; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy3G008893 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy3G008893
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
Genome locationGy14Chr3:7291066..7291562
RNA-Seq ExpressionCsGy3G008893
SyntenyCsGy3G008893
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048969.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.25e-0456.25Show/hide
Query:  RPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQ
        RP GHCNLFFHVN+VIVS+WK    ++   ++
Subjt:  RPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQ
KGN56517.1 hypothetical protein Csa_011570 [Cucumis sativus]6.52e-3898.31Show/hide
Query:  MKRNFATLGPLSSGHLLPGPSITGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG
        MKRNFATLGPLSSGHLLPGPS TGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG
Subjt:  MKRNFATLGPLSSGHLLPGPSITGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG
XP_031738549.1 16 kDa phloem protein 2 isoform X1 [Cucumis sativus]4.15e-14100Show/hide
Query:  RPVGHCNLFFHVNAVIVSDWKTDGCKEICQ
        RPVGHCNLFFHVNAVIVSDWKTDGCKEICQ
Subjt:  RPVGHCNLFFHVNAVIVSDWKTDGCKEICQ
TrEMBL top hitse value%identityAlignment
A0A0A0L7G8 Uncharacterized protein3.16e-3898.31Show/hide
Query:  MKRNFATLGPLSSGHLLPGPSITGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG
        MKRNFATLGPLSSGHLLPGPS TGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG
Subjt:  MKRNFATLGPLSSGHLLPGPSITGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG
A0A5A7U647 Putative pentatricopeptide repeat-containing protein1.09e-0456.25Show/hide
Query:  RPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQ
        RP GHCNLFFHVN+VIVS+WK    ++   ++
Subjt:  RPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCGTAACAGAACTTACATGAAAAGGAATTTTGCTACCTTAGGACCATTATCATCTGGTCACCTACTTCCTGGACCTTCCATCACTGGACAGATTCGCCCGGTGGG
TCACTGCAACCTCTTCTTCCATGTCAATGCTGTTATTGTATCCGATTGGAAAACTGATGGATGCAAGGAAATTTGTCAGGTTCAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCGTAACAGAACTTACATGAAAAGGAATTTTGCTACCTTAGGACCATTATCATCTGGTCACCTACTTCCTGGACCTTCCATCACTGGACAGATTCGCCCGGTGGG
TCACTGCAACCTCTTCTTCCATGTCAATGCTGTTATTGTATCCGATTGGAAAACTGATGGATGCAAGGAAATTTGTCAGGTTCAAGGCTAA
Protein sequenceShow/hide protein sequence
MVRNRTYMKRNFATLGPLSSGHLLPGPSITGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG