID	CsGy3G007785
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	eukaryotic translation initiation factor 5B
Genome location	Gy14Chr3:6648053..6656293
RNA-Seq Expression	CsGy3G007785
Synteny	CsGy3G007785
Gene Ontology terms	GO:0001763 - morphogenesis of a branching structure (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011650662.1 uncharacterized protein LOC105434808 [Cucumis sativus]

1.06e-105

98.04

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDEL
        MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGD+IIVDNAEDEDDDEL
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDEL

Query:  IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELLCWF
        IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIR+RVTLA+LLCWF
Subjt:  IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELLCWF

XP_016898944.1 PREDICTED: uncharacterized protein LOC103483155 [Cucumis melo]

1.21e-67

87.7

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Query:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV
        +  KTQGLLA+QVDEFVDDWRIN+GRR TIFFMGFEK+SKTKTY NLRKEGKR+N D+IIVDNA DEDDDELIPLMSTTFQNNFDD+NGEFCTEFEKSQV
Subjt:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV

Query:  VLAIQRHVAQRIRRRVTLAELL
        V+AIQRHVAQRIRRRVTLA+LL
Subjt:  VLAIQRHVAQRIRRRVTLAELL

XP_023521995.1 bystin-like, partial [Cucurbita pepo subsp. pepo]

3.00e-54

67.52

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK ESI KEAK QGL A+QVDE VD   DWRIN GRRLTIFFMGF+KSSK++ Y    FNL KEGK D  D    D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL
        D+D+D L PLM+TTF NNFDD NGEFCTEF+KS+VV+AI+R+VAQR+RRRVTLA+LL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL

XP_023540247.1 uncharacterized protein LOC111800673 [Cucurbita pepo subsp. pepo]

6.91e-55

68.79

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK    SRKK ESITKEAK QGL A+QVDE VD   DWRIN GRRLTIFFMGF+KSSK+  Y    FNL KEGKRD    I+ D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL
        D+D+D+L PLM+TTF NNFDD NGEFCT+F+KS+VV+AI+RHVA R+RRRVTLA+LL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL

XP_038903821.1 protein TILLER ANGLE CONTROL 1-like [Benincasa hispida]

9.10e-80

81.7

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNG--DLIIVDNAEDEDDD
        MFNWVHTKFHYNPLK GN SRKKGESI K  KTQGLL +QVDEFVDDW+INNGRRLTI FMGFEKSSK + YFNLRKEGKRDN   D+IIVDN  DE+DD
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNG--DLIIVDNAEDEDDD

Query:  --ELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAEL
          EL PLM+TTFQ NFD++NGEFCTEFEKSQVV+AIQRHVAQRIRRRVTLA+L
Subjt:  --ELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAEL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSI3 uncharacterized protein LOC103483155

5.84e-68

87.7

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Query:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV
        +  KTQGLLA+QVDEFVDDWRIN+GRR TIFFMGFEK+SKTKTY NLRKEGKR+N D+IIVDNA DEDDDELIPLMSTTFQNNFDD+NGEFCTEFEKSQV
Subjt:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV

Query:  VLAIQRHVAQRIRRRVTLAELL
        V+AIQRHVAQRIRRRVTLA+LL
Subjt:  VLAIQRHVAQRIRRRVTLAELL

A0A6J1D0S4 uncharacterized protein LOC111016244

4.50e-30

52.76

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Query:  MFNWVHTKFHYNPLK---DGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE
        MFNW+H+ FHYNPLK     N  RK  +S+ K         +++ + ++DWRIN GRRLTI  +GFE+SSK + Y     NL+KEGKR   D ++ D+  
Subjt:  MFNWVHTKFHYNPLK---DGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFC
        D+DDDEL PLM+TTFQNNFDDS GEFC
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFC

A0A6J1EIR9 uncharacterized protein LOC111434343

1.74e-49

66.88

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK  SI KEAK QGL ++QVDE VD   DWRIN GRRLTIFFMGF+KSSK++ Y    FNL KEGK+D  D    DN  
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL
        D D+D L PLM+TTF NNFDD NGEFCTEF+KS+VV+AI+RHVA R+RRRVTLA+LL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL

A0A6J1ICK1 uncharacterized protein LOC111473621

8.75e-51

64.33

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK ES+ KEAK QGL A+Q+DE VD   DWRIN GRRLTIFFMGF+KSSK++ Y    FNL KE KRD   ++  D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL
        D+D+D L  LM+TTF NNFDD NGEFCTEF+KS+VV+AI+R++AQR+RRRVTLA+LL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL

A0A6J1ICL7 uncharacterized protein LOC111474406

1.79e-50

65.61

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Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK ES+ KEAK QGL A+Q+DE VD   DWRIN GRRLTIFFMGF+KSSK++ Y    FNL KE KRD     IVD+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVD---DWRINNGRRLTIFFMGFEKSSKTKTY----FNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL
        D+D+D L  LM+TTF NNFDD NGEFCTEF+KS+VV+AI+R++AQR+RRRVTLA+LL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELL

SwissProt top hits

e value

%identity

Alignment

U3MMQ4 Protein TILLER ANGLE CONTROL 1

1.8e-06

32.89

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Query:  MFNWVHTKFHYNPLKDGNTSR-KKGESITKEAKTQGLLAE----QVDEFVDDWRINNGRRLTIFFMGFE---KSSKTKTYFNLR-KEGKRDNGDLIIVDN
        +FNWVH + H   +KDG     KK E  T +  TQ  L +     VD  +D WR      LTI   GF+    S+    YF L  +E  +++       N
Subjt:  MFNWVHTKFHYNPLKDGNTSR-KKGESITKEAKTQGLLAE----QVDEFVDDWRINNGRRLTIFFMGFE---KSSKTKTYFNLR-KEGKRDNGDLIIVDN

Query:  AEDEDDD----------ELIPLMSTTFQNNFDDSNGEFCTEFEK-SQVVLAI
         +D+DDD          EL PLM TTF+++F+D    F    +K + V+L +
Subjt:  AEDEDDD----------ELIPLMSTTFQNNFDDSNGEFCTEFEK-SQVVLAI

Arabidopsis top hits

e value

%identity

Alignment

AT2G46640.2 unknown protein

6.8e-04

27.43

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Query:  MFNWVHTKFHYNPLKDG---NTSRKKGESITKEAKTQGLLAEQVD--EFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRD-----NGDL--II
        +FNWV  K H N +KDG   N  +K+ E I++  K    + +QV   + +D+W       LTI   GF+         N ++E + D     +GDL  ++
Subjt:  MFNWVHTKFHYNPLKDG---NTSRKKGESITKEAKTQGLLAEQVD--EFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRD-----NGDL--II

Query:  VDNA----EDEDDDELIPLMSTTFQNNFDDSN----------GEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAEL
        +D +     D++ D LI + +  + ++ D  N          G   T  E   V  A +  +  + ++R TLAEL
Subjt:  VDNA----EDEDDDELIPLMSTTFQNNFDDSN----------GEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAEL

Sequences

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CDS sequence

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ATGTTCAACTGGGTTCACACGAAGTTCCACTACAACCCTCTTAAAGATGGAAATACGTCAAGAAAGAAGGGCGAATCTATCACGAAGGAGGCAAAAACACAAGGATTATT
AGCAGAACAAGTCGATGAATTTGTTGATGATTGGAGGATCAACAATGGCCGCCGTCTTACCATTTTCTTTATGGGATTTGAGAAGTCATCAAAAACCAAAACTTATTTCA
ATTTGAGGAAGGAGGGAAAGAGAGATAATGGAGATCTTATTATTGTTGATAATGCTGAGGACGAGGATGATGATGAGTTGATCCCATTAATGTCGACCACATTTCAGAAC
AACTTTGACGATAGTAATGGTGAATTTTGTACAGAATTCGAGAAGTCTCAAGTAGTCTTGGCTATTCAACGACATGTCGCTCAAAGAATCCGCCGGAGAGTCACACTAGC
GGAACTGCTTTGTTGGTTTTAA

mRNA sequence

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ACCAAATCGGAGAAAGAAAACGTTGATGAAAGCCATGGGCGTCACTGCGAAGTGCGAAGTTGCCGCCGATTATGGCTCATGGCCGCTCGTCACCATTCGAGCACCGTGAC
CCTCAGCCGTCAATGCGTTGCTCCTCGGCTCCCTCAAAGCACACTATCTCGAGATATATCTAAAATGTCGTTGTCTCCGGTGCACTAGATGGTAGTGGGCCGGTGCTTAC
TAGGAACTACGGTGAAGAAGCAGTTAAGGTTTAGGAAATGCCATTTGCCATTGTTATTCTGGGAGGTGGAGGAGACGATGAAATTAGTCGGTAATGTACATTTTCTTTGT
GTGTTATATCCCGATGCATTACGTATCCATTCCGTTTCCATGAGAATCTAAGTCGAACCCTAGGGGTTTCACGTTGTTCTGCTCGGCTTTAATGGTTTCGTGTTCAACTT
AAACTGAACAAGAACAACCCAACCCATTTGGTAATGTACTTTTCTGAGTTGTTGGTTTGGTTGGCAGAGATTTAGTTGAGAAAATGCGAGACATTTAAAAGGGTCTCTCT
TTCCATTCTTCAAGCACGCCATGATGTGAAAGAAGACCAAAATTTTATTTGGTCGTTCACTGTTCAGACCAGTTGAATCATTTATCAAGGAGCACAAGAACACTCCACAT
AATCGTCCTAATCAGTTAGGTGTAGCAGGTAAAGAAAACAAGTGGAAATAAGGGATGAAAACAGGTGCGTATTTCTTAAATAAGCTTATGGAGGCCGTTCCAGAGCCATG
TTCAACTGGGTTCACACGAAGTTCCACTACAACCCTCTTAAAGATGGAAATACGTCAAGAAAGAAGGGCGAATCTATCACGAAGGAGGCAAAAACACAAGGATTATTAGC
AGAACAAGTCGATGAATTTGTTGATGATTGGAGGATCAACAATGGCCGCCGTCTTACCATTTTCTTTATGGGATTTGAGAAGTCATCAAAAACCAAAACTTATTTCAATT
TGAGGAAGGAGGGAAAGAGAGATAATGGAGATCTTATTATTGTTGATAATGCTGAGGACGAGGATGATGATGAGTTGATCCCATTAATGTCGACCACATTTCAGAACAAC
TTTGACGATAGTAATGGTGAATTTTGTACAGAATTCGAGAAGTCTCAAGTAGTCTTGGCTATTCAACGACATGTCGCTCAAAGAATCCGCCGGAGAGTCACACTAGCGGA
ACTGCTTTGTTGGTTTTAAAACAAAGGATCTGTAAAATCTCACGCACTCTTCTTGAAGAAAACAAAGATAAATACTTTGTAAGATATATTGCCAAGAGGGAGAGAATGTA
ACAAGTGAAAACTACATAAGTTGCAGAAGAAAAAATAAGTTGAGGTATACAAGAGATTGCATCTAAGATCCAATGAAAAAAAAAACAACTAAACTAACAGCGCCTTTTAA
ACTTTTCAGGTAACATAATTTATATGAATCGAGTTTATGAGTTCCTTGTTAGACCAGGTCTATGAGTTTCTTTCCATAACGTGGCATTAGGGGTGGAACTTGGTGCCATT
TGGTGGAAAATGTGGAC

Protein sequence

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MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQN
NFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLAELLCWF

CsGy3G007785 (gene) of Cucumber (Gy14) v2.1 genome